Genomic map of Pseudomonas phage vB_Pae-Kakheti25 (NC_017864)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_017864
Definition
Pseudomonas phage vB_Pae-Kakheti25, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Septimatrevirus.
DB of origin
REFSEQ
Length
42844
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
53.8
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006299918.1 NC_017864_p54 hypothetical protein phrog_16782 unknown function unknown function 1 40795 40962
YP_006299873.1 NC_017864_p9 F-like head morphogenesis protein phrog_241 head morphogenesis head and packaging 1 5235 6329
YP_006299890.1 NC_017864_p26 central tail hub phrog_1101 tail protein tail 1 21234 23675
YP_006299910.1 NC_017864_p46 hypothetical protein phrog_11401 unknown function unknown function 1 38257 38631
YP_006299891.1 NC_017864_p27 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 23676 25727
YP_006299902.1 NC_017864_p38 replicative primase/helicase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 33320 35641
YP_006299920.1 NC_017864_p56 hypothetical protein phrog_9241 unknown function unknown function 1 41426 41809
YP_006299889.1 NC_017864_p25 virion protein phrog_778 tail assembly protein tail 1 20406 21230
YP_006299888.1 NC_017864_p24 virion protein phrog_1082 tail assembly protein tail 1 18691 20406
YP_006299880.1 NC_017864_p16 virion protein phrog_179 tail terminator connector 1 9888 10343
YP_006299908.1 NC_017864_p44 hypothetical protein phrog_10560 unknown function unknown function 1 37612 37854
YP_006299905.1 NC_017864_p41 hypothetical protein phrog_9154 unknown function unknown function 1 36639 36842
YP_006299894.1 NC_017864_p30 DEAD box helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 27097 28752
YP_006299907.1 NC_017864_p43 hypothetical protein phrog_20489 unknown function unknown function 1 37458 37625
YP_006299886.1 NC_017864_p22 virion protein phrog_687 structural protein head and packaging 1 16772 17734
YP_006299914.1 NC_017864_p50 hypothetical protein phrog_13844 unknown function unknown function 1 39646 39825
YP_006299904.1 NC_017864_p40 hypothetical protein singleton unknown function unknown function -1 36190 36618
YP_006299884.1 NC_017864_p20 tail completion protein phrog_169 tail completion or Neck1 protein connector 1 12717 13151
YP_006299896.1 NC_017864_p32 hypothetical protein phrog_34762 unknown function unknown function -1 30011 30172
YP_006299921.1 NC_017864_p57 hypothetical protein phrog_6168 unknown function unknown function 1 41844 42053
YP_006299898.1 NC_017864_p34 RecA phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31159 31875
YP_006299917.1 NC_017864_p53 hypothetical protein phrog_9844 unknown function unknown function 1 40491 40724
YP_006299906.1 NC_017864_p42 hypothetical protein phrog_10287 unknown function unknown function 1 37186 37461
YP_006299897.1 NC_017864_p33 member of DUF669 phage protein family phrog_6015 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 30354 31100
YP_006299883.1 NC_017864_p19 tail chaperonin phrog_313 Tail assembly chaperone tail 1 11955 12383
YP_006299874.1 NC_017864_p10 scaffold protein phrog_206 head scaffolding protein head and packaging 1 6366 7085
YP_006299913.1 NC_017864_p49 hypothetical protein phrog_8564 unknown function unknown function 1 39446 39649
YP_006299893.1 NC_017864_p29 hypothetical protein phrog_11184 unknown function unknown function -1 26865 27092
YP_006299912.1 NC_017864_p48 hypothetical protein phrog_824 unknown function unknown function 1 38910 39446
YP_006299871.1 NC_017864_p7 large terminase subunit phrog_2 terminase large subunit head and packaging 1 2109 3704
YP_006299877.1 NC_017864_p13 virion protein phrog_10405 virion structural protein head and packaging 1 8605 8976
YP_006299911.1 NC_017864_p47 hypothetical protein phrog_54 DksA-like zinc-finger protein other 1 38692 38913
YP_006299878.1 NC_017864_p14 virion protein phrog_477 head-tail adaptor Ad1 connector 1 8989 9507
YP_006299916.1 NC_017864_p52 hypothetical protein phrog_14614 endolysin lysis 1 40208 40498
YP_006299872.1 NC_017864_p8 portal protein phrog_145 portal protein head and packaging 1 3718 5223
YP_006299869.1 NC_017864_p5 Rz1 phrog_1275 Rz-like spanin lysis 1 1301 1582
YP_006299915.1 NC_017864_p51 hypothetical protein phrog_14000 unknown function unknown function 1 39886 40191
YP_006299882.1 NC_017864_p18 tail chaperonin phrog_8233 tail assembly chaperone tail 1 11955 12748
YP_006299901.1 NC_017864_p37 hypothetical protein phrog_13059 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 33142 33330
YP_006299876.1 NC_017864_p12 hypothetical protein phrog_9062 unknown function unknown function 1 8135 8539
YP_006299919.1 NC_017864_p55 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 40953 41420
YP_006299900.1 NC_017864_p36 MazG phrog_229 MazG-like pyrophosphatase other -1 32447 33004
YP_006299867.1 NC_017864_p3 endolysin phrog_1259 baseplate hub subunit and tail lysozyme tail 1 524 1069
YP_006299875.1 NC_017864_p11 major capsid protein phrog_247 major head protein head and packaging 1 7088 8065
YP_006299881.1 NC_017864_p17 major tail tube protein phrog_290 minor tail protein tail 1 10356 11891
YP_006299866.1 NC_017864_p2 holin phrog_1356 holin lysis 1 265 531
YP_006299899.1 NC_017864_p35 hypothetical protein phrog_2480 unknown function unknown function -1 31930 32370
YP_006299903.1 NC_017864_p39 hypothetical protein phrog_3633 unknown function unknown function 1 35794 36090
YP_006299885.1 NC_017864_p21 tape measure protein phrog_3336 tail length tape measure protein tail 1 13157 16771
YP_006299865.1 NC_017864_p1 member of phage protein family found in lysis cassettes phrog_462 lipoprotein other 1 14 268
YP_006299892.1 NC_017864_p28 replicative clamp phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 25739 26881
YP_006299870.1 NC_017864_p6 possible small terminase subunit phrog_5334 terminase small subunit head and packaging 1 1640 2128
YP_006299868.1 NC_017864_p4 Rz phrog_1026 Rz-like spanin lysis 1 1081 1386
YP_006299895.1 NC_017864_p31 RecB exonuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 28745 29842
YP_006299909.1 NC_017864_p45 hypothetical protein phrog_22782 unknown function unknown function 1 37939 38208
YP_006299879.1 NC_017864_p15 virion protein phrog_161 head closure Hc1 connector 1 9511 9891
YP_006299922.1 NC_017864_p58 hypothetical protein phrog_7597 unknown function unknown function 1 42137 42709
YP_006299887.1 NC_017864_p23 virion protein phrog_687 structural protein head and packaging 1 17734 18687