Genomic map of Lactococcus virus ASCC191 (NC_017688)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_017688
Definition
Lactococcus Phage ASCC191, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus.
DB of origin
REFSEQ
Length
32414
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
34.11
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006201136.1 NC_017688_p54 hypothetical protein phrog_12718 unknown function unknown function -1 28858 29037
YP_006201086.1 NC_017688_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2627 2911
YP_006201113.1 NC_017688_p31 hypothetical protein phrog_3365 unknown function unknown function -1 20745 20933
YP_006201126.1 NC_017688_p44 early protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 25405 25764
YP_006201134.1 NC_017688_p52 DNA polymerase subunit singleton unknown function unknown function -1 28236 28574
YP_006201092.1 NC_017688_p10 structural protein phrog_1484 virion structural protein head and packaging 1 6339 6677
YP_006201115.1 NC_017688_p33 early protein phrog_1225 unknown function unknown function -1 21282 21590
YP_006201114.1 NC_017688_p32 hypothetical protein phrog_6037 unknown function unknown function -1 21008 21223
YP_006201083.1 NC_017688_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
YP_006201105.1 NC_017688_p23 lysin phrog_670 endolysin lysis 1 17648 18352
YP_006201140.1 NC_017688_p58 hypothetical protein phrog_1436 unknown function unknown function 1 30699 30830
YP_006201111.1 NC_017688_p29 hypothetical protein phrog_2530 unknown function unknown function -1 20192 20383
YP_006201084.1 NC_017688_p2 hypothetical protein phrog_4501 unknown function unknown function 1 773 1003
YP_006201108.1 NC_017688_p26 hypothetical protein phrog_1415 unknown function unknown function -1 19500 19847
YP_006201121.1 NC_017688_p39 hypothetical protein phrog_1919 unknown function unknown function -1 23649 23963
YP_006201101.1 NC_017688_p19 hypothetical protein phrog_1432 tail associated lysin tail 1 15118 16245
YP_006201102.1 NC_017688_p20 hypothetical protein phrog_1434 unknown function unknown function 1 16235 16528
YP_006201110.1 NC_017688_p28 hypothetical protein phrog_1820 unknown function unknown function -1 20014 20190
YP_006201117.1 NC_017688_p35 hypothetical protein phrog_20711 unknown function unknown function -1 21720 21908
YP_006201131.1 NC_017688_p49 hypothetical protein phrog_2228 unknown function unknown function -1 26993 27328
YP_006201122.1 NC_017688_p40 hypothetical protein phrog_9706 unknown function unknown function -1 24081 24266
YP_006201130.1 NC_017688_p48 hypothetical protein phrog_1632 unknown function unknown function -1 26706 26996
YP_006201120.1 NC_017688_p38 hypothetical protein phrog_1825 DNA methyltransferase other -1 23360 23611
YP_006201125.1 NC_017688_p43 hypothetical protein phrog_1295 unknown function unknown function -1 25177 25392
YP_006201100.1 NC_017688_p18 hypothetical protein phrog_1424 tail protein tail 1 14222 15118
YP_006201107.1 NC_017688_p25 hypothetical protein phrog_1430 unknown function unknown function -1 19058 19327
YP_006201103.1 NC_017688_p21 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16518 17276
YP_006201106.1 NC_017688_p24 hypothetical protein phrog_3874 transglycosylase other -1 18449 18997
YP_006201087.1 NC_017688_p5 portal protein phrog_12 portal protein head and packaging 1 2924 4060
YP_006201127.1 NC_017688_p45 sak protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25769 26335
YP_006201118.1 NC_017688_p36 hypothetical protein phrog_3972 unknown function unknown function -1 22041 22391
YP_006201137.1 NC_017688_p55 hypothetical protein phrog_4505 unknown function unknown function -1 29038 29238
YP_006201090.1 NC_017688_p8 structural protein phrog_1428 head-tail connector protein connector 1 5772 6035
YP_006201139.1 NC_017688_p57 hypothetical protein phrog_1952 unknown function unknown function 1 30566 30694
YP_006201093.1 NC_017688_p11 structural protein phrog_1440 virion structural protein head and packaging 1 6668 7033
YP_006201109.1 NC_017688_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19847 20014
YP_006201133.1 NC_017688_p51 DNA polymerase subunit phrog_1284 unknown function unknown function -1 27677 28243
YP_006201138.1 NC_017688_p56 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 29933 30289
YP_006201098.1 NC_017688_p16 structural protein phrog_1421 virion structural protein head and packaging 1 10720 11232
YP_006201096.1 NC_017688_p14 major capsid protein phrog_1433 major tail protein tail 1 9465 10370
YP_006201128.1 NC_017688_p46 HNH endonuclease singleton unknown function unknown function -1 26332 26499
YP_006201094.1 NC_017688_p12 neck passage structure protein phrog_7918 neck passage structure protein connector 1 7090 9270
YP_006201129.1 NC_017688_p47 hypothetical protein phrog_1449 unknown function unknown function -1 26486 26752
YP_006201124.1 NC_017688_p42 hypothetical protein phrog_13331 unknown function unknown function -1 24860 25180
YP_006201135.1 NC_017688_p53 hypothetical protein phrog_2541 unknown function unknown function -1 28567 28788
YP_006201123.1 NC_017688_p41 hypothetical protein phrog_1317 unknown function unknown function -1 24307 24840
YP_006201085.1 NC_017688_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1015 2637
YP_006201089.1 NC_017688_p7 structural protein phrog_1393 minor head protein head and packaging 1 4570 5751
YP_006201116.1 NC_017688_p34 hypothetical protein phrog_1508 unknown function unknown function -1 21590 21709
YP_006201132.1 NC_017688_p50 hypothetical protein phrog_1405 unknown function unknown function -1 27421 27684
YP_006201112.1 NC_017688_p30 early protein phrog_1509 unknown function unknown function -1 20425 20682
YP_006201104.1 NC_017688_p22 bifunctional anti-holin / holin phrog_1379 unknown function unknown function 1 17298 17651
YP_006201141.1 NC_017688_p59 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30827 31306
YP_006201095.1 NC_017688_p13 structural protein phrog_15944 virion structural protein head and packaging 1 9307 9444
YP_006201097.1 NC_017688_p15 structural protein phrog_1420 virion structural protein head and packaging 1 10425 10700
YP_006201119.1 NC_017688_p37 hypothetical protein phrog_56 DNA methyltransferase other -1 22453 23367
YP_006201088.1 NC_017688_p6 protease phrog_80 head maturation protease head and packaging 1 4041 4577
YP_006201091.1 NC_017688_p9 structural protein phrog_1429 virion structural protein head and packaging 1 6035 6349
YP_006201099.1 NC_017688_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 11232 14222