Genomic map of Colwellia phage 9A (NC_018088)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018088
Definition
Colwellia phage 9A, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Franklinbayvirus; Colwellia virus 9A.
DB of origin
REFSEQ
Length
104936
Host Name
Colwellia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
149
%GC
36.61
Number of singletons
103
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006489290.1 NC_018088_p104 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism 1 83173 83751
YP_006489312.1 NC_018088_p126 hypothetical protein singleton unknown function unknown function 1 92936 93184
YP_006489289.1 NC_018088_p103 hypothetical protein singleton unknown function unknown function 1 82869 83183
YP_006489246.1 NC_018088_p60 slt family transglycosylase singleton unknown function unknown function -1 45627 46115
YP_006489233.1 NC_018088_p47 hypothetical protein singleton unknown function unknown function -1 27859 28239
YP_006489224.1 NC_018088_p38 hypothetical protein singleton unknown function unknown function 1 19330 19962
YP_006489275.1 NC_018088_p89 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 76869 78302
YP_006489282.1 NC_018088_p96 hypothetical protein singleton unknown function unknown function 1 80941 81141
YP_006489314.1 NC_018088_p128 hypothetical protein singleton unknown function unknown function -1 95572 95781
YP_006489193.1 NC_018088_p7 hypothetical protein singleton unknown function unknown function -1 2640 3038
YP_006489195.1 NC_018088_p9 hypothetical protein singleton unknown function unknown function 1 3434 3598
YP_006489243.1 NC_018088_p57 hypothetical protein singleton unknown function unknown function -1 41823 42227
YP_006489265.1 NC_018088_p79 hypothetical protein singleton unknown function unknown function 1 67256 68368
YP_006489333.1 NC_018088_p147 hypothetical protein singleton unknown function unknown function -1 103679 103939
YP_006489263.1 NC_018088_p77 deoxyribonuclease phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 63253 64557
YP_006489208.1 NC_018088_p22 metal dependent phosphohydrolase phrog_990 metal-dependent phosphohydrolase other 1 10383 10919
YP_006489274.1 NC_018088_p88 DNA adenine methylase phrog_56 DNA methyltransferase other 1 76004 76867
YP_006489285.1 NC_018088_p99 hypothetical protein phrog_464 unknown function unknown function 1 81602 81943
YP_006489189.1 NC_018088_p3 hypothetical protein singleton unknown function unknown function -1 1295 1756
YP_006489213.1 NC_018088_p27 hypothetical protein singleton unknown function unknown function 1 12813 13205
YP_006489214.1 NC_018088_p28 hypothetical protein singleton unknown function unknown function 1 13180 13428
YP_006489228.1 NC_018088_p42 lysozyme phrog_7 endolysin lysis -1 22214 22804
YP_006489220.1 NC_018088_p34 hypothetical protein phrog_1499 unknown function unknown function 1 16540 17889
YP_006489236.1 NC_018088_p50 hypothetical protein singleton unknown function unknown function -1 31704 33497
YP_006489326.1 NC_018088_p140 hypothetical protein singleton unknown function unknown function -1 100207 100509
YP_006489230.1 NC_018088_p44 hypothetical protein singleton unknown function unknown function -1 23373 24575
YP_006489227.1 NC_018088_p41 hypothetical protein phrog_36050 unknown function unknown function -1 21732 22217
YP_006489329.1 NC_018088_p143 hypothetical protein singleton unknown function unknown function -1 101722 101871
YP_006489264.1 NC_018088_p78 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 64569 67211
YP_006489240.1 NC_018088_p54 tail assembly protein phrog_4554 tail protein tail -1 40349 40936
YP_006489218.1 NC_018088_p32 polynucleotide kinase/phosphorylase phrog_415 polynucleotide kinase other 1 15404 15901
YP_006489266.1 NC_018088_p80 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 68418 69833
YP_006489259.1 NC_018088_p73 hypothetical protein singleton unknown function unknown function -1 56521 57096
YP_006489262.1 NC_018088_p76 DNA primase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 61389 63272
YP_006489291.1 NC_018088_p105 hypothetical protein phrog_9782 unknown function unknown function 1 83741 84082
