| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_016567 |
Definition |
Vibrio phage SIO-2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
81184 |
Host Name |
Vibrio sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
115 |
%GC |
44.97 |
Number of singletons |
40 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_004957563.1 | NC_016567_p70 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | -1 | 40883 | 42904 |
| YP_004957508.1 | NC_016567_p15 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 7178 | 7612 |
| YP_004957603.1 | NC_016567_p110 | protein of an unannotated phage | phrog_22176 | unknown function | unknown function | -1 | 78866 | 79138 |
| YP_004957557.1 | NC_016567_p64 | protein of an unannotated phage | phrog_23332 | unknown function | unknown function | -1 | 36925 | 37407 |
| YP_004957527.1 | NC_016567_p34 | protein of an unannotated phage | phrog_29623 | unknown function | unknown function | -1 | 16286 | 16540 |
| YP_004957584.1 | NC_016567_p91 | protein of an unannotated phage | phrog_22220 | unknown function | unknown function | -1 | 61033 | 61335 |
| YP_004957521.1 | NC_016567_p28 | protein of an unannotated phage | phrog_22200 | unknown function | unknown function | -1 | 13383 | 13586 |
| YP_004957505.1 | NC_016567_p12 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 5993 | 6328 |
| YP_004957494.1 | NC_016567_p1 | protein of an unannotated phage | phrog_19411 | unknown function | unknown function | -1 | 133 | 540 |
| YP_004957497.1 | NC_016567_p4 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 1766 | 2356 |
| YP_004957507.1 | NC_016567_p14 | protein of an unannotated phage | phrog_4826 | unknown function | unknown function | -1 | 6666 | 7169 |
| YP_004957518.1 | NC_016567_p25 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 11920 | 12690 |
| YP_004957530.1 | NC_016567_p37 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 17967 | 19661 |
| YP_004957572.1 | NC_016567_p79 | protein of an unannotated phage | phrog_19880 | transcriptional regulator | transcription regulation | -1 | 49934 | 50344 |
| YP_004957528.1 | NC_016567_p35 | protein of an unannotated phage | phrog_27014 | unknown function | unknown function | -1 | 16627 | 17220 |
| YP_004957504.1 | NC_016567_p11 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 5521 | 6000 |
| YP_004957538.1 | NC_016567_p45 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 23446 | 24123 |
| YP_004957600.1 | NC_016567_p107 | protein of an unannotated phage | phrog_26068 | unknown function | unknown function | -1 | 75984 | 76319 |
| YP_004957501.1 | NC_016567_p8 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 3495 | 3848 |
| YP_004957575.1 | NC_016567_p82 | protein of an unannotated phage | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 52844 | 53830 |
| YP_004957516.1 | NC_016567_p23 | protein of an unannotated phage | phrog_23600 | unknown function | unknown function | -1 | 11250 | 11582 |
| YP_004957519.1 | NC_016567_p26 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 12700 | 13152 |
| YP_004957606.1 | NC_016567_p113 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 79996 | 80283 |
| YP_004957539.1 | NC_016567_p46 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 24188 | 24685 |
| YP_004957532.1 | NC_016567_p39 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 20273 | 20758 |
| YP_004957534.1 | NC_016567_p41 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 21200 | 22057 |
| YP_004957526.1 | NC_016567_p33 | protein of an unannotated phage | phrog_38389 | unknown function | unknown function | -1 | 16033 | 16272 |
| YP_004957587.1 | NC_016567_p94 | protein of an unannotated phage | phrog_22251 | unknown function | unknown function | -1 | 63131 | 64030 |
| YP_004957555.1 | NC_016567_p62 | protein of an unannotated phage | phrog_20946 | unknown function | unknown function | -1 | 35392 | 36426 |
| YP_004957553.1 | NC_016567_p60 | protein of an unannotated phage | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32169 | 34523 |
| YP_004957510.1 | NC_016567_p17 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 8538 | 8804 |
| YP_004957559.1 | NC_016567_p66 | protein of an unannotated phage | phrog_34208 | unknown function | unknown function | -1 | 39483 | 39965 |
| YP_004957582.1 | NC_016567_p89 | protein of an unannotated phage | phrog_1501 | unknown function | unknown function | -1 | 60388 | 60819 |
| YP_004957498.1 | NC_016567_p5 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 2368 | 2637 |
| YP_004957585.1 | NC_016567_p92 | protein of an unannotated phage | phrog_24905 | unknown function | unknown function | -1 | 61332 | 61841 |
| YP_004957512.1 | NC_016567_p19 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 9215 | 9667 |
| YP_004957511.1 | NC_016567_p18 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 8797 | 9225 |
| YP_004957578.1 | NC_016567_p85 | protein of an unannotated phage | phrog_22850 | unknown function | unknown function | -1 | 56042 | 56620 |
