Genomic map of Pseudomonas virus PMG1 (NC_016765)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_016765
Definition
Pseudomonas phage vB_PaeS_PMG1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Detrevirus.
DB of origin
REFSEQ
Length
54024
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
96
%GC
57.46
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_005098260.1 NC_016765_p57 hypothetical protein phrog_1008 DNA methyltransferase other -1 36867 37628
YP_005098286.1 NC_016765_p83 NinG protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 48480 49076
YP_005098217.1 NC_016765_p14 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 9185 9679
YP_005098228.1 NC_016765_p25 tail protein phrog_469 tail protein tail 1 15891 18620
YP_005098221.1 NC_016765_p18 hypothetical protein phrog_337 tail protein tail 1 11026 11286
YP_005098231.1 NC_016765_p28 O-polysaccharide acetyltransferase protein phrog_6705 O-antigen acetylase moron, auxiliary metabolic gene and host takeover 1 21326 23389
YP_005098223.1 NC_016765_p20 hypothetical protein phrog_384 virion structural protein head and packaging 1 13837 14316
YP_005098265.1 NC_016765_p62 hypothetical protein phrog_21577 unknown function unknown function -1 39006 39119
YP_005098206.1 NC_016765_p3 hypothetical protein phrog_4810 unknown function unknown function 1 2107 2271
YP_005098215.1 NC_016765_p12 hypothetical protein phrog_6804 unknown function unknown function 1 7794 8624
YP_005098295.1 NC_016765_p92 hypothetical protein phrog_19728 unknown function unknown function 1 52571 52699
YP_005098285.1 NC_016765_p82 hypothetical protein phrog_13573 unknown function unknown function 1 48118 48483
YP_005098264.1 NC_016765_p61 hypothetical protein phrog_292 unknown function unknown function -1 38839 39009
YP_005098263.1 NC_016765_p60 hypothetical protein phrog_874 unknown function unknown function -1 38186 38842
YP_005098214.1 NC_016765_p11 hypothetical protein phrog_34607 unknown function unknown function 1 7185 7733
YP_005098249.1 NC_016765_p46 hypothetical protein phrog_3592 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover -1 31312 31803
YP_005098212.1 NC_016765_p9 head-tail connector protein phrog_40 head-tail adaptor Ad1 connector 1 6390 6710
YP_005098219.1 NC_016765_p16 major tail protein phrog_158 major tail protein tail 1 10118 10639
YP_005098294.1 NC_016765_p91 hypothetical protein phrog_1046 unknown function unknown function 1 52338 52571
YP_005098279.1 NC_016765_p76 hypothetical protein phrog_8532 unknown function unknown function 1 45829 45948
YP_005098218.1 NC_016765_p15 hypothetical protein phrog_78 tail terminator connector 1 9682 10047
YP_005098297.1 NC_016765_p94 hypothetical protein phrog_9003 unknown function unknown function 1 53048 53299
YP_005098280.1 NC_016765_p77 hypothetical protein phrog_4405 unknown function unknown function 1 45945 46454
YP_005098238.1 NC_016765_p35 integrase phrog_1 integrase integration and excision -1 27148 28257
YP_005098213.1 NC_016765_p10 head-tail adaptor phrog_25 head closure Hc1 connector 1 6711 7067
YP_005098207.1 NC_016765_p4 hypothetical protein phrog_12 portal protein head and packaging 1 2264 3568
YP_005098208.1 NC_016765_p5 Clp protease phrog_1684 head maturation protease head and packaging 1 3572 4462
YP_005098252.1 NC_016765_p49 hypothetical protein phrog_6604 unknown function unknown function -1 33843 34055
YP_005098298.1 NC_016765_p95 hypothetical protein phrog_6225 unknown function unknown function 1 53296 53541
YP_005098247.1 NC_016765_p44 hypothetical protein phrog_2730 unknown function unknown function -1 30754 30957
