| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018264 |
Definition |
Thermoanaerobacterium phage THSA-485A, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
41938 |
Host Name |
Thermoanaerobacterium saccharolyticum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
57 |
%GC |
36.77 |
Number of singletons |
31 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006546286.1 | NC_018264_p17 | hypothetical protein | singleton | unknown function | unknown function | -1 | 8444 | 9709 |
| YP_006546305.1 | NC_018264_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27980 | 28198 |
| YP_006546321.1 | NC_018264_p52 | transcriptional regulator, XRE family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 38429 | 38860 |
| YP_006546287.1 | NC_018264_p18 | hypothetical protein | phrog_5417 | unknown function | unknown function | -1 | 9723 | 10184 |
| YP_006546284.1 | NC_018264_p15 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7869 | 8027 |
| YP_006546324.1 | NC_018264_p55 | transcriptional regulator, XRE family | phrog_8 | transcriptional regulator | transcription regulation | 1 | 39447 | 39893 |
| YP_006546313.1 | NC_018264_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33690 | 33899 |
| YP_006546326.1 | NC_018264_p57 | Recombinase | phrog_95 | integrase | integration and excision | 1 | 40372 | 41898 |
| YP_006546276.1 | NC_018264_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3160 | 3417 |
| YP_006546285.1 | NC_018264_p16 | hypothetical protein | singleton | unknown function | unknown function | -1 | 8024 | 8431 |
| YP_006546291.1 | NC_018264_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15751 | 16083 |
| YP_006546294.1 | NC_018264_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 17967 | 18137 |
| YP_006546290.1 | NC_018264_p21 | hypothetical protein | phrog_58 | tail length tape measure protein | tail | -1 | 12877 | 15555 |
| YP_006546314.1 | NC_018264_p45 | hypothetical protein | phrog_23155 | unknown function | unknown function | -1 | 33996 | 34733 |
| YP_006546310.1 | NC_018264_p41 | hypothetical protein | phrog_11376 | unknown function | unknown function | -1 | 30011 | 30307 |
| YP_006546272.1 | NC_018264_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 960 | 1337 |
| YP_006546319.1 | NC_018264_p50 | SNF2-related protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 36458 | 38101 |
| YP_006546292.1 | NC_018264_p23 | hypothetical protein | phrog_888 | unknown function | unknown function | -1 | 16155 | 16970 |
| YP_006546277.1 | NC_018264_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3519 | 4013 |
| YP_006546322.1 | NC_018264_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38839 | 39021 |
| YP_006546274.1 | NC_018264_p5 | protein of unknown function DUF1874 | phrog_5063 | unknown function | unknown function | -1 | 2077 | 2385 |
| YP_006546318.1 | NC_018264_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36290 | 36406 |
| YP_006546282.1 | NC_018264_p13 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7272 | 7574 |
| YP_006546273.1 | NC_018264_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1399 | 2040 |
| YP_006546288.1 | NC_018264_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 10175 | 11557 |
| YP_006546308.1 | NC_018264_p39 | hypothetical protein | phrog_7024 | unknown function | unknown function | -1 | 29504 | 29722 |
| YP_006546278.1 | NC_018264_p9 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4387 | 4893 |
| YP_006546293.1 | NC_018264_p24 | hypothetical protein | phrog_290 | minor tail protein | tail | -1 | 17041 | 17964 |
| YP_006546275.1 | NC_018264_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2405 | 2863 |
| YP_006546316.1 | NC_018264_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35501 | 35851 |
| YP_006546302.1 | NC_018264_p33 | hypothetical protein | phrog_2662 | portal protein | head and packaging | -1 | 23917 | 26286 |
| YP_006546325.1 | NC_018264_p56 | protein of unknown function DUF955 | phrog_87 | metallo-protease | other | 1 | 39932 | 40369 |
| YP_006546303.1 | NC_018264_p34 | phage terminase, large subunit, PBSX family | phrog_2 | terminase large subunit | head and packaging | -1 | 26286 | 27524 |
| YP_006546306.1 | NC_018264_p37 | RinA family protein phage transcriptional regulator | singleton | transcriptional regulator | transcription regulation | -1 | 28374 | 28850 |
| YP_006546271.1 | NC_018264_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 497 | 862 |
| YP_006546279.1 | NC_018264_p10 | peptidase C1A papain | phrog_16701 | peptidase | other | -1 | 4912 | 5745 |
| YP_006546301.1 | NC_018264_p32 | hypothetical protein | singleton | unknown function | unknown function | -1 | 21759 | 23744 |
| YP_006546300.1 | NC_018264_p31 | hypothetical protein | phrog_13692 | unknown function | unknown function | -1 | 20344 | 21756 |
| YP_006546289.1 | NC_018264_p20 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11572 | 12873 |
| YP_006546307.1 | NC_018264_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28853 | 29335 |
| YP_006546320.1 | NC_018264_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38198 | 38428 |
| YP_006546309.1 | NC_018264_p40 | VRR-NUC domain-containing protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 29695 | 30027 |
| YP_006546280.1 | NC_018264_p11 | glycoside hydrolase family 25 | phrog_6219 | endolysin | lysis | -1 | 5761 | 6666 |
| YP_006546315.1 | NC_018264_p46 | hypothetical protein | phrog_210 | unknown function | unknown function | -1 | 34755 | 35498 |
| YP_006546270.1 | NC_018264_p1 | CopG-like domain-containing protein DNA-binding protein | singleton | unknown function | unknown function | -1 | 86 | 433 |
| YP_006546296.1 | NC_018264_p27 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 18589 | 19026 |
| YP_006546283.1 | NC_018264_p14 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7582 | 7836 |
| YP_006546281.1 | NC_018264_p12 | hypothetical protein | phrog_8048 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 6784 | 7275 |
| YP_006546299.1 | NC_018264_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20073 | 20285 |
| YP_006546297.1 | NC_018264_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19027 | 19833 |
| YP_006546312.1 | NC_018264_p43 | protein of unknown function DUF927 | phrog_8841 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 31169 | 33661 |
| YP_006546295.1 | NC_018264_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18154 | 18588 |
| YP_006546304.1 | NC_018264_p35 | hypothetical protein | phrog_2538 | terminase small subunit | head and packaging | -1 | 27517 | 27906 |
| YP_006546317.1 | NC_018264_p48 | hypothetical protein | phrog_2378 | unknown function | unknown function | -1 | 35875 | 36276 |
| YP_006546311.1 | NC_018264_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30321 | 30803 |
| YP_006546298.1 | NC_018264_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19844 | 20083 |
| YP_006546323.1 | NC_018264_p54 | helix-turn-helix domain protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 39022 | 39279 |