Genomic map of Nocardia phage NBR1 (NC_016569)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_016569
Definition
Nocardia phage NBR1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
46140
Host Name
Nocardia brasiliensis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
68
%GC
67.5
Number of singletons
34
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_004957686.1 NC_016569_p51 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 36057 36362
YP_004957658.1 NC_016569_p23 tape measure protein phrog_4197 tail length tape measure protein tail 1 13557 17099
YP_004957693.1 NC_016569_p58 hypothetical protein singleton unknown function unknown function -1 39763 40950
YP_004957637.1 NC_016569_p2 hypothetical protein phrog_2293 unknown function unknown function 1 916 1125
YP_004957657.1 NC_016569_p22 hypothetical protein phrog_2624 tail assembly chaperone tail 1 12776 13552
YP_004957647.1 NC_016569_p12 hypothetical protein singleton unknown function unknown function 1 8379 8738
YP_004957655.1 NC_016569_p20 hypothetical protein singleton unknown function unknown function 1 12184 12384
YP_004957636.1 NC_016569_p1 terminase small subunit phrog_83 terminase small subunit head and packaging 1 270 818
YP_004957692.1 NC_016569_p57 hypothetical protein singleton unknown function unknown function -1 39566 39766
YP_004957643.1 NC_016569_p8 major capsid protein phrog_10 major head protein head and packaging 1 5836 7131
YP_004957667.1 NC_016569_p32 hypothetical protein phrog_2689 minor tail protein tail 1 23529 24983
YP_004957670.1 NC_016569_p35 hypothetical protein singleton unknown function unknown function 1 26304 26558
YP_004957671.1 NC_016569_p36 hypothetical protein singleton unknown function unknown function 1 26644 26838
YP_004957685.1 NC_016569_p50 hypothetical protein phrog_636 unknown function unknown function -1 35279 35950
YP_004957684.1 NC_016569_p49 hypothetical protein singleton unknown function unknown function -1 34984 35241
YP_004957642.1 NC_016569_p7 GIY-YIG catalytic domain protein singleton unknown function unknown function 1 5227 5739
YP_004957682.1 NC_016569_p47 primase/polymerase phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 32474 34741
YP_004957683.1 NC_016569_p48 hypothetical protein singleton unknown function unknown function -1 34781 34981
YP_004957694.1 NC_016569_p59 hypothetical protein singleton unknown function unknown function -1 40947 41408
YP_004957666.1 NC_016569_p31 hypothetical protein singleton unknown function unknown function 1 23320 23532
YP_004957676.1 NC_016569_p41 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 28438 29478
YP_004957700.1 NC_016569_p65 holliday junction resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 44129 44707
YP_004957653.1 NC_016569_p18 hypothetical protein singleton unknown function unknown function 1 11165 11542
YP_004957687.1 NC_016569_p52 hypothetical protein singleton unknown function unknown function -1 36451 36636
YP_004957688.1 NC_016569_p53 hypothetical protein singleton unknown function unknown function -1 36633 36986
YP_004957638.1 NC_016569_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1130 2902
YP_004957644.1 NC_016569_p9 hypothetical protein singleton unknown function unknown function 1 7238 7492
YP_004957645.1 NC_016569_p10 hypothetical protein phrog_442 head-tail adaptor connector 1 7499 8071
YP_004957681.1 NC_016569_p46 hypothetical protein singleton unknown function unknown function -1 32326 32457
YP_004957680.1 NC_016569_p45 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 30549 32324
YP_004957690.1 NC_016569_p55 hypothetical protein singleton unknown function unknown function -1 37350 37583
YP_004957665.1 NC_016569_p30 tail protein phrog_4120 minor tail protein tail 1 22253 23320
