| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018282 |
Definition |
Pseudomonas phage MP1412, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus. |
DB of origin |
REFSEQ |
Length |
61167 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
77 |
%GC |
64.28 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006561065.1 | NC_018282_p58 | hypothetical protein | phrog_6213 | unknown function | unknown function | 1 | 43672 | 44277 |
| YP_006561076.1 | NC_018282_p69 | tail length tape measure protein | phrog_3336 | tail length tape measure protein | tail | 1 | 50237 | 53059 |
| YP_006561068.1 | NC_018282_p61 | holin | phrog_8226 | holin | lysis | 1 | 45045 | 45380 |
| YP_006561055.1 | NC_018282_p48 | hypothetical protein | phrog_11606 | unknown function | unknown function | 1 | 34321 | 34509 |
| YP_006561041.1 | NC_018282_p34 | hypothetical protein | phrog_13330 | unknown function | unknown function | 1 | 26505 | 26834 |
| YP_006561017.1 | NC_018282_p10 | hypothetical protein | phrog_6364 | unknown function | unknown function | 1 | 8776 | 9651 |
| YP_006561048.1 | NC_018282_p41 | exonuclease | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29462 | 30034 |
| YP_006561015.1 | NC_018282_p8 | hypothetical protein | phrog_7790 | unknown function | unknown function | 1 | 7809 | 8492 |
| YP_006561012.1 | NC_018282_p5 | hypothetical protein | phrog_2402 | unknown function | unknown function | 1 | 3643 | 4482 |
| YP_006561081.1 | NC_018282_p74 | tail assembly structural protein | phrog_1180 | tail assembly chaperone | tail | 1 | 58091 | 58324 |
| YP_006561010.1 | NC_018282_p3 | hypothetical protein | phrog_5888 | unknown function | unknown function | 1 | 2542 | 2895 |
| YP_006561034.1 | NC_018282_p27 | hypothetical protein | phrog_2053 | unknown function | unknown function | 1 | 22846 | 23061 |
| YP_006561059.1 | NC_018282_p52 | structural protein | phrog_145 | portal protein | head and packaging | 1 | 37565 | 39097 |
| YP_006561070.1 | NC_018282_p63 | structural protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 46090 | 46608 |
| YP_006561073.1 | NC_018282_p66 | major structural protein | phrog_290 | minor tail protein | tail | 1 | 47463 | 48995 |
| YP_006561054.1 | NC_018282_p47 | hypothetical protein | phrog_21134 | unknown function | unknown function | 1 | 33926 | 34324 |
| YP_006561079.1 | NC_018282_p72 | tail assembly structural protein | phrog_1082 | tail assembly protein | tail | 1 | 55598 | 57271 |
| YP_006561047.1 | NC_018282_p40 | hypothetical protein | phrog_5016 | unknown function | unknown function | 1 | 29179 | 29460 |
| YP_006561075.1 | NC_018282_p68 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 49788 | 50234 |
| YP_006561019.1 | NC_018282_p12 | DNA repair photolyase | phrog_9252 | DNA repair photolyase | DNA, RNA and nucleotide metabolism | 1 | 10559 | 12001 |
| YP_006561008.1 | NC_018282_p1 | hypothetical protein | phrog_6420 | unknown function | unknown function | 1 | 68 | 412 |
| YP_006561043.1 | NC_018282_p36 | hypothetical protein | phrog_9341 | unknown function | unknown function | 1 | 27151 | 27438 |
| YP_006561051.1 | NC_018282_p44 | antirestriction protein | phrog_10132 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | 1 | 31515 | 31943 |
| YP_006561082.1 | NC_018282_p75 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 58321 | 58527 |
| YP_006561022.1 | NC_018282_p15 | hypothetical protein | phrog_1965 | unknown function | unknown function | 1 | 13676 | 14236 |
| YP_006561014.1 | NC_018282_p7 | ribonucleotide reductase | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 5919 | 7664 |
| YP_006561029.1 | NC_018282_p22 | deoxycytidylate deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 18753 | 19214 |
| YP_006561049.1 | NC_018282_p42 | hypothetical protein | phrog_8776 | unknown function | unknown function | 1 | 30307 | 30927 |
| YP_006561021.1 | NC_018282_p14 | hypothetical protein | phrog_2396 | unknown function | unknown function | 1 | 12631 | 13620 |
| YP_006561009.1 | NC_018282_p2 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 840 | 2534 |
| YP_006561078.1 | NC_018282_p71 | structural protein | phrog_687 | structural protein | head and packaging | 1 | 54592 | 55596 |
| YP_006561084.1 | NC_018282_p77 | structural protein | phrog_5363 | unknown function | unknown function | 1 | 60682 | 61167 |
| YP_006561016.1 | NC_018282_p9 | hypothetical protein | phrog_4445 | unknown function | unknown function | 1 | 8503 | 8766 |
| YP_006561052.1 | NC_018282_p45 | hypothetical protein | phrog_10108 | unknown function | unknown function | 1 | 32001 | 32342 |
| YP_006561039.1 | NC_018282_p32 | hypothetical protein | phrog_9147 | unknown function | unknown function | 1 | 25430 | 26035 |
| YP_006561032.1 | NC_018282_p25 | endonuclease | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 19870 | 20421 |
| YP_006561042.1 | NC_018282_p35 | hypothetical protein | phrog_8020 | unknown function | unknown function | 1 | 26852 | 27148 |
| YP_006561040.1 | NC_018282_p33 | hypothetical protein | phrog_7569 | unknown function | unknown function | 1 | 26032 | 26508 |
