Genomic map of Pseudomonas phage phi297 (NC_016762)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_016762
Definition
Pseudomonas phage phi297, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
49135
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
62.14
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_005098075.1 NC_016762_p48 hypothetical protein phrog_2138 unknown function unknown function 1 30720 30911
YP_005098056.1 NC_016762_p29 hypothetical protein phrog_35 transcriptional repressor transcription regulation 1 17613 17825
YP_005098048.1 NC_016762_p21 global regulatory protein phrog_5527 transcriptional regulator transcription regulation -1 13397 13768
YP_005098054.1 NC_016762_p27 ParA protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism -1 15492 16544
YP_005098031.1 NC_016762_p4 hypothetical protein phrog_6604 unknown function unknown function -1 2055 2303
YP_005098058.1 NC_016762_p31 hypothetical protein singleton unknown function unknown function 1 18256 18378
YP_005098032.1 NC_016762_p5 hypothetical protein phrog_4894 unknown function unknown function -1 2386 2736
YP_005098046.1 NC_016762_p19 hypothetical protein phrog_6125 unknown function unknown function -1 12666 12818
YP_005098028.1 NC_016762_p1 hypothetical protein phrog_7614 unknown function unknown function -1 49062 49135
YP_005098028.1 NC_016762_p1 hypothetical protein phrog_7614 unknown function unknown function -1 1 397
YP_005098029.1 NC_016762_p2 hypothetical protein phrog_3956 unknown function unknown function -1 461 1888
YP_005098089.1 NC_016762_p62 O-antigen beta polymerase phrog_19842 polymerase DNA, RNA and nucleotide metabolism -1 43858 45012
YP_005098049.1 NC_016762_p22 hypothetical protein phrog_9037 unknown function unknown function -1 13801 14064
YP_005098080.1 NC_016762_p53 hypothetical protein phrog_782 unknown function unknown function 1 32362 32736
YP_005098072.1 NC_016762_p45 hypothetical protein phrog_760 unknown function unknown function 1 27868 29145
YP_005098034.1 NC_016762_p7 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 3302 3625
YP_005098062.1 NC_016762_p35 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 20267 21682
YP_005098044.1 NC_016762_p17 hypothetical protein phrog_6457 unknown function unknown function -1 12273 12464
YP_005098095.1 NC_016762_p68 integrase phrog_1 integrase integration and excision 1 47758 48876
YP_005098085.1 NC_016762_p58 hypothetical protein phrog_396 minor tail protein tail 1 37819 38310
YP_005098038.1 NC_016762_p11 recombinase phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 7571 9316
YP_005098041.1 NC_016762_p14 RecT protein phrog_561 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 10511 11329
YP_005098087.1 NC_016762_p60 hypothetical protein phrog_469 tail protein tail 1 38694 41423
YP_005098042.1 NC_016762_p15 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 11341 12144
YP_005098052.1 NC_016762_p25 hypothetical protein phrog_2707 unknown function unknown function 1 14800 15135
YP_005098071.1 NC_016762_p44 head morphogenesis protein phrog_758 head morphogenesis head and packaging 1 26881 27864
YP_005098083.1 NC_016762_p56 tail tape measure protein phrog_1107 tail length tape measure protein tail 1 34360 37371
YP_005098090.1 NC_016762_p63 hypothetical protein phrog_3377 HNH endonuclease DNA, RNA and nucleotide metabolism -1 45174 45782
YP_005098081.1 NC_016762_p54 hypothetical protein phrog_853 major tail protein tail 1 32751 33746
YP_005098065.1 NC_016762_p38 hypothetical protein phrog_198 holin lysis 1 22954 23343
YP_005098043.1 NC_016762_p16 hypothetical protein phrog_5864 unknown function unknown function -1 12152 12289
YP_005098063.1 NC_016762_p36 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 21675 22124
YP_005098066.1 NC_016762_p39 hypothetical protein phrog_217 holin lysis 1 23336 23620
YP_005098051.1 NC_016762_p24 hypothetical protein singleton unknown function unknown function -1 14387 14599
