| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018283 |
Definition |
Burkholderia phage AH2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Ahduovirus; Burkholderia virus AH2. |
DB of origin |
REFSEQ |
Length |
58065 |
Host Name |
Burkholderia cenocepacia |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
78 |
%GC |
61.31 |
Number of singletons |
27 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006561150.1 | NC_018283_p66 | head-tail joining protein | phrog_75 | head-tail adaptor Ad1 | connector | -1 | 43736 | 43960 |
| YP_006561132.1 | NC_018283_p48 | tail assembly protein | phrog_1196 | tail assembly chaperone | tail | -1 | 26175 | 26375 |
| YP_006561090.1 | NC_018283_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2728 | 2877 |
| YP_006561156.1 | NC_018283_p72 | resolvase | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 49443 | 49745 |
| YP_006561110.1 | NC_018283_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10720 | 10977 |
| YP_006561151.1 | NC_018283_p67 | terminase large subunit | phrog_15 | terminase large subunit | head and packaging | -1 | 44097 | 46076 |
| YP_006561101.1 | NC_018283_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7012 | 7218 |
| YP_006561086.1 | NC_018283_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1073 | 1423 |
| YP_006561104.1 | NC_018283_p20 | DNA polymerase III B subunit | phrog_3007 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 8499 | 9128 |
| YP_006561135.1 | NC_018283_p51 | tail assembly protein | phrog_1082 | tail assembly protein | tail | -1 | 27415 | 29100 |
| YP_006561160.1 | NC_018283_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54140 | 54538 |
| YP_006561126.1 | NC_018283_p42 | lysozyme | phrog_3108 | unknown function | unknown function | -1 | 20585 | 21091 |
| YP_006561140.1 | NC_018283_p56 | tail protein | phrog_5260 | tail protein | tail | -1 | 36098 | 36538 |
| YP_006561162.1 | NC_018283_p78 | primase-polymerase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 55054 | 57534 |
| YP_006561148.1 | NC_018283_p64 | prohead protease | phrog_53 | head maturation protease | head and packaging | -1 | 40743 | 42071 |
| YP_006561137.1 | NC_018283_p53 | hypothetical protein | phrog_687 | structural protein | head and packaging | -1 | 30160 | 31122 |
| YP_006561134.1 | NC_018283_p50 | tail assembly protein | phrog_778 | tail assembly protein | tail | -1 | 26618 | 27418 |
| YP_006561152.1 | NC_018283_p68 | terminase small subunit | phrog_141 | terminase small subunit | head and packaging | -1 | 46210 | 46803 |
| YP_006561100.1 | NC_018283_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6707 | 7015 |
| YP_006561136.1 | NC_018283_p52 | hypothetical protein | phrog_687 | structural protein | head and packaging | -1 | 29097 | 30158 |
| YP_006561113.1 | NC_018283_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13078 | 13497 |
| YP_006561098.1 | NC_018283_p14 | hypothetical protein | phrog_6647 | unknown function | unknown function | 1 | 6021 | 6302 |
| YP_006561092.1 | NC_018283_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3071 | 3325 |
| YP_006561142.1 | NC_018283_p58 | minor tail protein | phrog_5078 | tail terminator | connector | -1 | 37385 | 37897 |
| YP_006561123.1 | NC_018283_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19462 | 20001 |
| YP_006561105.1 | NC_018283_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9149 | 9343 |
| YP_006561097.1 | NC_018283_p13 | hypothetical protein | phrog_4273 | unknown function | unknown function | -1 | 4846 | 5454 |
| YP_006561088.1 | NC_018283_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1809 | 2024 |
| YP_006561118.1 | NC_018283_p34 | hypothetical protein | phrog_31486 | unknown function | unknown function | -1 | 15038 | 15892 |
| YP_006561094.1 | NC_018283_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3663 | 3911 |
| YP_006561129.1 | NC_018283_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 21807 | 22121 |
| YP_006561141.1 | NC_018283_p57 | hypothetical protein | phrog_807 | major tail protein with Ig-like domain | tail | -1 | 36549 | 37337 |
| YP_006561124.1 | NC_018283_p40 | Rz1 | phrog_1275 | Rz-like spanin | lysis | -1 | 20034 | 20264 |
| YP_006561091.1 | NC_018283_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2874 | 3002 |
| YP_006561130.1 | NC_018283_p46 | tail fiber protein | phrog_10080 | unknown function | unknown function | -1 | 22133 | 23731 |
| YP_006561087.1 | NC_018283_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1501 | 1818 |
| YP_006561099.1 | NC_018283_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6311 | 6550 |
| YP_006561138.1 | NC_018283_p54 | tape measure protein | phrog_2335 | tail length tape measure protein | tail | -1 | 31124 | 35860 |