YP_006489199.1 NC_018088_p13 hypothetical protein singleton unknown function unknown function 1 5178 5570
YP_006489303.1 NC_018088_p117 hypothetical protein singleton unknown function unknown function 1 89148 89483
YP_006489273.1 NC_018088_p87 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 75436 76011
YP_006489209.1 NC_018088_p23 hypothetical protein phrog_3292 unknown function unknown function 1 10952 11200
YP_006489267.1 NC_018088_p81 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 69830 70537
YP_006489200.1 NC_018088_p14 hypothetical protein phrog_34361 unknown function unknown function 1 5688 6134
YP_006489311.1 NC_018088_p125 hypothetical protein singleton unknown function unknown function 1 92585 92785
YP_006489316.1 NC_018088_p130 hypothetical protein singleton unknown function unknown function -1 96083 96280
YP_006489217.1 NC_018088_p31 dihydrofolate reductase type I phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 14773 15285
YP_006489194.1 NC_018088_p8 hypothetical protein phrog_32425 unknown function unknown function -1 3131 3415
YP_006489305.1 NC_018088_p119 hypothetical protein singleton unknown function unknown function 1 90125 90364
YP_006489310.1 NC_018088_p124 hypothetical protein phrog_2072 unknown function unknown function 1 92090 92584
YP_006489284.1 NC_018088_p98 hypothetical protein singleton unknown function unknown function 1 81409 81618
YP_006489288.1 NC_018088_p102 hypothetical protein singleton unknown function unknown function 1 82630 82869
YP_006489239.1 NC_018088_p53 tail protein phrog_31 central tail fiber J tail -1 35203 40335
YP_006489292.1 NC_018088_p106 hypothetical protein singleton unknown function unknown function 1 84088 84426
YP_006489306.1 NC_018088_p120 hypothetical protein singleton unknown function unknown function 1 90364 90675
YP_006489211.1 NC_018088_p25 hypothetical protein singleton unknown function unknown function 1 11862 12521
YP_006489277.1 NC_018088_p91 hypothetical protein singleton unknown function unknown function 1 78437 78844
YP_006489219.1 NC_018088_p33 hypothetical protein singleton unknown function unknown function 1 15970 16530
YP_006489242.1 NC_018088_p56 minor tail protein L singleton unknown function unknown function -1 41251 41814
YP_006489299.1 NC_018088_p113 hypothetical protein singleton unknown function unknown function 1 87279 87785
YP_006489258.1 NC_018088_p72 terminase phrog_2 terminase large subunit head and packaging -1 54916 56511
YP_006489308.1 NC_018088_p122 hypothetical protein singleton unknown function unknown function 1 91204 91701
YP_006489293.1 NC_018088_p107 hypothetical protein phrog_33484 unknown function unknown function 1 84419 84772
YP_006489294.1 NC_018088_p108 hypothetical protein phrog_1158 tail assembly chaperone tail 1 84864 85490
YP_006489198.1 NC_018088_p12 hypothetical protein singleton unknown function unknown function 1 4906 5172
YP_006489250.1 NC_018088_p64 hypothetical protein singleton unknown function unknown function -1 48315 48710
YP_006489300.1 NC_018088_p114 hypothetical protein singleton unknown function unknown function 1 87785 88036
YP_006489202.1 NC_018088_p16 nicotinamide phosphoribosyl transferase phrog_448 nicotinamide phosphoribosyl transferase other 1 7289 8746
YP_006489232.1 NC_018088_p46 hypothetical protein singleton unknown function unknown function -1 26486 27778
YP_006489192.1 NC_018088_p6 hypothetical protein singleton unknown function unknown function -1 2395 2640
YP_006489215.1 NC_018088_p29 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 13425 14276
YP_006489283.1 NC_018088_p97 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism 1 81138 81428
YP_006489331.1 NC_018088_p145 hypothetical protein singleton unknown function unknown function -1 102113 102769
YP_006489248.1 NC_018088_p62 hypothetical protein phrog_290 minor tail protein tail -1 46545 47777
YP_006489321.1 NC_018088_p135 hypothetical protein singleton unknown function unknown function -1 98286 98633
YP_006489257.1 NC_018088_p71 hypothetical protein phrog_113 portal protein head and packaging -1 53354 54907
