Genomic map of Croceibacter phage P2559S (NC_018276)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018276
Definition
Croceibacter phage P2559S, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
44988
Host Name
Croceibacter atlanticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
68
%GC
41.85
Number of singletons
32
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006560667.1 NC_018276_p47 hypothetical protein singleton unknown function unknown function 1 33183 33896
YP_006560687.1 NC_018276_p67 S-adenosylmethionine decarboxylase phrog_27309 S-adenosylmethionine decarboxylase other 1 43987 44307
YP_006560686.1 NC_018276_p66 hypothetical protein phrog_498 DNA methyltransferase other 1 42666 44024
YP_006560626.1 NC_018276_p6 hypothetical protein phrog_1499 unknown function unknown function 1 3533 4909
YP_006560630.1 NC_018276_p10 hypothetical protein singleton unknown function unknown function 1 6364 6585
YP_006560623.1 NC_018276_p3 hypothetical protein singleton unknown function unknown function 1 1749 1976
YP_006560636.1 NC_018276_p16 hypothetical protein phrog_17560 unknown function unknown function 1 12432 12935
YP_006560683.1 NC_018276_p63 hypothetical protein phrog_5845 unknown function unknown function 1 40786 41400
YP_006560639.1 NC_018276_p19 hypothetical protein singleton unknown function unknown function 1 14092 14352
YP_006560637.1 NC_018276_p17 hypothetical protein phrog_6195 tail protein tail 1 13012 13530
YP_006560662.1 NC_018276_p42 hypothetical protein singleton unknown function unknown function 1 31161 31280
YP_006560677.1 NC_018276_p57 hypothetical protein phrog_23774 unknown function unknown function 1 37906 38352
YP_006560668.1 NC_018276_p48 hypothetical protein singleton unknown function unknown function 1 33955 34194
YP_006560650.1 NC_018276_p30 hypothetical protein singleton unknown function unknown function 1 27826 28065
YP_006560669.1 NC_018276_p49 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 34187 34960
YP_006560679.1 NC_018276_p59 hypothetical protein singleton unknown function unknown function 1 38582 39235
YP_006560638.1 NC_018276_p18 hypothetical protein phrog_8145 unknown function unknown function 1 13527 14090
YP_006560684.1 NC_018276_p64 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 41397 41852
YP_006560664.1 NC_018276_p44 hypothetical protein singleton unknown function unknown function 1 32353 32583
YP_006560674.1 NC_018276_p54 hypothetical protein singleton unknown function unknown function 1 37166 37360
YP_006560673.1 NC_018276_p53 hypothetical protein singleton unknown function unknown function 1 36966 37163
YP_006560681.1 NC_018276_p61 DNA polymerase III epsilon subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 39670 40410
YP_006560629.1 NC_018276_p9 tail protein phrog_8193 major head protein head and packaging 1 5723 6364
YP_006560675.1 NC_018276_p55 hypothetical protein singleton unknown function unknown function 1 37410 37748
YP_006560652.1 NC_018276_p32 hypothetical protein singleton unknown function unknown function 1 28519 28647
YP_006560657.1 NC_018276_p37 hypothetical protein singleton unknown function unknown function 1 29892 30056
YP_006560627.1 NC_018276_p7 hypothetical protein phrog_6539 unknown function unknown function 1 4961 5425
YP_006560624.1 NC_018276_p4 hypothetical protein phrog_1362 unknown function unknown function 1 2018 3106
YP_006560672.1 NC_018276_p52 hypothetical protein phrog_11619 DNA methyltransferase other 1 36449 36946
YP_006560654.1 NC_018276_p34 hypothetical protein singleton unknown function unknown function 1 29131 29478
YP_006560670.1 NC_018276_p50 hypothetical protein singleton unknown function unknown function 1 34973 35887
YP_006560645.1 NC_018276_p25 hypothetical protein phrog_36068 unknown function unknown function 1 22213 25986
YP_006560661.1 NC_018276_p41 hypothetical protein singleton unknown function unknown function 1 30785 31141
