Genomic map of Weissella phage phiYS61 (NC_018270)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018270
Definition
Weissella phage phiYS61, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
33594
Host Name
Weissella cibaria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
43.91
Number of singletons
35
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006560311.1 NC_018270_p19 N-acetyl-L-alanine amidase phrog_1110 endolysin lysis 1 12513 13400
YP_006560315.1 NC_018270_p23 upper collar connector phrog_2038 upper collar connector connector 1 18052 19422
YP_006560334.1 NC_018270_p42 hypothetical protein singleton unknown function unknown function -1 29998 30321
YP_006560299.1 NC_018270_p7 NMN transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 5330 6061
YP_006560307.1 NC_018270_p15 hypothetical protein singleton unknown function unknown function 1 10680 10931
YP_006560326.1 NC_018270_p34 hypothetical protein singleton unknown function unknown function -1 26516 26689
YP_006560305.1 NC_018270_p13 major capsid protein phrog_2006 major head protein head and packaging 1 8383 9618
YP_006560297.1 NC_018270_p5 DNA encapsidation protein phrog_2150 terminase head and packaging 1 3994 5082
YP_006560308.1 NC_018270_p16 hypothetical protein singleton unknown function unknown function 1 10975 11172
YP_006560317.1 NC_018270_p25 tail fiber protein singleton unknown function unknown function 1 20396 21760
YP_006560340.1 NC_018270_p48 hypothetical protein singleton unknown function unknown function -1 32233 32577
YP_006560320.1 NC_018270_p28 phage holin phrog_199 holin lysis 1 24328 24681
YP_006560337.1 NC_018270_p45 hypothetical protein singleton unknown function unknown function -1 31125 31334
YP_006560332.1 NC_018270_p40 hypothetical protein singleton unknown function unknown function -1 29091 29186
YP_006560325.1 NC_018270_p33 hypothetical protein singleton unknown function unknown function -1 26263 26526
YP_006560321.1 NC_018270_p29 hypothetical protein singleton unknown function unknown function -1 24800 25087
YP_006560313.1 NC_018270_p21 tail lysin phrog_11037 unknown function unknown function -1 14126 15472
YP_006560304.1 NC_018270_p12 major capsid protein with bacterial immunoglobulin-like domain phrog_2006 major head protein head and packaging 1 8383 9881
YP_006560335.1 NC_018270_p43 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 30504 30986
YP_006560322.1 NC_018270_p30 hypothetical protein singleton unknown function unknown function -1 25059 25550
YP_006560327.1 NC_018270_p35 hypothetical protein singleton unknown function unknown function -1 26823 26933
YP_006560303.1 NC_018270_p11 hypothetical protein singleton unknown function unknown function 1 7811 8200
YP_006560309.1 NC_018270_p17 hypothetical protein singleton unknown function unknown function 1 11208 11768
YP_006560329.1 NC_018270_p37 hypothetical protein singleton unknown function unknown function -1 27201 27518
YP_006560306.1 NC_018270_p14 hypothetical protein singleton unknown function unknown function 1 10160 10669
YP_006560302.1 NC_018270_p10 hypothetical protein singleton unknown function unknown function 1 7447 7821
YP_006560323.1 NC_018270_p31 hypothetical protein phrog_774 unknown function unknown function -1 25581 25820
YP_006560331.1 NC_018270_p39 hypothetical protein phrog_4897 kinase other -1 28493 29017
YP_006560295.1 NC_018270_p3 terminal protein singleton unknown function unknown function 1 1032 1817
YP_006560294.1 NC_018270_p2 hypothetical protein singleton unknown function unknown function 1 287 1048
YP_006560293.1 NC_018270_p1 hypothetical protein singleton unknown function unknown function 1 129 257
YP_006560312.1 NC_018270_p20 hypothetical protein singleton unknown function unknown function 1 13440 13967
YP_006560319.1 NC_018270_p27 structural protein singleton unknown function unknown function 1 22333 24312
YP_006560318.1 NC_018270_p26 hypothetical protein singleton unknown function unknown function 1 21812 22120
YP_006560336.1 NC_018270_p44 hypothetical protein singleton unknown function unknown function -1 30983 31102
YP_006560328.1 NC_018270_p36 hypothetical protein singleton unknown function unknown function -1 26933 27208
YP_006560296.1 NC_018270_p4 protein primed DNA polymerase singleton unknown function unknown function 1 1829 3904
YP_006560324.1 NC_018270_p32 hypothetical protein singleton unknown function unknown function -1 25824 26291
YP_006560316.1 NC_018270_p24 lower collar protein phrog_5472 lower collar tail 1 19422 20330
YP_006560339.1 NC_018270_p47 hypothetical protein singleton unknown function unknown function -1 31887 32144
YP_006560333.1 NC_018270_p41 hypothetical protein singleton unknown function unknown function -1 29300 29998
YP_006560300.1 NC_018270_p8 hypothetical protein singleton unknown function unknown function 1 6393 6854
YP_006560301.1 NC_018270_p9 structural protein singleton unknown function unknown function 1 6960 7304
YP_006560314.1 NC_018270_p22 tail protein phrog_2248 tail protein tail 1 15535 17730
YP_006560298.1 NC_018270_p6 hypothetical protein singleton unknown function unknown function 1 5113 5214
YP_006560338.1 NC_018270_p46 hypothetical protein singleton unknown function unknown function -1 31487 31648
YP_006560310.1 NC_018270_p18 hypothetical protein singleton unknown function unknown function 1 11847 12458
YP_006560330.1 NC_018270_p38 hypothetical protein singleton unknown function unknown function -1 27520 28491