YP_004957697.1 NC_016569_p62 hypothetical protein singleton unknown function unknown function -1 42547 43008
YP_004957639.1 NC_016569_p4 hypothetical protein phrog_6750 unknown function unknown function 1 2902 3186
YP_004957659.1 NC_016569_p24 minor tail protein phrog_106 minor tail protein tail 1 17096 17983
YP_004957696.1 NC_016569_p61 hypothetical protein singleton unknown function unknown function -1 42234 42557
YP_004957691.1 NC_016569_p56 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 37616 39418
YP_004957678.1 NC_016569_p43 hypothetical protein singleton unknown function unknown function -1 29689 29979
YP_004957641.1 NC_016569_p6 prohead protease phrog_80 head maturation protease head and packaging 1 4535 5230
YP_004957660.1 NC_016569_p25 minor tail protein phrog_110 minor tail protein tail 1 17985 19712
YP_004957654.1 NC_016569_p19 hypothetical protein phrog_2804 virion structural protein head and packaging 1 11539 12171
YP_004957703.1 NC_016569_p68 hypothetical protein singleton unknown function unknown function 1 45733 45852
YP_004957640.1 NC_016569_p5 portal protein phrog_12 portal protein head and packaging 1 3189 4538
YP_004957652.1 NC_016569_p17 hypothetical protein phrog_819 tail protein tail 1 10597 11160
YP_004957651.1 NC_016569_p16 hypothetical protein singleton unknown function unknown function 1 10303 10593
YP_004957672.1 NC_016569_p37 hypothetical protein singleton unknown function unknown function 1 26819 27043
YP_004957677.1 NC_016569_p42 hypothetical protein singleton unknown function unknown function -1 29471 29686
YP_004957702.1 NC_016569_p67 hypothetical protein phrog_6439 unknown function unknown function 1 45212 45517
YP_004957689.1 NC_016569_p54 hypothetical protein singleton unknown function unknown function -1 37147 37350
YP_004957695.1 NC_016569_p60 hypothetical protein phrog_102 endolysin lysis -1 41458 42237
YP_004957656.1 NC_016569_p21 hypothetical protein phrog_37902 unknown function unknown function 1 12429 12776
YP_004957664.1 NC_016569_p29 hypothetical protein singleton unknown function unknown function -1 21680 22201
YP_004957646.1 NC_016569_p11 hypothetical protein phrog_501 head closure Hc1 connector 1 8068 8391
YP_004957701.1 NC_016569_p66 hypothetical protein singleton unknown function unknown function 1 44704 45207
YP_004957663.1 NC_016569_p28 hypothetical protein phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 21358 21690
YP_004957673.1 NC_016569_p38 hypothetical protein phrog_3798 unknown function unknown function 1 27040 27462
YP_004957661.1 NC_016569_p26 hypothetical protein singleton unknown function unknown function 1 19746 20366
YP_004957648.1 NC_016569_p13 hypothetical protein phrog_123 tail terminator connector 1 8738 9163
YP_004957650.1 NC_016569_p15 hypothetical protein phrog_1126 unknown function unknown function 1 9953 10306
YP_004957669.1 NC_016569_p34 lysin phrog_2998 endolysin lysis 1 25206 26285
YP_004957649.1 NC_016569_p14 major tail protein phrog_476 major tail protein tail 1 9178 9867
YP_004957668.1 NC_016569_p33 hypothetical protein singleton unknown function unknown function 1 24984 25190
YP_004957675.1 NC_016569_p40 hypothetical protein phrog_870 unknown function unknown function -1 27905 28402
YP_004957698.1 NC_016569_p63 hypothetical protein singleton unknown function unknown function -1 43005 43244
YP_004957662.1 NC_016569_p27 hypothetical protein singleton unknown function unknown function -1 20562 20867
YP_004957674.1 NC_016569_p39 hypothetical protein singleton unknown function unknown function -1 27508 27849
YP_004957699.1 NC_016569_p64 hypothetical protein singleton unknown function unknown function 1 43662 44132
YP_004957679.1 NC_016569_p44 hypothetical protein singleton unknown function unknown function -1 29979 30479