| YP_004957502.1 | NC_016567_p9 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 3991 | 5019 |
| YP_004957546.1 | NC_016567_p53 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 26797 | 27060 |
| YP_004957543.1 | NC_016567_p50 | protein of an unannotated phage | phrog_27857 | unknown function | unknown function | -1 | 25756 | 26052 |
| YP_004957541.1 | NC_016567_p48 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 24990 | 25448 |
| YP_004957520.1 | NC_016567_p27 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 13145 | 13399 |
| YP_004957531.1 | NC_016567_p38 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 19794 | 20252 |
| YP_004957558.1 | NC_016567_p65 | protein of an unannotated phage | phrog_18609 | kinase | other | -1 | 37407 | 39452 |
| YP_004957514.1 | NC_016567_p21 | protein of an unannotated phage | phrog_26169 | unknown function | unknown function | -1 | 10003 | 10320 |
| YP_004957529.1 | NC_016567_p36 | protein of an unannotated phage | phrog_25229 | unknown function | unknown function | -1 | 17285 | 17881 |
| YP_004957591.1 | NC_016567_p98 | protein of an unannotated phage | phrog_5260 | tail protein | tail | -1 | 69738 | 70172 |
| YP_004957549.1 | NC_016567_p56 | protein of an unannotated phage | phrog_25296 | unknown function | unknown function | -1 | 27935 | 28363 |
| YP_004957566.1 | NC_016567_p73 | protein of an unannotated phage | phrog_22433 | unknown function | unknown function | -1 | 44431 | 45186 |
| YP_004957499.1 | NC_016567_p6 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 2701 | 3177 |
| YP_004957570.1 | NC_016567_p77 | protein of an unannotated phage | phrog_2002 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 48001 | 48456 |
| YP_004957536.1 | NC_016567_p43 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 22912 | 23196 |
| YP_004957564.1 | NC_016567_p71 | protein of an unannotated phage | phrog_25054 | unknown function | unknown function | -1 | 42885 | 43682 |
| YP_004957581.1 | NC_016567_p88 | protein of an unannotated phage | phrog_6637 | unknown function | unknown function | -1 | 59834 | 60385 |
| YP_004957573.1 | NC_016567_p80 | protein of an unannotated phage | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 50419 | 51846 |
| YP_004957593.1 | NC_016567_p100 | protein of an unannotated phage | phrog_26611 | unknown function | unknown function | -1 | 71095 | 71553 |
| YP_004957576.1 | NC_016567_p83 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 53848 | 54471 |
| YP_004957601.1 | NC_016567_p108 | protein of an unannotated phage | phrog_36387 | unknown function | unknown function | -1 | 76387 | 78051 |
| YP_004957547.1 | NC_016567_p54 | protein of an unannotated phage | phrog_25018 | unknown function | unknown function | -1 | 27062 | 27358 |
| YP_004957522.1 | NC_016567_p29 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 13699 | 14691 |
| YP_004957537.1 | NC_016567_p44 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 23196 | 23453 |
| YP_004957540.1 | NC_016567_p47 | protein of an unannotated phage | phrog_2308 | unknown function | unknown function | -1 | 24689 | 25003 |
| YP_004957561.1 | NC_016567_p68 | protein of an unannotated phage | phrog_35935 | unknown function | unknown function | -1 | 40263 | 40532 |
| YP_004957595.1 | NC_016567_p102 | protein of an unannotated phage | phrog_23277 | unknown function | unknown function | -1 | 72008 | 72631 |
| YP_004957551.1 | NC_016567_p58 | protein of an unannotated phage | phrog_30193 | unknown function | unknown function | -1 | 29224 | 30297 |
| YP_004957565.1 | NC_016567_p72 | protein of an unannotated phage | phrog_27675 | unknown function | unknown function | -1 | 43698 | 44360 |
| YP_004957542.1 | NC_016567_p49 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 25507 | 25692 |
| YP_004957596.1 | NC_016567_p103 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 72641 | 72970 |
| YP_004957525.1 | NC_016567_p32 | protein of an unannotated phage | phrog_28940 | unknown function | unknown function | -1 | 15616 | 15972 |
| YP_004957523.1 | NC_016567_p30 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 14775 | 15131 |
| YP_004957562.1 | NC_016567_p69 | protein of an unannotated phage | phrog_25261 | unknown function | unknown function | -1 | 40630 | 40878 |
| YP_004957496.1 | NC_016567_p3 | protein of an unannotated phage | phrog_4750 | unknown function | unknown function | -1 | 871 | 1698 |
| YP_004957533.1 | NC_016567_p40 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 20760 | 21197 |
| YP_004957524.1 | NC_016567_p31 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 15131 | 15619 |
| YP_004957571.1 | NC_016567_p78 | protein of an unannotated phage | phrog_25619 | unknown function | unknown function | -1 | 49514 | 49930 |
| YP_004957552.1 | NC_016567_p59 | protein of an unannotated phage | phrog_12 | portal protein | head and packaging | -1 | 30303 | 32168 |