YP_005098067.1 NC_016762_p40 terminase small subunit phrog_51 terminase small subunit head and packaging 1 23629 24171
YP_005098036.1 NC_016762_p9 hypothetical protein phrog_3190 unknown function unknown function -1 4266 4832
YP_005098078.1 NC_016762_p51 hypothetical protein phrog_797 unknown function unknown function 1 31621 31959
YP_005098084.1 NC_016762_p57 hypothetical protein phrog_384 virion structural protein head and packaging 1 37368 37835
YP_005098039.1 NC_016762_p12 DNA segregation ATPase phrog_6576 unknown function unknown function -1 9320 10291
YP_005098030.1 NC_016762_p3 hypothetical protein singleton unknown function unknown function -1 1948 2091
YP_005098060.1 NC_016762_p33 hypothetical protein phrog_6111 unknown function unknown function 1 18984 19265
YP_005098057.1 NC_016762_p30 hypothetical protein phrog_29325 unknown function unknown function 1 17858 18241
YP_005098059.1 NC_016762_p32 hypothetical protein phrog_163 CII-like transcriptional activator transcription regulation 1 18409 18981
YP_005098076.1 NC_016762_p49 hypothetical protein phrog_17702 unknown function unknown function 1 30868 31236
YP_005098091.1 NC_016762_p64 phage lysozyme phrog_90 endolysin lysis 1 45936 46418
YP_005098037.1 NC_016762_p10 DNA methylase N-4/N-6 domain protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 4798 7428
YP_005098074.1 NC_016762_p47 coat protein phrog_771 virion structural protein head and packaging 1 29614 30708
YP_005098035.1 NC_016762_p8 hypothetical protein phrog_4826 unknown function unknown function -1 3622 4116
YP_005098068.1 NC_016762_p41 terminase large subunit phrog_2 terminase large subunit head and packaging 1 24155 25408
YP_005098079.1 NC_016762_p52 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 31961 32365
YP_005098082.1 NC_016762_p55 hypothetical protein phrog_791 unknown function unknown function 1 33743 34360
YP_005098033.1 NC_016762_p6 hypothetical protein phrog_2457 unknown function unknown function -1 2733 3305
YP_005098077.1 NC_016762_p50 hypothetical protein phrog_786 unknown function unknown function 1 31223 31624
YP_005098093.1 NC_016762_p66 hypothetical protein phrog_3580 unknown function unknown function 1 46780 47109
YP_005098092.1 NC_016762_p65 hypothetical protein phrog_3774 unknown function unknown function 1 46415 46783
YP_005098086.1 NC_016762_p59 hypothetical protein phrog_329 minor tail protein tail 1 38315 38722
YP_005098070.1 NC_016762_p43 hypothetical protein phrog_146 portal protein head and packaging 1 25608 26978
YP_005098088.1 NC_016762_p61 hypothetical protein phrog_13768 tail protein tail 1 41484 43724
YP_005098055.1 NC_016762_p28 phage repressor phrog_4 transcriptional repressor transcription regulation -1 16686 17558
YP_005098073.1 NC_016762_p46 hypothetical protein phrog_766 head decoration head and packaging 1 29149 29598
YP_005098050.1 NC_016762_p23 hypothetical protein phrog_24301 unknown function unknown function -1 14076 14204
YP_005098096.1 NC_016762_p69 AlpA family transcriptional regulator phrog_66 excisionase and transcriptional regulator integration and excision -1 48877 49110
YP_005098064.1 NC_016762_p37 hypothetical protein phrog_3373 unknown function unknown function 1 22153 22839
YP_005098061.1 NC_016762_p34 DNA replication protein O phrog_22470 replication protein DNA, RNA and nucleotide metabolism 1 19252 20274
YP_005098047.1 NC_016762_p20 hypothetical protein singleton unknown function unknown function -1 12900 13157
YP_005098053.1 NC_016762_p26 hypothetical protein singleton unknown function unknown function 1 15137 15490
YP_005098040.1 NC_016762_p13 hypothetical protein phrog_7521 unknown function unknown function -1 10304 10504
YP_005098045.1 NC_016762_p18 hypothetical protein phrog_6033 unknown function unknown function -1 12461 12682
YP_005098069.1 NC_016762_p42 hypothetical protein phrog_10752 unknown function unknown function 1 25408 25605
YP_005098094.1 NC_016762_p67 hypothetical protein phrog_3944 unknown function unknown function 1 47145 47408