Genomic map of Thermoanaerobacterium phage THSA-485A (NC_018264)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018264
Definition
Thermoanaerobacterium phage THSA-485A, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
41938
Host Name
Thermoanaerobacterium saccharolyticum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
36.77
Number of singletons
31
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006546286.1 NC_018264_p17 hypothetical protein singleton unknown function unknown function -1 8444 9709
YP_006546305.1 NC_018264_p36 hypothetical protein singleton unknown function unknown function -1 27980 28198
YP_006546321.1 NC_018264_p52 transcriptional regulator, XRE family phrog_8 transcriptional regulator transcription regulation -1 38429 38860
YP_006546287.1 NC_018264_p18 hypothetical protein phrog_5417 unknown function unknown function -1 9723 10184
YP_006546284.1 NC_018264_p15 hypothetical protein singleton unknown function unknown function -1 7869 8027
YP_006546324.1 NC_018264_p55 transcriptional regulator, XRE family phrog_8 transcriptional regulator transcription regulation 1 39447 39893
YP_006546313.1 NC_018264_p44 hypothetical protein singleton unknown function unknown function -1 33690 33899
YP_006546326.1 NC_018264_p57 Recombinase phrog_95 integrase integration and excision 1 40372 41898
YP_006546276.1 NC_018264_p7 hypothetical protein singleton unknown function unknown function -1 3160 3417
YP_006546285.1 NC_018264_p16 hypothetical protein singleton unknown function unknown function -1 8024 8431
YP_006546291.1 NC_018264_p22 hypothetical protein singleton unknown function unknown function -1 15751 16083
YP_006546294.1 NC_018264_p25 hypothetical protein singleton unknown function unknown function -1 17967 18137
YP_006546290.1 NC_018264_p21 hypothetical protein phrog_58 tail length tape measure protein tail -1 12877 15555
YP_006546314.1 NC_018264_p45 hypothetical protein phrog_23155 unknown function unknown function -1 33996 34733
YP_006546310.1 NC_018264_p41 hypothetical protein phrog_11376 unknown function unknown function -1 30011 30307
YP_006546272.1 NC_018264_p3 hypothetical protein singleton unknown function unknown function -1 960 1337
YP_006546319.1 NC_018264_p50 SNF2-related protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 36458 38101
YP_006546292.1 NC_018264_p23 hypothetical protein phrog_888 unknown function unknown function -1 16155 16970
YP_006546277.1 NC_018264_p8 hypothetical protein singleton unknown function unknown function -1 3519 4013
YP_006546322.1 NC_018264_p53 hypothetical protein singleton unknown function unknown function -1 38839 39021
YP_006546274.1 NC_018264_p5 protein of unknown function DUF1874 phrog_5063 unknown function unknown function -1 2077 2385
YP_006546318.1 NC_018264_p49 hypothetical protein singleton unknown function unknown function -1 36290 36406
YP_006546282.1 NC_018264_p13 hypothetical protein singleton unknown function unknown function -1 7272 7574
YP_006546273.1 NC_018264_p4 hypothetical protein singleton unknown function unknown function -1 1399 2040
YP_006546288.1 NC_018264_p19 hypothetical protein singleton unknown function unknown function -1 10175 11557
YP_006546308.1 NC_018264_p39 hypothetical protein phrog_7024 unknown function unknown function -1 29504 29722
YP_006546278.1 NC_018264_p9 hypothetical protein singleton unknown function unknown function -1 4387 4893
YP_006546293.1 NC_018264_p24 hypothetical protein phrog_290 minor tail protein tail -1 17041 17964
YP_006546275.1 NC_018264_p6 hypothetical protein singleton unknown function unknown function -1 2405 2863
YP_006546316.1 NC_018264_p47 hypothetical protein singleton unknown function unknown function -1 35501 35851
YP_006546302.1 NC_018264_p33 hypothetical protein phrog_2662 portal protein head and packaging -1 23917 26286
YP_006546325.1 NC_018264_p56 protein of unknown function DUF955 phrog_87 metallo-protease other 1 39932 40369
YP_006546303.1 NC_018264_p34 phage terminase, large subunit, PBSX family phrog_2 terminase large subunit head and packaging -1 26286 27524
YP_006546306.1 NC_018264_p37 RinA family protein phage transcriptional regulator singleton transcriptional regulator transcription regulation -1 28374 28850
YP_006546271.1 NC_018264_p2 hypothetical protein singleton unknown function unknown function -1 497 862
YP_006546279.1 NC_018264_p10 peptidase C1A papain phrog_16701 peptidase other -1 4912 5745
YP_006546301.1 NC_018264_p32 hypothetical protein singleton unknown function unknown function -1 21759 23744
YP_006546300.1 NC_018264_p31 hypothetical protein phrog_13692 unknown function unknown function -1 20344 21756
YP_006546289.1 NC_018264_p20 hypothetical protein singleton unknown function unknown function -1 11572 12873
YP_006546307.1 NC_018264_p38 hypothetical protein singleton unknown function unknown function -1 28853 29335
YP_006546320.1 NC_018264_p51 hypothetical protein singleton unknown function unknown function -1 38198 38428
YP_006546309.1 NC_018264_p40 VRR-NUC domain-containing protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 29695 30027
YP_006546280.1 NC_018264_p11 glycoside hydrolase family 25 phrog_6219 endolysin lysis -1 5761 6666
YP_006546315.1 NC_018264_p46 hypothetical protein phrog_210 unknown function unknown function -1 34755 35498
YP_006546270.1 NC_018264_p1 CopG-like domain-containing protein DNA-binding protein singleton unknown function unknown function -1 86 433
YP_006546296.1 NC_018264_p27 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 18589 19026
YP_006546283.1 NC_018264_p14 hypothetical protein singleton unknown function unknown function -1 7582 7836
YP_006546281.1 NC_018264_p12 hypothetical protein phrog_8048 HNH endonuclease DNA, RNA and nucleotide metabolism -1 6784 7275
YP_006546299.1 NC_018264_p30 hypothetical protein singleton unknown function unknown function -1 20073 20285
YP_006546297.1 NC_018264_p28 hypothetical protein singleton unknown function unknown function -1 19027 19833
YP_006546312.1 NC_018264_p43 protein of unknown function DUF927 phrog_8841 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 31169 33661
YP_006546295.1 NC_018264_p26 hypothetical protein singleton unknown function unknown function -1 18154 18588
YP_006546304.1 NC_018264_p35 hypothetical protein phrog_2538 terminase small subunit head and packaging -1 27517 27906
YP_006546317.1 NC_018264_p48 hypothetical protein phrog_2378 unknown function unknown function -1 35875 36276
YP_006546311.1 NC_018264_p42 hypothetical protein singleton unknown function unknown function -1 30321 30803
YP_006546298.1 NC_018264_p29 hypothetical protein singleton unknown function unknown function -1 19844 20083
YP_006546323.1 NC_018264_p54 helix-turn-helix domain protein phrog_3 transcriptional repressor transcription regulation -1 39022 39279