YP_005098222.1 NC_016765_p19 tail tape measure protein phrog_2854 tail length tape measure protein tail 1 11336 13840
YP_005098224.1 NC_016765_p21 hypothetical protein phrog_396 minor tail protein tail 1 14300 14791
YP_005098257.1 NC_016765_p54 hypothetical protein phrog_7838 exonuclease DNA, RNA and nucleotide metabolism -1 35556 36302
YP_005098240.1 NC_016765_p37 hypothetical protein phrog_368 unknown function unknown function -1 28603 28941
YP_005098261.1 NC_016765_p58 hypothetical protein singleton unknown function unknown function -1 37696 37842
YP_005098255.1 NC_016765_p52 transcriptional regulator phrog_13895 transcriptional regulator transcription regulation -1 34719 35054
YP_005098287.1 NC_016765_p84 hypothetical protein phrog_7514 unknown function unknown function 1 49076 49393
YP_005098243.1 NC_016765_p40 hypothetical protein phrog_11137 unknown function unknown function -1 29452 29616
YP_005098293.1 NC_016765_p90 hypothetical protein phrog_217 holin lysis 1 52054 52338
YP_005098250.1 NC_016765_p47 hypothetical protein phrog_3956 unknown function unknown function -1 31796 33673
YP_005098290.1 NC_016765_p87 hypothetical protein phrog_26944 unknown function unknown function 1 50690 50926
YP_005098296.1 NC_016765_p93 hypothetical protein phrog_9736 unknown function unknown function 1 52689 53048
YP_005098220.1 NC_016765_p17 hypothetical protein phrog_1749 tail assembly chaperone tail 1 10649 11008
YP_005098283.1 NC_016765_p80 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 47274 47861
YP_005098275.1 NC_016765_p72 cII regulatory protein phrog_725 CII-like regulator transcription regulation 1 42935 43243
YP_005098234.1 NC_016765_p31 lysozyme phrog_90 endolysin lysis 1 25549 26031
YP_005098216.1 NC_016765_p13 hypothetical protein phrog_6564 methyltransferase other 1 8575 9192
YP_005098284.1 NC_016765_p81 hypothetical protein phrog_2529 unknown function unknown function 1 47858 48121
YP_005098233.1 NC_016765_p30 hypothetical protein phrog_3377 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24787 25395
YP_005098241.1 NC_016765_p38 hypothetical protein singleton unknown function unknown function -1 28938 29156
YP_005098288.1 NC_016765_p85 hypothetical protein phrog_3412 unknown function unknown function 1 49461 50039
YP_005098236.1 NC_016765_p33 hypothetical protein phrog_3580 unknown function unknown function 1 26393 26653
YP_005098204.1 NC_016765_p1 terminase small subunit phrog_83 terminase small subunit head and packaging 1 37 417
YP_005098245.1 NC_016765_p42 hypothetical protein phrog_5315 unknown function unknown function -1 30089 30235
YP_005098225.1 NC_016765_p22 hypothetical protein phrog_32611 unknown function unknown function 1 14881 15252
YP_005098256.1 NC_016765_p53 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism -1 35062 35559
YP_005098269.1 NC_016765_p66 hypothetical protein phrog_25727 unknown function unknown function -1 40211 40504
YP_005098289.1 NC_016765_p86 hypothetical protein phrog_2255 HNH endonuclease DNA, RNA and nucleotide metabolism 1 50165 50599
YP_005098259.1 NC_016765_p56 hypothetical protein phrog_20457 unknown function unknown function -1 36683 36847
YP_005098230.1 NC_016765_p27 inhibitor of alpha-polymerase phrog_34981 unknown function unknown function -1 21048 21143
YP_005098274.1 NC_016765_p71 Cro repressor protein phrog_35 transcriptional repressor transcription regulation 1 42712 42933
YP_005098282.1 NC_016765_p79 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46649 47281
YP_005098232.1 NC_016765_p29 O-antigen beta polymerase phrog_19842 polymerase DNA, RNA and nucleotide metabolism -1 23465 24625
