| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_017732 |
Definition |
Enterococcus phage EF62phi, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
30505 |
Host Name |
Enterococcus faecalis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
32.65 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006218707.1 | NC_017732_p12 | hypothetical protein | phrog_3409 | unknown function | unknown function | 1 | 6257 | 6592 |
| YP_006218739.1 | NC_017732_p44 | tail protein | phrog_2248 | tail protein | tail | 1 | 25823 | 27625 |
| YP_006218702.1 | NC_017732_p7 | phage family protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4995 | 5189 |
| YP_006218700.1 | NC_017732_p5 | hypothetical protein | phrog_10008 | unknown function | unknown function | 1 | 3088 | 4050 |
| YP_006218719.1 | NC_017732_p24 | hypothetical protein | phrog_918 | unknown function | unknown function | 1 | 10725 | 10985 |
| YP_006218727.1 | NC_017732_p32 | endolysin type Endo-N-acetylmuramidase | phrog_291 | endolysin | lysis | 1 | 16573 | 17502 |
| YP_006218712.1 | NC_017732_p17 | D replication protein DC | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 8566 | 9447 |
| YP_006218738.1 | NC_017732_p43 | hypothetical protein | phrog_7782 | unknown function | unknown function | 1 | 25075 | 25809 |
| YP_006218733.1 | NC_017732_p38 | hypothetical protein | phrog_6808 | unknown function | unknown function | 1 | 19400 | 19723 |
| YP_006218741.1 | NC_017732_p46 | ycfA-like family protein, toxin component | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 29170 | 29358 |
| YP_006218731.1 | NC_017732_p36 | hypothetical protein | phrog_7222 | unknown function | unknown function | 1 | 18777 | 19076 |
| YP_006218711.1 | NC_017732_p16 | dD and phage-associated domain protein | phrog_2562 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 7689 | 8588 |
| YP_006218706.1 | NC_017732_p11 | hypothetical protein | phrog_14403 | unknown function | unknown function | 1 | 5943 | 6245 |
| YP_006218722.1 | NC_017732_p27 | Gp16 type D encapsidation protein | phrog_2150 | terminase | head and packaging | 1 | 12712 | 13884 |
| YP_006218705.1 | NC_017732_p10 | hypothetical protein | phrog_1773 | 6-phosphofructokinase | other | 1 | 5779 | 5946 |
| YP_006218721.1 | NC_017732_p26 | hypothetical protein | phrog_7556 | unknown function | unknown function | 1 | 11651 | 12652 |
| YP_006218735.1 | NC_017732_p40 | major head protein | phrog_2006 | major head protein | head and packaging | 1 | 20103 | 21512 |
| YP_006218701.1 | NC_017732_p6 | LexA-like bifunctiol S24 family peptidase/transcriptiol regulator protein | phrog_4 | transcriptional repressor | transcription regulation | -1 | 4099 | 4833 |
| YP_006218697.1 | NC_017732_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 678 | 1043 |
| YP_006218699.1 | NC_017732_p4 | hypothetical protein | phrog_7882 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 2160 | 3062 |
| YP_006218715.1 | NC_017732_p20 | hypothetical protein | phrog_3302 | unknown function | unknown function | 1 | 9809 | 10078 |
| YP_006218710.1 | NC_017732_p15 | hypothetical protein | phrog_36288 | unknown function | unknown function | 1 | 7342 | 7644 |
| YP_006218718.1 | NC_017732_p23 | hypothetical protein | phrog_4960 | unknown function | unknown function | 1 | 10547 | 10732 |
| YP_006218717.1 | NC_017732_p22 | hypothetical protein | phrog_8326 | unknown function | unknown function | 1 | 10270 | 10527 |
| YP_006218723.1 | NC_017732_p28 | hypothetical protein | phrog_7808 | unknown function | unknown function | 1 | 14076 | 14651 |
| YP_006218729.1 | NC_017732_p34 | hypothetical protein | phrog_6849 | unknown function | unknown function | 1 | 18316 | 18486 |
| YP_006218734.1 | NC_017732_p39 | hypothetical protein | phrog_6939 | unknown function | unknown function | 1 | 19716 | 20096 |
| YP_006218728.1 | NC_017732_p33 | lower collar protein | phrog_5472 | lower collar | tail | 1 | 17536 | 18303 |
| YP_006218716.1 | NC_017732_p21 | hypothetical protein | phrog_8317 | unknown function | unknown function | 1 | 10082 | 10306 |
| YP_006218737.1 | NC_017732_p42 | bdr repeat protein | phrog_7547 | unknown function | unknown function | 1 | 22598 | 25072 |
| YP_006218703.1 | NC_017732_p8 | hypothetical protein | phrog_1970 | unknown function | unknown function | 1 | 5206 | 5355 |
| YP_006218709.1 | NC_017732_p14 | hypothetical protein | phrog_12394 | unknown function | unknown function | 1 | 6884 | 7342 |
| YP_006218740.1 | NC_017732_p45 | CHAP domain protein | phrog_7888 | unknown function | unknown function | 1 | 27630 | 29009 |
| YP_006218732.1 | NC_017732_p37 | hypothetical protein | phrog_6914 | unknown function | unknown function | 1 | 19098 | 19397 |
| YP_006218743.1 | NC_017732_p48 | hypothetical protein | phrog_31352 | unknown function | unknown function | -1 | 30230 | 30463 |
| YP_006218736.1 | NC_017732_p41 | bacteriophage head-tail connector protein | phrog_2038 | upper collar connector | connector | 1 | 21584 | 22585 |
| YP_006218696.1 | NC_017732_p1 | hypothetical protein | phrog_31352 | unknown function | unknown function | 1 | 43 | 288 |
| YP_006218726.1 | NC_017732_p31 | holin | phrog_199 | holin | lysis | 1 | 16167 | 16592 |
| YP_006218742.1 | NC_017732_p47 | toxin-antitoxin system, antitoxin component, HicB family | phrog_497 | toxin-antitoxin system HicB-like | moron, auxiliary metabolic gene and host takeover | 1 | 29390 | 29851 |
| YP_006218720.1 | NC_017732_p25 | hypothetical protein | phrog_7700 | unknown function | unknown function | 1 | 11071 | 11634 |
| YP_006218714.1 | NC_017732_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9681 | 9812 |
| YP_006218730.1 | NC_017732_p35 | hypothetical protein | phrog_7466 | unknown function | unknown function | 1 | 18491 | 18736 |
| YP_006218713.1 | NC_017732_p18 | hypothetical protein | phrog_7664 | unknown function | unknown function | 1 | 9440 | 9631 |
| YP_006218704.1 | NC_017732_p9 | Phage related protein | phrog_834 | unknown function | unknown function | 1 | 5423 | 5782 |
| YP_006218698.1 | NC_017732_p3 | chromosome partitioning ATPase | phrog_164 | ParA-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 1048 | 1851 |
| YP_006218708.1 | NC_017732_p13 | hypothetical protein | phrog_3930 | unknown function | unknown function | 1 | 6593 | 6871 |
| YP_006218724.1 | NC_017732_p29 | bacteriophage tail fiber protein | phrog_8524 | unknown function | unknown function | 1 | 14917 | 15738 |
| YP_006218725.1 | NC_017732_p30 | phage XkdX domain protein | phrog_7304 | unknown function | unknown function | 1 | 15768 | 16154 |