YP_006560642.1 NC_018276_p22 phage tail length tape-measure protein phrog_20660 tail length tape measure protein tail 1 15175 18798
YP_006560688.1 NC_018276_p68 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 44321 44920
YP_006560678.1 NC_018276_p58 hypothetical protein singleton unknown function unknown function 1 38352 38570
YP_006560656.1 NC_018276_p36 hypothetical protein singleton unknown function unknown function 1 29776 29895
YP_006560628.1 NC_018276_p8 hypothetical protein phrog_29145 unknown function unknown function 1 5382 5606
YP_006560685.1 NC_018276_p65 hypothetical protein phrog_3193 unknown function unknown function 1 41855 42634
YP_006560644.1 NC_018276_p24 hypothetical protein phrog_35885 unknown function unknown function 1 21338 22198
YP_006560655.1 NC_018276_p35 hypothetical protein phrog_5443 unknown function unknown function 1 29478 29792
YP_006560653.1 NC_018276_p33 ribonuclease H phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 28638 29114
YP_006560625.1 NC_018276_p5 hypothetical protein singleton unknown function unknown function 1 3154 3528
YP_006560622.1 NC_018276_p2 hypothetical protein singleton unknown function unknown function 1 1516 1749
YP_006560634.1 NC_018276_p14 hypothetical protein phrog_8189 unknown function unknown function 1 10834 12114
YP_006560660.1 NC_018276_p40 hypothetical protein phrog_35839 unknown function unknown function 1 30691 30825
YP_006560635.1 NC_018276_p15 hypothetical protein singleton unknown function unknown function 1 12124 12408
YP_006560633.1 NC_018276_p13 phage capsid protein phrog_7231 virion structural protein head and packaging 1 9737 10765
YP_006560648.1 NC_018276_p28 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis 1 26760 27296
YP_006560640.1 NC_018276_p20 hypothetical protein singleton unknown function unknown function 1 14349 14765
YP_006560651.1 NC_018276_p31 hypothetical protein phrog_32997 unknown function unknown function 1 28271 28519
YP_006560680.1 NC_018276_p60 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39236 39673
YP_006560646.1 NC_018276_p26 hypothetical protein singleton unknown function unknown function 1 26007 26330
YP_006560647.1 NC_018276_p27 hypothetical protein singleton unknown function unknown function 1 26308 26763
YP_006560671.1 NC_018276_p51 hypothetical protein phrog_1770 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35896 36435
YP_006560659.1 NC_018276_p39 hypothetical protein singleton unknown function unknown function 1 30245 30505
YP_006560658.1 NC_018276_p38 hypothetical protein singleton unknown function unknown function 1 30057 30242
YP_006560631.1 NC_018276_p11 phage capsid protein phrog_7376 portal protein head and packaging 1 6635 8275
YP_006560676.1 NC_018276_p56 hypothetical protein singleton unknown function unknown function 1 37745 37909
YP_006560643.1 NC_018276_p23 hypothetical protein phrog_19383 unknown function unknown function 1 18798 21338
YP_006560632.1 NC_018276_p12 hypothetical protein phrog_7970 virion structural protein head and packaging 1 8714 9655
YP_006560665.1 NC_018276_p45 hypothetical protein singleton unknown function unknown function 1 32574 32885
YP_006560682.1 NC_018276_p62 hypothetical protein singleton unknown function unknown function 1 40403 40789
YP_006560666.1 NC_018276_p46 hypothetical protein phrog_1273 unknown function unknown function 1 32887 33180
YP_006560621.1 NC_018276_p1 terminase-like family protein phrog_38 terminase large subunit head and packaging 1 119 1438
YP_006560641.1 NC_018276_p21 hypothetical protein singleton unknown function unknown function 1 14842 15114
YP_006560649.1 NC_018276_p29 hypothetical protein singleton unknown function unknown function 1 27300 27674
YP_006560663.1 NC_018276_p43 hypothetical protein phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 31283 32353