Genomic map of Pseudomonas phage MP42 (NC_018274)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018274
Definition
Pseudomonas phage MP42, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
DB of origin
REFSEQ
Length
36847
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
64.19
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006560525.1 NC_018274_p28 phage uncharacterized protein phrog_38 terminase large subunit head and packaging 1 13700 15352
YP_006560510.1 NC_018274_p13 host nuclease inhibitor protein phrog_491 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7562 8080
YP_006560531.1 NC_018274_p34 protease(I) and scaffold(Z) protein phrog_328 head maturation protease head and packaging 1 19595 20566
YP_006560532.1 NC_018274_p35 hypothetical protein phrog_371 major head protein head and packaging 1 20570 21484
YP_006560543.1 NC_018274_p46 hypothetical protein phrog_687 structural protein head and packaging 1 29001 29924
YP_006560523.1 NC_018274_p26 hypothetical protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12668 13168
YP_006560539.1 NC_018274_p42 hypothetical protein phrog_1442 tail assembly chaperone tail 1 23916 24559
YP_006560503.1 NC_018274_p6 A transposase phrog_310 transposase integration and excision 1 2549 4621
YP_006560548.1 NC_018274_p51 hypothetical protein phrog_14458 tail fiber protein tail 1 35095 35940
YP_006560537.1 NC_018274_p40 hypothetical protein phrog_3129 unknown function unknown function 1 22930 23109
YP_006560499.1 NC_018274_p2 Ner-like protein phrog_769 transcriptional repressor transcription regulation 1 1075 1386
YP_006560511.1 NC_018274_p14 hypothetical protein phrog_10427 unknown function unknown function 1 8080 8283
YP_006560509.1 NC_018274_p12 hypothetical protein phrog_2043 unknown function unknown function 1 7261 7545
YP_006560512.1 NC_018274_p15 hypothetical protein phrog_4367 unknown function unknown function 1 8285 8593
YP_006560524.1 NC_018274_p27 hypothetical protein phrog_1244 unknown function unknown function -1 13174 13701
YP_006560550.1 NC_018274_p53 hypothetical protein phrog_2687 unknown function unknown function 1 36239 36457
YP_006560507.1 NC_018274_p10 hypothetical protein phrog_3765 unknown function unknown function 1 6742 6858
YP_006560526.1 NC_018274_p29 portal protein phrog_113 portal protein head and packaging 1 15362 16942
YP_006560508.1 NC_018274_p11 hypothetical protein phrog_2119 unknown function unknown function 1 6858 7271
YP_006560501.1 NC_018274_p4 hypothetical protein phrog_8647 unknown function unknown function 1 1823 2149
YP_006560546.1 NC_018274_p49 hypothetical protein phrog_1196 tail assembly chaperone tail 1 32683 32901
YP_006560533.1 NC_018274_p36 hypothetical protein phrog_4833 unknown function unknown function 1 21551 21892
YP_006560544.1 NC_018274_p47 hypothetical protein phrog_778 tail assembly protein tail 1 31662 32438
YP_006560513.1 NC_018274_p16 hypothetical protein phrog_12417 unknown function unknown function 1 8596 9084
YP_006560527.1 NC_018274_p30 head assembly cofactor phrog_220 minor head protein and DNA pilot head and packaging 1 16942 18228
YP_006560514.1 NC_018274_p17 hypothetical protein phrog_3652 unknown function unknown function 1 9087 9356
YP_006560518.1 NC_018274_p21 hypothetical protein phrog_3648 unknown function unknown function 1 10666 11013
YP_006560521.1 NC_018274_p24 hypothetical protein phrog_2975 Rz-like spanin lysis 1 11960 12361
YP_006560528.1 NC_018274_p31 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 18228 18695
YP_006560500.1 NC_018274_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1389 1823
YP_006560517.1 NC_018274_p20 integral membrane protein phrog_836 late transcriptional activator transcription regulation 1 10114 10563
YP_006560502.1 NC_018274_p5 hypothetical protein phrog_4468 unknown function unknown function 1 2146 2556
YP_006560540.1 NC_018274_p43 hypothetical protein phrog_1442 tail assembly chaperone tail 1 23916 24410
YP_006560504.1 NC_018274_p7 DNA transposition protein phrog_296 DNA transposition protein integration and excision 1 4618 5388
YP_006560522.1 NC_018274_p25 hypothetical protein phrog_1103 unknown function unknown function 1 12472 12660
YP_006560516.1 NC_018274_p19 hypothetical protein phrog_286 unknown function unknown function 1 9720 10127
YP_006560515.1 NC_018274_p18 hypothetical protein phrog_14676 unknown function unknown function 1 9541 9723
YP_006560541.1 NC_018274_p44 tail component protein phrog_2335 tail length tape measure protein tail 1 24559 28035
YP_006560538.1 NC_018274_p41 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 23142 23912
YP_006560549.1 NC_018274_p52 hypothetical protein phrog_2398 unknown function unknown function 1 35940 36242
YP_006560506.1 NC_018274_p9 hypothetical protein phrog_3190 unknown function unknown function 1 6122 6757
YP_006560536.1 NC_018274_p39 hypothetical protein phrog_209 portal protein head and packaging 1 22469 22942
YP_006560535.1 NC_018274_p38 hypothetical protein phrog_195 head-tail adaptor connector 1 22056 22472
YP_006560520.1 NC_018274_p23 structural protein phrog_873 endolysin head and packaging 1 11428 11844
YP_006560498.1 NC_018274_p1 c repressor phrog_4 transcriptional repressor transcription regulation -1 170 796
YP_006560505.1 NC_018274_p8 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 5385 6050
YP_006560529.1 NC_018274_p32 hypothetical protein phrog_20331 unknown function unknown function 1 18848 19042
YP_006560530.1 NC_018274_p33 hypothetical protein phrog_18309 unknown function unknown function 1 19149 19253
YP_006560542.1 NC_018274_p45 hypothetical protein phrog_687 structural protein head and packaging 1 28043 28999
YP_006560547.1 NC_018274_p50 hypothetical protein phrog_1101 tail protein tail 1 32891 35098
YP_006560534.1 NC_018274_p37 hypothetical protein phrog_3376 unknown function unknown function 1 21892 22059
YP_006560545.1 NC_018274_p48 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32447 32686
YP_006560519.1 NC_018274_p22 hypothetical protein phrog_1024 unknown function unknown function 1 10958 11428