Genomic map of Pseudomonas phage vB_Pae-TbilisiM32 (NC_017865)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_017865
Definition
Pseudomonas phage vB_Pae-TbilisiM32, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; unclassified Phikmvvirus.
DB of origin
REFSEQ
Length
42966
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
62.27
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006299938.1 NC_017865_p16 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8469 9737
YP_006299933.1 NC_017865_p11 hypothetical protein phrog_6915 unknown function unknown function 1 5507 5866
YP_006299924.1 NC_017865_p2 hypothetical protein phrog_7124 unknown function unknown function 1 2021 2248
YP_006299928.1 NC_017865_p6 hypothetical protein phrog_8496 unknown function unknown function 1 3927 4106
YP_006299939.1 NC_017865_p17 ppGpp synthetase phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9727 10344
YP_006299937.1 NC_017865_p15 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7676 8500
YP_006299963.1 NC_017865_p41 tail fiber component phrog_8874 tail fiber protein tail 1 36702 37160
YP_006299936.1 NC_017865_p14 acetyltransferase phrog_2563 unknown function unknown function 1 6948 7490
YP_006299944.1 NC_017865_p22 hypothetical protein phrog_862 unknown function unknown function 1 14408 15457
YP_006299966.1 NC_017865_p44 maturase A phrog_891 terminase small subunit head and packaging 1 38670 38975
YP_006299947.1 NC_017865_p25 3' to 5' exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16825 17871
YP_006299942.1 NC_017865_p20 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11620 14043
YP_006299961.1 NC_017865_p39 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 31932 35945
YP_006299932.1 NC_017865_p10 hypothetical protein phrog_5433 unknown function unknown function 1 5022 5438
YP_006299955.1 NC_017865_p33 scaffold protein phrog_1018 head scaffolding protein head and packaging 1 23525 24493
YP_006299972.1 NC_017865_p50 virion protein phrog_6908 minor head protein head and packaging 1 41842 42156
YP_006299970.1 NC_017865_p48 Rz phrog_214 Rz-like spanin lysis 1 41423 41752
YP_006299948.1 NC_017865_p26 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 17881 18249
YP_006299945.1 NC_017865_p23 5' to 3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15457 16398
YP_006299949.1 NC_017865_p27 hypothetical protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 18246 18392
YP_006299971.1 NC_017865_p49 Rz1 phrog_456 Rz-like spanin lysis 1 41640 41840
YP_006299929.1 NC_017865_p7 hypothetical protein phrog_4342 unknown function unknown function 1 4106 4399
YP_006299968.1 NC_017865_p46 holin phrog_6597 holin lysis 1 40786 40986
YP_006299946.1 NC_017865_p24 endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16388 16828
YP_006299969.1 NC_017865_p47 endolysin phrog_7 endolysin lysis 1 40983 41465
YP_006299927.1 NC_017865_p5 hypothetical protein phrog_7027 unknown function unknown function 1 3521 3748
YP_006299960.1 NC_017865_p38 internal virion protein with lysozyme domain phrog_2083 internal virion lysozyme motif head and packaging 1 29232 31928
YP_006299956.1 NC_017865_p34 major capsid protein phrog_267 major head protein head and packaging 1 24546 25553
YP_006299940.1 NC_017865_p18 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10344 11291
YP_006299967.1 NC_017865_p45 maturase B phrog_38 terminase large subunit head and packaging 1 38984 40789
YP_006299957.1 NC_017865_p35 tail hub A phrog_446 tail protein tail 1 25650 26204
YP_006299931.1 NC_017865_p9 hypothetical protein phrog_4342 unknown function unknown function 1 4650 4943
YP_006299953.1 NC_017865_p31 virion protein phrog_3112 virion structural protein head and packaging 1 21681 21977
YP_006299952.1 NC_017865_p30 acetyltransferase phrog_3986 unknown function unknown function 1 21263 21850
YP_006299959.1 NC_017865_p37 internal virion protein phrog_805 internal virion protein head and packaging 1 28687 29232
YP_006299950.1 NC_017865_p28 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18401 20851
YP_006299941.1 NC_017865_p19 hypothetical protein phrog_7292 unknown function unknown function 1 11294 11623
YP_006299943.1 NC_017865_p21 hypothetical protein phrog_5437 unknown function unknown function 1 14040 14351
YP_006299926.1 NC_017865_p4 hypothetical protein phrog_6951 unknown function unknown function 1 3166 3534
YP_006299935.1 NC_017865_p13 hypothetical protein phrog_9409 unknown function unknown function 1 6758 7177
YP_006299923.1 NC_017865_p1 hypothetical protein phrog_5722 unknown function unknown function 1 1737 2021
YP_006299958.1 NC_017865_p36 tail hub B phrog_457 tail protein tail 1 26207 28687
YP_006299973.1 NC_017865_p51 virion protein phrog_7171 minor head protein head and packaging 1 42206 42400
YP_006299930.1 NC_017865_p8 hypothetical protein phrog_4955 unknown function unknown function 1 4396 4632
YP_006299964.1 NC_017865_p42 tail fiber lysozyme component phrog_4176 tail fiber protein tail 1 37153 38061
YP_006299934.1 NC_017865_p12 hypothetical protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5869 6678
YP_006299951.1 NC_017865_p29 hypothetical protein phrog_6575 unknown function unknown function 1 21012 21263
YP_006299925.1 NC_017865_p3 hypothetical protein phrog_1448 unknown function unknown function 1 2259 2798
YP_006299954.1 NC_017865_p32 portal protein phrog_449 head-tail adaptor connector 1 21989 23521
YP_006299965.1 NC_017865_p43 tail fiber component phrog_4950 tail fiber protein tail 1 38065 38670
YP_006299962.1 NC_017865_p40 tail fiber capsid attachment component phrog_6953 tail fiber protein tail 1 35947 36702