Genomic map of Clostridium phage phiCPV4 (NC_018083)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Clostridium phage phiCPV4, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
Host Name
Clostridium perfringens
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006488643.1 NC_018083_p28 hypothetical protein singleton unknown function unknown function -1 17626 17775
YP_006488637.1 NC_018083_p22 hypothetical protein phrog_25250 unknown function unknown function -1 15834 16130
YP_006488629.1 NC_018083_p14 hypothetical protein phrog_13286 tail protein tail -1 9282 9551
YP_006488623.1 NC_018083_p8 DNA encapsidation protein phrog_2150 terminase head and packaging 1 4873 5916
YP_006488634.1 NC_018083_p19 tail protein phrog_16740 tail protein tail -1 11870 13069
YP_006488640.1 NC_018083_p25 hypothetical protein phrog_27809 unknown function unknown function -1 17107 17274
YP_006488628.1 NC_018083_p13 hypothetical protein phrog_26303 unknown function unknown function -1 9116 9268
YP_006488621.1 NC_018083_p6 hypothetical protein phrog_27772 unknown function unknown function 1 1895 2611
YP_006488635.1 NC_018083_p20 lysozyme-peptidase phrog_16615 peptidase other -1 13071 14660
YP_006488616.1 NC_018083_p1 hypothetical protein phrog_26256 unknown function unknown function 1 164 388
YP_006488633.1 NC_018083_p18 hypothetical protein phrog_4898 holin lysis -1 11539 11793
YP_006488619.1 NC_018083_p4 hypothetical protein phrog_4943 unknown function unknown function 1 980 1378
YP_006488630.1 NC_018083_p15 hypothetical protein phrog_27689 unknown function unknown function -1 9548 9838
YP_006488641.1 NC_018083_p26 hypothetical protein singleton unknown function unknown function -1 17249 17446
YP_006488627.1 NC_018083_p12 hypothetical protein singleton unknown function unknown function -1 8923 9063
YP_006488620.1 NC_018083_p5 hypothetical protein phrog_23266 unknown function unknown function 1 1359 1817
YP_006488625.1 NC_018083_p10 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis -1 7889 8572
YP_006488631.1 NC_018083_p16 collar protein phrog_5472 lower collar tail -1 9974 10663
YP_006488636.1 NC_018083_p21 major head protein phrog_2006 major head protein head and packaging -1 14710 15822
YP_006488624.1 NC_018083_p9 pre-neck appendage protein phrog_17212 pre-neck appendage protein connector -1 5948 7822
YP_006488639.1 NC_018083_p24 hypothetical protein phrog_24415 unknown function unknown function -1 16724 16924
YP_006488618.1 NC_018083_p3 hypothetical protein phrog_29994 unknown function unknown function 1 707 889
YP_006488617.1 NC_018083_p2 hypothetical protein singleton unknown function unknown function 1 447 602
YP_006488642.1 NC_018083_p27 hypothetical protein singleton unknown function unknown function -1 17439 17615
YP_006488626.1 NC_018083_p11 hypothetical protein phrog_23936 unknown function unknown function -1 8572 8907
YP_006488632.1 NC_018083_p17 connector protein phrog_2038 upper collar connector connector -1 10641 11546
YP_006488622.1 NC_018083_p7 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 2624 4807
YP_006488638.1 NC_018083_p23 SpoVG protein phrog_27338 unknown function unknown function -1 16344 16655