YP_005098251.1 NC_016765_p48 hypothetical protein phrog_9134 unknown function unknown function -1 33670 33879
YP_005098253.1 NC_016765_p50 hypothetical protein singleton unknown function unknown function -1 34074 34490
YP_005098211.1 NC_016765_p8 hypothetical protein phrog_4603 alpha-2;3-sialyltransferase other 1 5813 6409
YP_005098210.1 NC_016765_p7 hypothetical protein phrog_7993 unknown function unknown function 1 5691 5978
YP_005098299.1 NC_016765_p96 HNH endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 53534 53848
YP_005098242.1 NC_016765_p39 hypothetical protein phrog_343 unknown function unknown function -1 29153 29449
YP_005098267.1 NC_016765_p64 hypothetical protein phrog_13871 unknown function unknown function -1 39283 39546
YP_005098227.1 NC_016765_p24 hypothetical protein phrog_329 minor tail protein tail 1 15512 15919
YP_005098271.1 NC_016765_p68 hypothetical protein phrog_4245 unknown function unknown function -1 40737 41225
YP_005098276.1 NC_016765_p73 hypothetical protein phrog_6111 unknown function unknown function 1 43243 43506
YP_005098235.1 NC_016765_p32 hypothetical protein phrog_3774 unknown function unknown function 1 26028 26396
YP_005098272.1 NC_016765_p69 hypothetical protein phrog_28098 unknown function unknown function -1 41675 41944
YP_005098254.1 NC_016765_p51 hypothetical protein phrog_14444 unknown function unknown function -1 34550 34708
YP_005098239.1 NC_016765_p36 excisionase phrog_12527 excisionase integration and excision -1 28143 28457
YP_005098292.1 NC_016765_p89 hypothetical protein phrog_198 holin lysis 1 51693 52061
YP_005098244.1 NC_016765_p41 hypothetical protein phrog_5614 unknown function unknown function -1 29619 30104
YP_005098237.1 NC_016765_p34 hypothetical protein phrog_3944 unknown function unknown function 1 26689 26952
YP_005098248.1 NC_016765_p45 Lar family protein phrog_3592 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover -1 30954 31319
YP_005098229.1 NC_016765_p26 hypothetical protein phrog_13768 tail protein tail 1 18680 20923
YP_005098291.1 NC_016765_p88 hypothetical protein phrog_17123 unknown function unknown function 1 51049 51252
YP_005098266.1 NC_016765_p63 hypothetical protein singleton unknown function unknown function -1 39116 39286
YP_005098270.1 NC_016765_p67 hypothetical protein phrog_924 unknown function unknown function -1 40455 40640
YP_005098205.1 NC_016765_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 419 2110
YP_005098273.1 NC_016765_p70 cI repressor protein phrog_4 transcriptional repressor transcription regulation -1 41954 42625
YP_005098278.1 NC_016765_p75 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 44489 45829
YP_005098246.1 NC_016765_p43 hypothetical protein phrog_7427 unknown function unknown function -1 30385 30681
YP_005098277.1 NC_016765_p74 DNA replication initiation protein O phrog_5810 replication initiation protein DNA, RNA and nucleotide metabolism 1 43503 44492
YP_005098268.1 NC_016765_p65 hypothetical protein phrog_4801 unknown function unknown function -1 39543 39968
YP_005098258.1 NC_016765_p55 hypothetical protein phrog_8363 unknown function unknown function -1 36345 36533
YP_005098209.1 NC_016765_p6 major capsid protein phrog_10 major head protein head and packaging 1 4459 5646
YP_005098281.1 NC_016765_p78 DksA-like zinc finger domain containing protein phrog_54 DksA-like zinc-finger protein other 1 46456 46659
YP_005098226.1 NC_016765_p23 hypothetical protein phrog_35241 unknown function unknown function 1 15263 15457
YP_005098262.1 NC_016765_p59 hypothetical protein phrog_4894 unknown function unknown function -1 37839 38150