| YP_004957588.1 | NC_016567_p95 | protein of an unannotated phage | phrog_24675 | unknown function | unknown function | -1 | 64040 | 65014 |
| YP_004957503.1 | NC_016567_p10 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 5091 | 5420 |
| YP_004957594.1 | NC_016567_p101 | protein of an unannotated phage | phrog_26 | tail completion or Neck1 protein | connector | -1 | 71550 | 72011 |
| YP_004957554.1 | NC_016567_p61 | protein of an unannotated phage | phrog_25950 | unknown function | unknown function | -1 | 34535 | 35389 |
| YP_004957556.1 | NC_016567_p63 | protein of an unannotated phage | phrog_17568 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 36456 | 36932 |
| YP_004957598.1 | NC_016567_p105 | protein of an unannotated phage | phrog_27672 | unknown function | unknown function | -1 | 74081 | 75256 |
| YP_004957589.1 | NC_016567_p96 | protein of an unannotated phage | phrog_4408 | unknown function | unknown function | -1 | 65024 | 65407 |
| YP_004957544.1 | NC_016567_p51 | protein of an unannotated phage | phrog_8162 | unknown function | unknown function | -1 | 26049 | 26537 |
| YP_004957605.1 | NC_016567_p112 | protein of an unannotated phage | phrog_36462 | unknown function | unknown function | -1 | 79682 | 79984 |
| YP_004957607.1 | NC_016567_p114 | protein of an unannotated phage | phrog_22395 | unknown function | unknown function | -1 | 80453 | 80686 |
| YP_004957548.1 | NC_016567_p55 | protein of an unannotated phage | phrog_24661 | unknown function | unknown function | -1 | 27434 | 27898 |
| YP_004957602.1 | NC_016567_p109 | protein of an unannotated phage | phrog_631 | unknown function | unknown function | -1 | 78044 | 78856 |
| YP_004957597.1 | NC_016567_p104 | protein of an unannotated phage | phrog_1623 | virion structural protein | head and packaging | -1 | 73054 | 73998 |
| YP_004957583.1 | NC_016567_p90 | protein of an unannotated phage | phrog_5076 | unknown function | unknown function | -1 | 60809 | 61036 |
| YP_004957579.1 | NC_016567_p86 | protein of an unannotated phage | phrog_24312 | unknown function | unknown function | -1 | 56623 | 58101 |
| YP_004957577.1 | NC_016567_p84 | protein of an unannotated phage | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 54540 | 56045 |
| YP_004957509.1 | NC_016567_p16 | protein of an unannotated phage | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 7609 | 8445 |
| YP_004957515.1 | NC_016567_p22 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 10404 | 11192 |
| YP_004957599.1 | NC_016567_p106 | protein of an unannotated phage | phrog_15223 | protease | other | -1 | 75253 | 75867 |
| YP_004957592.1 | NC_016567_p99 | protein of an unannotated phage | phrog_807 | major tail protein with Ig-like domain | tail | -1 | 70250 | 71047 |
| YP_004957590.1 | NC_016567_p97 | protein of an unannotated phage | phrog_23013 | tail length tape measure protein | tail | -1 | 65404 | 69537 |
| YP_004957495.1 | NC_016567_p2 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 527 | 865 |
| YP_004957604.1 | NC_016567_p111 | protein of an unannotated phage | phrog_22722 | unknown function | unknown function | -1 | 79138 | 79668 |
| YP_004957535.1 | NC_016567_p42 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 22505 | 22912 |
| YP_004957545.1 | NC_016567_p52 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 26528 | 26800 |
| YP_004957568.1 | NC_016567_p75 | protein of an unannotated phage | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 46456 | 47022 |
| YP_004957513.1 | NC_016567_p20 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 9660 | 10022 |
| YP_004957574.1 | NC_016567_p81 | protein of an unannotated phage | phrog_17226 | unknown function | unknown function | -1 | 51891 | 52832 |
| YP_004957500.1 | NC_016567_p7 | protein of an unannotated phage | phrog_27069 | unknown function | unknown function | -1 | 3155 | 3493 |
| YP_004957567.1 | NC_016567_p74 | protein of an unannotated phage | phrog_17202 | unknown function | unknown function | -1 | 45341 | 46198 |
| YP_004957550.1 | NC_016567_p57 | protein of an unannotated phage | phrog_359 | DNA methyltransferase | other | -1 | 28569 | 29216 |
| YP_004957580.1 | NC_016567_p87 | protein of an unannotated phage | phrog_10401 | ATPase | other | -1 | 58468 | 59709 |
| YP_004957517.1 | NC_016567_p24 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 11678 | 11923 |
| YP_004957569.1 | NC_016567_p76 | protein of an unannotated phage | phrog_2506 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 47019 | 48011 |
| YP_004957560.1 | NC_016567_p67 | protein of an unannotated phage | phrog_27093 | unknown function | unknown function | -1 | 39955 | 40203 |
| YP_004957506.1 | NC_016567_p13 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 6316 | 6660 |
| YP_004957608.1 | NC_016567_p115 | protein of an unannotated phage | phrog_19411 | unknown function | unknown function | -1 | 80728 | 81135 |
| YP_004957586.1 | NC_016567_p93 | protein of an unannotated phage | phrog_24698 | unknown function | unknown function | -1 | 61842 | 63128 |