Genomic map of Clostridium phage phiCP7R (NC_017980)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_017980
Definition
Clostridium phage phiCP7R, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
18397
Host Name
Clostridium perfringens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
26
%GC
34.81
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006383607.1 NC_017980_p26 hypothetical protein singleton unknown function unknown function -1 17565 17807
YP_006383595.1 NC_017980_p14 hypothetical protein phrog_13286 tail protein tail -1 9566 9835
YP_006383605.1 NC_017980_p24 hypothetical protein phrog_24415 unknown function unknown function -1 17009 17209
YP_006383582.1 NC_017980_p1 hypothetical protein phrog_33044 unknown function unknown function 1 154 531
YP_006383592.1 NC_017980_p11 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis -1 8173 8856
YP_006383591.1 NC_017980_p10 pre-neck appendage protein phrog_17212 pre-neck appendage protein connector -1 6232 8106
YP_006383590.1 NC_017980_p9 DNA encapsidation protein phrog_2150 terminase head and packaging 1 5043 6200
YP_006383602.1 NC_017980_p21 major head protein phrog_2006 major head protein head and packaging -1 14995 16107
YP_006383598.1 NC_017980_p17 connector protein phrog_2038 upper collar connector connector -1 10925 11830
YP_006383597.1 NC_017980_p16 collar protein phrog_5472 lower collar tail -1 10258 10947
YP_006383599.1 NC_017980_p18 hypothetical protein phrog_4898 holin lysis -1 11823 12077
YP_006383586.1 NC_017980_p5 hypothetical protein phrog_1689 nucleotide kinase other 1 1393 1662
YP_006383606.1 NC_017980_p25 hypothetical protein phrog_27809 unknown function unknown function -1 17392 17559
YP_006383594.1 NC_017980_p13 hypothetical protein phrog_26303 unknown function unknown function -1 9400 9552
YP_006383583.1 NC_017980_p2 hypothetical protein singleton unknown function unknown function 1 586 888
YP_006383588.1 NC_017980_p7 hypothetical protein phrog_27772 unknown function unknown function 1 2179 2895
YP_006383587.1 NC_017980_p6 hypothetical protein phrog_23266 unknown function unknown function 1 1643 2101
YP_006383585.1 NC_017980_p4 hypothetical protein singleton unknown function unknown function 1 1266 1418
YP_006383603.1 NC_017980_p22 hypothetical protein phrog_25250 unknown function unknown function -1 16119 16415
YP_006383589.1 NC_017980_p8 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 2908 5091
YP_006383600.1 NC_017980_p19 tail protein phrog_16740 tail protein tail -1 12154 13353
YP_006383584.1 NC_017980_p3 hypothetical protein singleton unknown function unknown function 1 1177 1266
YP_006383604.1 NC_017980_p23 SpoVG protein phrog_27338 unknown function unknown function -1 16629 16940
YP_006383601.1 NC_017980_p20 lysozyme-peptidase phrog_16615 peptidase other -1 13356 14945
YP_006383593.1 NC_017980_p12 hypothetical protein phrog_23936 unknown function unknown function -1 8856 9191
YP_006383596.1 NC_017980_p15 hypothetical protein phrog_27689 unknown function unknown function -1 9832 10122