YP_006489241.1 NC_018088_p55 tail component protein phrog_2635 tail protein tail -1 40920 41246
YP_006489210.1 NC_018088_p24 thiamine pyrophosphate enzyme family protein singleton unknown function unknown function 1 11200 11853
YP_006489304.1 NC_018088_p118 hypothetical protein singleton unknown function unknown function 1 89458 90039
YP_006489325.1 NC_018088_p139 hypothetical protein singleton unknown function unknown function -1 99875 100123
YP_006489286.1 NC_018088_p100 hypothetical protein singleton unknown function unknown function 1 81940 82257
YP_006489335.1 NC_018088_p149 hypothetical protein singleton unknown function unknown function -1 104636 104936
YP_006489287.1 NC_018088_p101 hypothetical protein singleton unknown function unknown function 1 82257 82571
YP_006489252.1 NC_018088_p66 hypothetical protein singleton unknown function unknown function -1 49465 49953
YP_006489191.1 NC_018088_p5 hypothetical protein singleton unknown function unknown function -1 2093 2317
YP_006489327.1 NC_018088_p141 hypothetical protein singleton unknown function unknown function -1 100760 101050
YP_006489271.1 NC_018088_p85 hypothetical protein phrog_717 unknown function unknown function 1 74851 75264
YP_006489317.1 NC_018088_p131 hypothetical protein singleton unknown function unknown function -1 96362 96580
YP_006489269.1 NC_018088_p83 ribonucleotide-diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 72827 73963
YP_006489302.1 NC_018088_p116 hypothetical protein singleton unknown function unknown function 1 88688 89044
YP_006489261.1 NC_018088_p75 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism -1 58493 61129
YP_006489201.1 NC_018088_p15 cytidyltransferase-like protein phrog_395 cytidyltransferase other 1 6136 7236
YP_006489298.1 NC_018088_p112 hypothetical protein singleton unknown function unknown function 1 86996 87289
YP_006489309.1 NC_018088_p123 hypothetical protein singleton unknown function unknown function 1 91819 92115
YP_006489204.1 NC_018088_p18 hypothetical protein singleton unknown function unknown function 1 9535 9741
YP_006489318.1 NC_018088_p132 hypothetical protein singleton unknown function unknown function -1 96677 97015
YP_006489207.1 NC_018088_p21 hypothetical protein singleton unknown function unknown function 1 10133 10381
YP_006489322.1 NC_018088_p136 hypothetical protein singleton unknown function unknown function -1 98705 99139
YP_006489249.1 NC_018088_p63 hypothetical protein singleton unknown function unknown function -1 47789 48313
YP_006489295.1 NC_018088_p109 hypothetical protein phrog_18599 unknown function unknown function 1 85554 86117
YP_006489270.1 NC_018088_p84 glutaredoxin 3 phrog_3301 pyrophosphatase other 1 73975 74766
YP_006489320.1 NC_018088_p134 hypothetical protein singleton unknown function unknown function -1 97718 97891
YP_006489237.1 NC_018088_p51 hypothetical protein singleton unknown function unknown function -1 33520 34656
YP_006489197.1 NC_018088_p11 hypothetical protein singleton unknown function unknown function 1 4704 4940
YP_006489221.1 NC_018088_p35 hypothetical protein singleton unknown function unknown function 1 17960 18412
YP_006489272.1 NC_018088_p86 hypothetical protein singleton unknown function unknown function 1 75248 75433
YP_006489313.1 NC_018088_p127 hypothetical protein singleton unknown function unknown function 1 93210 93437
YP_006489280.1 NC_018088_p94 hypothetical protein singleton unknown function unknown function 1 80042 80515
YP_006489226.1 NC_018088_p40 hypothetical protein singleton unknown function unknown function -1 20563 21735
YP_006489324.1 NC_018088_p138 hypothetical protein phrog_17661 unknown function unknown function -1 99591 99875
YP_006489268.1 NC_018088_p82 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 70546 72807
YP_006489225.1 NC_018088_p39 hypothetical protein phrog_600 unknown function unknown function 1 19955 20500
YP_006489216.1 NC_018088_p30 hypothetical protein singleton unknown function unknown function 1 14329 14760
YP_006489301.1 NC_018088_p115 hypothetical protein singleton unknown function unknown function 1 88049 88672
