| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018278 |
Definition |
Burkholderia phage KL1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kilunavirus. |
DB of origin |
REFSEQ |
Length |
42832 |
Host Name |
Burkholderia cenocepacia |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
54.6 |
Number of singletons |
6 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006560771.1 | NC_018278_p20 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 12792 | 13226 |
| YP_006560763.1 | NC_018278_p12 | hypothetical protein | phrog_9062 | unknown function | unknown function | 1 | 8171 | 8587 |
| YP_006560803.1 | NC_018278_p52 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 40930 | 41415 |
| YP_006560760.1 | NC_018278_p9 | head morphogenesis protein | phrog_241 | head morphogenesis | head and packaging | 1 | 5269 | 6384 |
| YP_006560774.1 | NC_018278_p23 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 18070 | 19179 |
| YP_006560773.1 | NC_018278_p22 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 17069 | 18067 |
| YP_006560799.1 | NC_018278_p48 | hypothetical protein | phrog_18992 | unknown function | unknown function | 1 | 39882 | 40154 |
| YP_006560754.1 | NC_018278_p3 | lysozyme | phrog_315 | endolysin | lysis | 1 | 514 | 1080 |
| YP_006560757.1 | NC_018278_p6 | hypothetical protein | phrog_5334 | terminase small subunit | head and packaging | 1 | 1647 | 2138 |
| YP_006560775.1 | NC_018278_p24 | hypothetical protein | phrog_1082 | tail assembly protein | tail | 1 | 19179 | 20870 |
| YP_006560788.1 | NC_018278_p37 | primase | phrog_3022 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 33924 | 36233 |
| YP_006560792.1 | NC_018278_p41 | hypothetical protein | phrog_10287 | unknown function | unknown function | 1 | 37728 | 38024 |
| YP_006560794.1 | NC_018278_p43 | hypothetical protein | phrog_11401 | unknown function | unknown function | 1 | 38302 | 38703 |
| YP_006560772.1 | NC_018278_p21 | tail tape measure | phrog_3336 | tail length tape measure protein | tail | 1 | 13232 | 17050 |
| YP_006560785.1 | NC_018278_p34 | hypothetical protein | phrog_2480 | unknown function | unknown function | -1 | 32471 | 32980 |
| YP_006560797.1 | NC_018278_p46 | hypothetical protein | phrog_8564 | unknown function | unknown function | 1 | 39455 | 39655 |
| YP_006560793.1 | NC_018278_p42 | hypothetical protein | phrog_10560 | unknown function | unknown function | 1 | 38060 | 38296 |
| YP_006560761.1 | NC_018278_p10 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 6403 | 7110 |
| YP_006560783.1 | NC_018278_p32 | hypothetical protein | phrog_6015 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30852 | 31637 |
| YP_006560766.1 | NC_018278_p15 | head-tail joining protein | phrog_161 | head closure Hc1 | connector | 1 | 9570 | 9944 |
| YP_006560755.1 | NC_018278_p4 | Rz | phrog_1026 | Rz-like spanin | lysis | 1 | 1091 | 1408 |
| YP_006560801.1 | NC_018278_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40374 | 40550 |
| YP_006560781.1 | NC_018278_p30 | superfamily II helicase/restriction enzyme | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 27696 | 29351 |
| YP_006560784.1 | NC_018278_p33 | recombinase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 31696 | 32412 |
| YP_006560798.1 | NC_018278_p47 | hypothetical protein | phrog_13844 | unknown function | unknown function | 1 | 39652 | 39840 |
| YP_006560768.1 | NC_018278_p17 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 10412 | 11965 |
| YP_006560790.1 | NC_018278_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36735 | 37091 |
| YP_006560777.1 | NC_018278_p26 | tail protein | phrog_1101 | tail protein | tail | 1 | 21689 | 24100 |
| YP_006560767.1 | NC_018278_p16 | minor tail protein | phrog_179 | tail terminator | connector | 1 | 9941 | 10399 |
| YP_006560752.1 | NC_018278_p1 | hypothetical protein | phrog_462 | lipoprotein | other | 1 | 1 | 267 |
| YP_006560762.1 | NC_018278_p11 | major capsid protein | phrog_247 | major head protein | head and packaging | 1 | 7123 | 8097 |
| YP_006560764.1 | NC_018278_p13 | hypothetical protein | phrog_10405 | virion structural protein | head and packaging | 1 | 8656 | 9033 |
| YP_006560780.1 | NC_018278_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27323 | 27691 |
| YP_006560805.1 | NC_018278_p54 | hypothetical protein | phrog_6168 | unknown function | unknown function | 1 | 41826 | 42032 |
| YP_006560782.1 | NC_018278_p31 | exonuclease | phrog_1990 | Cas4-domain exonuclease | DNA, RNA and nucleotide metabolism | -1 | 29344 | 30342 |
| YP_006560786.1 | NC_018278_p35 | pyrophosphatase | phrog_229 | MazG-like pyrophosphatase | other | -1 | 33059 | 33598 |
| YP_006560787.1 | NC_018278_p36 | transcriptional regulator | phrog_13059 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 33746 | 33934 |
| YP_006560800.1 | NC_018278_p49 | hypothetical protein | phrog_9844 | unknown function | unknown function | 1 | 40138 | 40374 |
| YP_006560776.1 | NC_018278_p25 | hypothetical protein | phrog_778 | tail assembly protein | tail | 1 | 20867 | 21688 |
| YP_006560759.1 | NC_018278_p8 | portal protein | phrog_145 | portal protein | head and packaging | 1 | 3770 | 5266 |
| YP_006560779.1 | NC_018278_p28 | DNA polymerase III beta subunit | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 26179 | 27339 |
| YP_006560791.1 | NC_018278_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37097 | 37360 |
| YP_006560778.1 | NC_018278_p27 | DNA polymerase | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 24097 | 26166 |
| YP_006560753.1 | NC_018278_p2 | holin | phrog_1356 | holin | lysis | 1 | 264 | 560 |
| YP_006560756.1 | NC_018278_p5 | Rz1 | phrog_1275 | Rz-like spanin | lysis | 1 | 1329 | 1592 |
| YP_006560765.1 | NC_018278_p14 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 9047 | 9565 |
| YP_006560796.1 | NC_018278_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39201 | 39458 |
| YP_006560804.1 | NC_018278_p53 | hypothetical protein | phrog_9241 | unknown function | unknown function | 1 | 41412 | 41786 |
| YP_006560789.1 | NC_018278_p38 | hypothetical protein | phrog_3633 | unknown function | unknown function | 1 | 36366 | 36668 |
| YP_006560770.1 | NC_018278_p19 | tail protein | phrog_313 | Tail assembly chaperone | tail | 1 | 12030 | 12458 |
| YP_006560758.1 | NC_018278_p7 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 2116 | 3756 |
| YP_006560769.1 | NC_018278_p18 | tail protein | phrog_8233 | tail assembly chaperone | tail | 1 | 12030 | 12823 |
| YP_006560795.1 | NC_018278_p44 | Vsr endonuclease | phrog_824 | unknown function | unknown function | 1 | 38707 | 39195 |
| YP_006560806.1 | NC_018278_p55 | hypothetical protein | phrog_7597 | unknown function | unknown function | 1 | 42120 | 42674 |
| YP_006560802.1 | NC_018278_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40562 | 40933 |