| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018084 |
Definition |
Clostridium phage phiZP2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
18078 |
Host Name |
Clostridium perfringens |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
27 |
%GC |
34.47 |
Number of singletons |
5 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006488662.1 | NC_018084_p19 | hypothetical protein | phrog_4898 | holin | lysis | -1 | 11918 | 12172 |
| YP_006488647.1 | NC_018084_p4 | hypothetical protein | phrog_29994 | unknown function | unknown function | 1 | 1083 | 1268 |
| YP_006488657.1 | NC_018084_p14 | hypothetical protein | phrog_26303 | unknown function | unknown function | -1 | 9303 | 9647 |
| YP_006488670.1 | NC_018084_p27 | hypothetical protein | phrog_27809 | unknown function | unknown function | -1 | 17489 | 17656 |
| YP_006488645.1 | NC_018084_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 592 | 786 |
| YP_006488663.1 | NC_018084_p20 | tail protein | phrog_16740 | tail protein | tail | -1 | 12249 | 13448 |
| YP_006488655.1 | NC_018084_p12 | N-acetylmuramoyl-L-alanine amidase | phrog_822 | amidase | lysis | -1 | 8272 | 8952 |
| YP_006488651.1 | NC_018084_p8 | hypothetical protein | phrog_27772 | unknown function | unknown function | 1 | 2285 | 3001 |
| YP_006488658.1 | NC_018084_p15 | hypothetical protein | phrog_13286 | tail protein | tail | -1 | 9661 | 9930 |
| YP_006488667.1 | NC_018084_p24 | SpoVG protein | phrog_27338 | unknown function | unknown function | -1 | 16726 | 17037 |
| YP_006488648.1 | NC_018084_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1359 | 1637 |
| YP_006488659.1 | NC_018084_p16 | hypothetical protein | phrog_27689 | unknown function | unknown function | -1 | 9927 | 10217 |
| YP_006488665.1 | NC_018084_p22 | major head protein | phrog_2006 | major head protein | head and packaging | -1 | 15087 | 16202 |
| YP_006488650.1 | NC_018084_p7 | hypothetical protein | phrog_23266 | unknown function | unknown function | 1 | 1749 | 2207 |
| YP_006488661.1 | NC_018084_p18 | connector protein | phrog_2038 | upper collar connector | connector | -1 | 11020 | 11925 |
| YP_006488654.1 | NC_018084_p11 | pre-neck appendage protein | phrog_17212 | pre-neck appendage protein | connector | -1 | 6310 | 8205 |
| YP_006488653.1 | NC_018084_p10 | DNA encapsidation protein | phrog_2150 | terminase | head and packaging | 1 | 5235 | 6278 |
| YP_006488656.1 | NC_018084_p13 | hypothetical protein | phrog_23936 | unknown function | unknown function | -1 | 8952 | 9287 |
| YP_006488669.1 | NC_018084_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 17328 | 17471 |
| YP_006488666.1 | NC_018084_p23 | hypothetical protein | phrog_25250 | unknown function | unknown function | -1 | 16216 | 16512 |
| YP_006488646.1 | NC_018084_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 799 | 978 |
| YP_006488649.1 | NC_018084_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1625 | 1768 |
| YP_006488652.1 | NC_018084_p9 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 3013 | 5196 |
| YP_006488668.1 | NC_018084_p25 | hypothetical protein | phrog_24415 | unknown function | unknown function | -1 | 17106 | 17306 |
| YP_006488664.1 | NC_018084_p21 | lysozyme-peptidase | phrog_16615 | peptidase | other | -1 | 13450 | 15039 |
| YP_006488644.1 | NC_018084_p1 | hypothetical protein | phrog_33044 | unknown function | unknown function | 1 | 162 | 539 |
| YP_006488660.1 | NC_018084_p17 | collar protein | phrog_5472 | lower collar | tail | -1 | 10353 | 11042 |