| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018269 |
Definition |
Marinomonas phage P12026, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
31766 |
Host Name |
Marinomonas |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
46.6 |
Number of singletons |
24 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006560242.1 | NC_018269_p4 | phage portal protein, HK97 family | phrog_12 | portal protein | head and packaging | 1 | 1966 | 3270 |
| YP_006560247.1 | NC_018269_p9 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 6470 | 7051 |
| YP_006560241.1 | NC_018269_p3 | hypothetical protein | phrog_36059 | unknown function | unknown function | 1 | 1815 | 1979 |
| YP_006560251.1 | NC_018269_p13 | phage major tail protein | singleton | major tail protein | tail | 1 | 8270 | 8653 |
| YP_006560285.1 | NC_018269_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27942 | 28196 |
| YP_006560240.1 | NC_018269_p2 | phage terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 580 | 1812 |
| YP_006560274.1 | NC_018269_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22270 | 22440 |
| YP_006560290.1 | NC_018269_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30877 | 31194 |
| YP_006560278.1 | NC_018269_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25390 | 25599 |
| YP_006560267.1 | NC_018269_p29 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | -1 | 18400 | 18939 |
| YP_006560287.1 | NC_018269_p49 | RecT protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 28664 | 29602 |
| YP_006560282.1 | NC_018269_p44 | hypothetical protein | phrog_2201 | unknown function | unknown function | 1 | 27093 | 27305 |
| YP_006560262.1 | NC_018269_p24 | hypothetical protein | phrog_9646 | unknown function | unknown function | 1 | 16783 | 17157 |
| YP_006560292.1 | NC_018269_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31451 | 31756 |
| YP_006560260.1 | NC_018269_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16227 | 16391 |
| YP_006560270.1 | NC_018269_p32 | DNA modification methylase | phrog_6263 | DNA methyltransferase | other | 1 | 19983 | 21542 |
| YP_006560265.1 | NC_018269_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 17938 | 18096 |
| YP_006560254.1 | NC_018269_p16 | hypothetical protein | phrog_9483 | tail length tape measure protein | tail | 1 | 9241 | 11160 |
| YP_006560259.1 | NC_018269_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15886 | 16230 |
| YP_006560280.1 | NC_018269_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25822 | 26376 |
| YP_006560253.1 | NC_018269_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9114 | 9248 |
| YP_006560272.1 | NC_018269_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21845 | 22015 |
| YP_006560245.1 | NC_018269_p7 | phage major capsid protein, HK97 family | phrog_10 | major head protein | head and packaging | 1 | 4834 | 6147 |
| YP_006560269.1 | NC_018269_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19391 | 19918 |
| YP_006560261.1 | NC_018269_p23 | N-acetylmuramoyl-L-alanine amidase | phrog_822 | amidase | lysis | 1 | 16388 | 16783 |
| YP_006560248.1 | NC_018269_p10 | phage head-tail adaptor | phrog_25 | head closure Hc1 | connector | 1 | 7051 | 7389 |
| YP_006560281.1 | NC_018269_p43 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 26528 | 27082 |
| YP_006560279.1 | NC_018269_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25596 | 25811 |
| YP_006560264.1 | NC_018269_p26 | hypothetical protein | phrog_1770 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 17498 | 17941 |
| YP_006560284.1 | NC_018269_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27487 | 27792 |
| YP_006560275.1 | NC_018269_p37 | hypothetical protein | phrog_16167 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 22440 | 23297 |
| YP_006560266.1 | NC_018269_p28 | hypothetical protein | phrog_536 | transcriptional regulator | transcription regulation | -1 | 18093 | 18407 |
| YP_006560268.1 | NC_018269_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18959 | 19168 |
| YP_006560291.1 | NC_018269_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31184 | 31324 |
| YP_006560263.1 | NC_018269_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 17170 | 17472 |
| YP_006560239.1 | NC_018269_p1 | phage terminase, small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 95 | 583 |
| YP_006560286.1 | NC_018269_p48 | hypothetical protein | phrog_409 | transcriptional regulator | transcription regulation | -1 | 28187 | 28570 |
| YP_006560246.1 | NC_018269_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6270 | 6470 |
| YP_006560271.1 | NC_018269_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21684 | 21845 |
| YP_006560276.1 | NC_018269_p38 | hypothetical protein | phrog_109 | P-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 23290 | 24030 |
| YP_006560288.1 | NC_018269_p50 | phage exonuclease | phrog_149 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29586 | 30281 |
| YP_006560289.1 | NC_018269_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30520 | 30876 |
| YP_006560252.1 | NC_018269_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8680 | 9072 |
| YP_006560257.1 | NC_018269_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13757 | 14206 |
| YP_006560256.1 | NC_018269_p18 | hypothetical protein | phrog_11439 | tail fiber protein | tail | 1 | 11954 | 13753 |
| YP_006560249.1 | NC_018269_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7386 | 7832 |
| YP_006560250.1 | NC_018269_p12 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 7829 | 8254 |
| YP_006560243.1 | NC_018269_p5 | hypothetical protein | phrog_2468 | head morphogenesis | head and packaging | 1 | 3254 | 4015 |
| YP_006560283.1 | NC_018269_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27302 | 27490 |
| YP_006560244.1 | NC_018269_p6 | phage prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 4151 | 4837 |
| YP_006560277.1 | NC_018269_p39 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 24030 | 25379 |
| YP_006560258.1 | NC_018269_p20 | hypothetical protein | phrog_11262 | tail protein | tail | 1 | 14218 | 15702 |
| YP_006560273.1 | NC_018269_p35 | hypothetical protein | phrog_409 | transcriptional regulator | transcription regulation | 1 | 22012 | 22179 |
| YP_006560255.1 | NC_018269_p17 | hypothetical protein | phrog_11633 | unknown function | unknown function | 1 | 11160 | 11957 |