YP_006489245.1 NC_018088_p59 hypothetical protein singleton unknown function unknown function -1 45304 45612
YP_006489203.1 NC_018088_p17 hypothetical protein singleton unknown function unknown function 1 8844 9533
YP_006489255.1 NC_018088_p69 hypothetical protein phrog_1530 DNA methyltransferase other -1 52630 53034
YP_006489276.1 NC_018088_p90 hypothetical protein singleton unknown function unknown function 1 78286 78435
YP_006489334.1 NC_018088_p148 hypothetical protein singleton unknown function unknown function -1 103994 104305
YP_006489235.1 NC_018088_p49 hypothetical protein phrog_4176 tail fiber protein tail -1 30763 31686
YP_006489196.1 NC_018088_p10 hypothetical protein singleton unknown function unknown function 1 3636 4016
YP_006489319.1 NC_018088_p133 hypothetical protein singleton unknown function unknown function -1 97205 97621
YP_006489187.1 NC_018088_p1 hypothetical protein singleton unknown function unknown function -1 168 608
YP_006489297.1 NC_018088_p111 hypothetical protein singleton unknown function unknown function 1 86703 86942
YP_006489330.1 NC_018088_p144 hypothetical protein singleton unknown function unknown function -1 101868 102113
YP_006489222.1 NC_018088_p36 hypothetical protein singleton unknown function unknown function 1 18414 18866
YP_006489212.1 NC_018088_p26 hypothetical protein singleton unknown function unknown function 1 12512 12811
YP_006489279.1 NC_018088_p93 hypothetical protein singleton unknown function unknown function 1 79352 80032
YP_006489296.1 NC_018088_p110 hypothetical protein singleton unknown function unknown function 1 86117 86713
YP_006489223.1 NC_018088_p37 hypothetical protein singleton unknown function unknown function 1 18879 19289
YP_006489231.1 NC_018088_p45 hypothetical protein singleton unknown function unknown function -1 24575 26416
YP_006489254.1 NC_018088_p68 hypothetical protein singleton unknown function unknown function -1 51332 52633
YP_006489281.1 NC_018088_p95 hypothetical protein singleton unknown function unknown function 1 80589 80930
YP_006489205.1 NC_018088_p19 hypothetical protein singleton unknown function unknown function 1 9741 9941
YP_006489256.1 NC_018088_p70 hypothetical protein singleton unknown function unknown function -1 53043 53345
YP_006489238.1 NC_018088_p52 hypothetical protein singleton unknown function unknown function -1 34681 35166
YP_006489206.1 NC_018088_p20 hypothetical protein singleton unknown function unknown function 1 9934 10140
YP_006489278.1 NC_018088_p92 hypothetical protein singleton unknown function unknown function 1 78831 79352
YP_006489315.1 NC_018088_p129 hypothetical protein singleton unknown function unknown function -1 95781 95993
YP_006489188.1 NC_018088_p2 hypothetical protein singleton unknown function unknown function -1 713 1219
YP_006489251.1 NC_018088_p65 hypothetical protein singleton unknown function unknown function -1 48700 49455
YP_006489323.1 NC_018088_p137 hypothetical protein phrog_12820 unknown function unknown function -1 99229 99534
YP_006489260.1 NC_018088_p74 hypothetical protein singleton unknown function unknown function -1 57982 58512
YP_006489253.1 NC_018088_p67 hypothetical protein phrog_1005 major head protein head and packaging -1 50059 51267
YP_006489307.1 NC_018088_p121 hypothetical protein singleton unknown function unknown function 1 90669 91094
YP_006489190.1 NC_018088_p4 hypothetical protein singleton unknown function unknown function -1 1800 2015
YP_006489229.1 NC_018088_p43 tail protein singleton unknown function unknown function -1 22812 23288
YP_006489328.1 NC_018088_p142 hypothetical protein singleton unknown function unknown function -1 101203 101691
YP_006489247.1 NC_018088_p61 hypothetical protein phrog_169 tail completion or Neck1 protein connector -1 46126 46545
YP_006489244.1 NC_018088_p58 tail tape measure protein singleton unknown function unknown function -1 42233 45301
YP_006489332.1 NC_018088_p146 hypothetical protein singleton unknown function unknown function -1 102863 103375
YP_006489234.1 NC_018088_p48 hypothetical protein singleton unknown function unknown function -1 28322 30766