| YP_006561108.1 | NC_018283_p24 | hypothetical protein | phrog_31589 | unknown function | unknown function | 1 | 9935 | 10171 |
| YP_006561122.1 | NC_018283_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18990 | 19412 |
| YP_006561103.1 | NC_018283_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8123 | 8407 |
| YP_006561085.1 | NC_018283_p1 | hypothetical protein | phrog_2355 | unknown function | unknown function | -1 | 619 | 1035 |
| YP_006561131.1 | NC_018283_p47 | tail assembly protein | phrog_1101 | tail protein | tail | -1 | 23809 | 26178 |
| YP_006561114.1 | NC_018283_p30 | excisionase | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 13574 | 13768 |
| YP_006561144.1 | NC_018283_p60 | hypothetical protein | phrog_4858 | unknown function | unknown function | -1 | 38514 | 38873 |
| YP_006561109.1 | NC_018283_p25 | pyrophosphatase | phrog_5658 | pyrophosphatase | other | 1 | 10256 | 10711 |
| YP_006561127.1 | NC_018283_p43 | holin | phrog_1356 | holin | lysis | -1 | 21088 | 21339 |
| YP_006561102.1 | NC_018283_p18 | hypothetical protein | phrog_4786 | cysteine dioxygenase | other | 1 | 7215 | 8069 |
| YP_006561095.1 | NC_018283_p11 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 3913 | 4314 |
| YP_006561120.1 | NC_018283_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17107 | 17199 |
| YP_006561149.1 | NC_018283_p65 | portal protein | phrog_21 | portal protein | head and packaging | -1 | 42068 | 43591 |
| YP_006561106.1 | NC_018283_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9346 | 9645 |
| YP_006561158.1 | NC_018283_p74 | single-stranded DNA binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 51875 | 52609 |
| YP_006561117.1 | NC_018283_p33 | excinuclease | singleton | unknown function | unknown function | -1 | 14450 | 15025 |
| YP_006561139.1 | NC_018283_p55 | tail protein | phrog_11703 | tail length tape measure protein | tail | -1 | 35853 | 36538 |
| YP_006561116.1 | NC_018283_p32 | Vsr endonuclease | phrog_13076 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 14064 | 14450 |
| YP_006561143.1 | NC_018283_p59 | hypothetical protein | phrog_27 | tail completion or Neck1 protein | connector | -1 | 37897 | 38517 |
| YP_006561125.1 | NC_018283_p41 | Rz | phrog_1026 | Rz-like spanin | lysis | -1 | 20277 | 20588 |
| YP_006561153.1 | NC_018283_p69 | excisionase | singleton | unknown function | unknown function | -1 | 46796 | 46990 |
| YP_006561093.1 | NC_018283_p9 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3322 | 3579 |
| YP_006561157.1 | NC_018283_p73 | DNA polymerase | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 49742 | 51796 |
| YP_006561159.1 | NC_018283_p75 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 52655 | 53995 |
| YP_006561154.1 | NC_018283_p70 | repressor | phrog_2967 | transcriptional regulator | transcription regulation | -1 | 47047 | 47736 |
| YP_006561147.1 | NC_018283_p63 | decorator protein | phrog_49 | head decoration | head and packaging | -1 | 40290 | 40688 |
| YP_006561128.1 | NC_018283_p44 | hypothetical protein | phrog_7686 | Rz-like spanin | lysis | -1 | 21336 | 21665 |
| YP_006561145.1 | NC_018283_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38886 | 39134 |
| YP_006561133.1 | NC_018283_p49 | tail assembly protein | phrog_1180 | tail assembly chaperone | tail | -1 | 26372 | 26608 |
| YP_006561096.1 | NC_018283_p12 | hypothetical protein | phrog_33651 | unknown function | unknown function | -1 | 4320 | 4805 |
| YP_006561115.1 | NC_018283_p31 | excisionase | phrog_1300 | excisionase | integration and excision | 1 | 13768 | 14031 |
| YP_006561111.1 | NC_018283_p27 | hypothetical protein | phrog_13898 | unknown function | unknown function | 1 | 11082 | 12074 |
| YP_006561107.1 | NC_018283_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9642 | 9938 |
| YP_006561155.1 | NC_018283_p71 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 47833 | 49446 |
| YP_006561121.1 | NC_018283_p37 | integrase | phrog_1 | integrase | integration and excision | 1 | 17511 | 18842 |
| YP_006561119.1 | NC_018283_p35 | cytosine methyltransferase | phrog_116 | DNA methyltransferase | other | -1 | 15889 | 17031 |
| YP_006561146.1 | NC_018283_p62 | major capsid protein | phrog_29 | major head protein | head and packaging | -1 | 39205 | 40233 |
| YP_006561112.1 | NC_018283_p28 | transcriptional regulator | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 12101 | 13075 |
| YP_006561161.1 | NC_018283_p77 | Cro | singleton | unknown function | unknown function | 1 | 54718 | 55017 |
| YP_006561089.1 | NC_018283_p5 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2021 | 2578 |