| YP_006561056.1 | NC_018282_p49 | hypothetical protein | phrog_6858 | unknown function | unknown function | 1 | 34513 | 34764 |
| YP_006561057.1 | NC_018282_p50 | hypothetical protein | phrog_4044 | terminase small subunit | head and packaging | 1 | 35433 | 35960 |
| YP_006561030.1 | NC_018282_p23 | hypothetical protein | phrog_2165 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 19222 | 19605 |
| YP_006561074.1 | NC_018282_p67 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 49056 | 49514 |
| YP_006561013.1 | NC_018282_p6 | exonuclease | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 4584 | 5777 |
| YP_006561037.1 | NC_018282_p30 | hypothetical protein | phrog_9297 | unknown function | unknown function | 1 | 24749 | 25090 |
| YP_006561064.1 | NC_018282_p57 | structural protein | phrog_15312 | virion structural protein | head and packaging | 1 | 43152 | 43652 |
| YP_006561036.1 | NC_018282_p29 | hypothetical protein | phrog_8203 | unknown function | unknown function | 1 | 23574 | 24752 |
| YP_006561024.1 | NC_018282_p17 | hypothetical protein | phrog_6047 | unknown function | unknown function | 1 | 15298 | 15894 |
| YP_006561027.1 | NC_018282_p20 | polymerase A | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 16451 | 18445 |
| YP_006561033.1 | NC_018282_p26 | integrase | phrog_1829 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 20424 | 22835 |
| YP_006561062.1 | NC_018282_p55 | structural protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 41064 | 41846 |
| YP_006561066.1 | NC_018282_p59 | structural protein | phrog_8884 | unknown function | unknown function | 1 | 44305 | 44475 |
| YP_006561083.1 | NC_018282_p76 | tail assembly structural protein | phrog_1101 | tail protein | tail | 1 | 58610 | 60682 |
| YP_006561063.1 | NC_018282_p56 | major structural protein | phrog_212 | major head protein | head and packaging | 1 | 42042 | 42974 |
| YP_006561060.1 | NC_018282_p53 | hypothetical protein | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39213 | 39800 |
| YP_006561026.1 | NC_018282_p19 | hypothetical protein | phrog_5839 | unknown function | unknown function | 1 | 16086 | 16451 |
| YP_006561044.1 | NC_018282_p37 | hypothetical protein | phrog_9190 | unknown function | unknown function | 1 | 27443 | 27712 |
| YP_006561067.1 | NC_018282_p60 | Rz protein | phrog_1327 | Rz-like spanin | lysis | 1 | 44479 | 45048 |
| YP_006561025.1 | NC_018282_p18 | hypothetical protein | phrog_14034 | unknown function | unknown function | 1 | 15869 | 16096 |
| YP_006561023.1 | NC_018282_p16 | thymidylate synthase/deoxyuridylate hydroxymethyltransferase | phrog_5131 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 14250 | 15305 |
| YP_006561045.1 | NC_018282_p38 | hypothetical protein | phrog_17285 | unknown function | unknown function | 1 | 27709 | 27873 |
| YP_006561038.1 | NC_018282_p31 | hypothetical protein | phrog_8938 | unknown function | unknown function | 1 | 25158 | 25427 |
| YP_006561077.1 | NC_018282_p70 | tail fiber structural protein | phrog_687 | structural protein | head and packaging | 1 | 53069 | 54580 |
| YP_006561046.1 | NC_018282_p39 | hypothetical protein | phrog_4301 | unknown function | unknown function | 1 | 27852 | 28469 |
| YP_006561053.1 | NC_018282_p46 | hypothetical protein | phrog_10079 | unknown function | unknown function | 1 | 32378 | 33562 |
| YP_006561011.1 | NC_018282_p4 | hypothetical protein | phrog_2378 | unknown function | unknown function | 1 | 2955 | 3500 |
| YP_006561072.1 | NC_018282_p65 | structural protein | phrog_179 | tail terminator | connector | 1 | 46977 | 47429 |
| YP_006561020.1 | NC_018282_p13 | kinase | phrog_800 | terminase small subunit | head and packaging | 1 | 12056 | 12619 |
| YP_006561018.1 | NC_018282_p11 | threonine dehydratase | phrog_7093 | threonine dehydratase | other | 1 | 9653 | 10489 |
| YP_006561071.1 | NC_018282_p64 | structural protein | phrog_161 | head closure Hc1 | connector | 1 | 46612 | 46980 |
| YP_006561080.1 | NC_018282_p73 | tail assembly structural protein | phrog_778 | tail assembly protein | tail | 1 | 57268 | 58077 |
| YP_006561050.1 | NC_018282_p43 | diguanylate-cyclase GGDEF domain | phrog_5594 | unknown function | unknown function | 1 | 30982 | 31452 |
| YP_006561058.1 | NC_018282_p51 | terminase, large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 35960 | 37507 |
| YP_006561061.1 | NC_018282_p54 | head morphogenesis/minor structural protein | phrog_241 | head morphogenesis | head and packaging | 1 | 39787 | 40995 |
| YP_006561035.1 | NC_018282_p28 | hypothetical protein | phrog_14626 | unknown function | unknown function | 1 | 23172 | 23537 |
| YP_006561031.1 | NC_018282_p24 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 19590 | 19916 |
| YP_006561069.1 | NC_018282_p62 | endolysin | phrog_669 | endolysin | lysis | 1 | 45365 | 46090 |
| YP_006561028.1 | NC_018282_p21 | hypothetical protein | phrog_8389 | unknown function | unknown function | 1 | 18442 | 18756 |