Genomic map of Salisaeta icosahedral phage 1 (SSIP-1) (NC_017983)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_017983
Definition
Salisaeta icosahedral phage 1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA phages.
DB of origin
REFSEQ
Length
43788
Host Name
Salisaeta sp. SP9-1
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
57.22
Number of singletons
47
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006383703.1 NC_017983_p10 hypothetical protein singleton unknown function unknown function -1 5886 6572
YP_006383744.1 NC_017983_p51 hypothetical protein singleton unknown function unknown function 1 38488 38631
YP_006383710.1 NC_017983_p17 hypothetical protein singleton unknown function unknown function 1 10320 10613
YP_006383750.1 NC_017983_p57 hypothetical protein singleton unknown function unknown function 1 41455 43659
YP_006383740.1 NC_017983_p47 hypothetical protein singleton unknown function unknown function 1 36043 36813
YP_006383705.1 NC_017983_p12 hypothetical protein singleton unknown function unknown function -1 6945 7184
YP_006383718.1 NC_017983_p25 hypothetical protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 14166 15014
YP_006383732.1 NC_017983_p39 hypothetical protein singleton unknown function unknown function 1 24501 24773
YP_006383717.1 NC_017983_p24 hypothetical protein singleton unknown function unknown function 1 13789 14118
YP_006383736.1 NC_017983_p43 hypothetical protein phrog_15406 DNA methyltransferase other 1 26863 33822
YP_006383701.1 NC_017983_p8 hypothetical protein singleton unknown function unknown function -1 4961 5404
YP_006383720.1 NC_017983_p27 hypothetical protein singleton unknown function unknown function 1 15782 16726
YP_006383696.1 NC_017983_p3 hypothetical protein phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 1 2589 3188
YP_006383742.1 NC_017983_p49 hypothetical protein singleton unknown function unknown function 1 37235 37858
YP_006383730.1 NC_017983_p37 hypothetical protein singleton unknown function unknown function 1 23394 23783
YP_006383715.1 NC_017983_p22 hypothetical protein singleton unknown function unknown function -1 12471 12938
YP_006383739.1 NC_017983_p46 hypothetical protein singleton unknown function unknown function 1 35324 35959
YP_006383748.1 NC_017983_p55 hypothetical protein singleton unknown function unknown function 1 40372 40647
YP_006383704.1 NC_017983_p11 hypothetical protein singleton unknown function unknown function -1 6589 6798
YP_006383749.1 NC_017983_p56 hypothetical protein singleton unknown function unknown function 1 40651 41451
YP_006383699.1 NC_017983_p6 hypothetical protein singleton unknown function unknown function -1 4146 4487
YP_006383738.1 NC_017983_p45 hypothetical protein singleton unknown function unknown function 1 34635 35267
YP_006383702.1 NC_017983_p9 hypothetical protein singleton unknown function unknown function -1 5379 5669
YP_006383713.1 NC_017983_p20 hypothetical protein singleton unknown function unknown function 1 11699 12058
YP_006383746.1 NC_017983_p53 hypothetical protein singleton unknown function unknown function 1 39223 39777
YP_006383733.1 NC_017983_p40 hypothetical protein phrog_6891 ATPase other 1 24775 25737
YP_006383727.1 NC_017983_p34 hypothetical protein singleton unknown function unknown function 1 21296 22210
YP_006383714.1 NC_017983_p21 hypothetical protein singleton unknown function unknown function 1 12046 12396
YP_006383743.1 NC_017983_p50 hypothetical protein singleton unknown function unknown function 1 37855 38385
YP_006383709.1 NC_017983_p16 hypothetical protein singleton unknown function unknown function 1 9735 10211
YP_006383694.1 NC_017983_p1 hypothetical protein singleton unknown function unknown function 1 53 1192
YP_006383712.1 NC_017983_p19 hypothetical protein singleton unknown function unknown function 1 11401 11628
YP_006383716.1 NC_017983_p23 hypothetical protein phrog_4 transcriptional repressor transcription regulation -1 12931 13482
YP_006383725.1 NC_017983_p32 hypothetical protein singleton unknown function unknown function 1 19687 19929
YP_006383726.1 NC_017983_p33 hypothetical protein singleton unknown function unknown function 1 20025 21287
YP_006383724.1 NC_017983_p31 hypothetical protein phrog_315 endolysin lysis 1 18868 19422
YP_006383734.1 NC_017983_p41 hypothetical protein phrog_18108 unknown function unknown function 1 25740 26612
YP_006383728.1 NC_017983_p35 hypothetical protein singleton unknown function unknown function 1 22213 22848
YP_006383723.1 NC_017983_p30 hypothetical protein singleton unknown function unknown function 1 18095 18613
YP_006383695.1 NC_017983_p2 hypothetical protein phrog_351 RNA polymerase sigma factor transcription regulation 1 1429 2451
YP_006383737.1 NC_017983_p44 hypothetical protein singleton unknown function unknown function 1 33840 34565
YP_006383707.1 NC_017983_p14 hypothetical protein singleton unknown function unknown function -1 8700 9128
YP_006383708.1 NC_017983_p15 hypothetical protein phrog_8 transcriptional regulator transcription regulation -1 9181 9519
YP_006383729.1 NC_017983_p36 hypothetical protein singleton unknown function unknown function 1 22845 23201
YP_006383741.1 NC_017983_p48 hypothetical protein singleton unknown function unknown function 1 36806 37204
YP_006383745.1 NC_017983_p52 hypothetical protein singleton unknown function unknown function 1 38636 39223
YP_006383722.1 NC_017983_p29 hypothetical protein phrog_463 anti-repressor transcription regulation 1 17254 18081
YP_006383747.1 NC_017983_p54 hypothetical protein singleton unknown function unknown function 1 39770 40363
YP_006383697.1 NC_017983_p4 hypothetical protein singleton unknown function unknown function 1 3343 3591
YP_006383719.1 NC_017983_p26 hypothetical protein singleton unknown function unknown function 1 15313 15738
YP_006383698.1 NC_017983_p5 hypothetical protein singleton unknown function unknown function -1 3653 4087
YP_006383735.1 NC_017983_p42 hypothetical protein singleton unknown function unknown function 1 26612 26866
YP_006383700.1 NC_017983_p7 hypothetical protein singleton unknown function unknown function -1 4500 4778
YP_006383711.1 NC_017983_p18 hypothetical protein singleton unknown function unknown function 1 10741 11256
YP_006383721.1 NC_017983_p28 hypothetical protein singleton unknown function unknown function 1 16790 17050
YP_006383706.1 NC_017983_p13 hypothetical protein singleton unknown function unknown function -1 7231 8694
YP_006383731.1 NC_017983_p38 hypothetical protein singleton unknown function unknown function 1 23783 24520