| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018831 |
Definition |
Listeria phage P70, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Homburgvirus. |
DB of origin |
REFSEQ |
Length |
67170 |
Host Name |
Listeria |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
119 |
%GC |
36.45 |
Number of singletons |
6 |
Number of paralogs |
10 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006905890.1 | NC_018831_p25 | hypothetical protein | phrog_18550 | unknown function | unknown function | -1 | 24102 | 24302 |
| YP_006905893.1 | NC_018831_p28 | hypothetical protein | phrog_17662 | unknown function | unknown function | -1 | 25784 | 26437 |
| YP_006905967.1 | NC_018831_p102 | hypothetical protein | phrog_559 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 61319 | 62242 |
| YP_006905964.1 | NC_018831_p99 | hypothetical protein | phrog_21092 | unknown function | unknown function | -1 | 60516 | 60716 |
| YP_006905887.1 | NC_018831_p22 | tail fiber protein | phrog_202 | distal tail protein Dit | tail | 1 | 18614 | 20704 |
| YP_006905866.1 | NC_018831_p1 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 1 | 504 |
| YP_006905889.1 | NC_018831_p24 | hypothetical protein | phrog_17281 | unknown function | unknown function | -1 | 23741 | 24112 |
| YP_006905952.1 | NC_018831_p87 | hypothetical protein | phrog_121 | unknown function | unknown function | -1 | 57320 | 57952 |
| YP_006905969.1 | NC_018831_p104 | hypothetical protein | phrog_681 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 62454 | 62849 |
| YP_006905930.1 | NC_018831_p65 | hypothetical protein | phrog_7296 | unknown function | unknown function | 1 | 47208 | 47717 |
| YP_006905978.1 | NC_018831_p113 | hypothetical protein | phrog_10526 | unknown function | unknown function | -1 | 64813 | 65046 |
| YP_006905896.1 | NC_018831_p31 | hypothetical protein | phrog_18039 | unknown function | unknown function | -1 | 27026 | 27253 |
| YP_006905965.1 | NC_018831_p100 | hypothetical protein | phrog_20263 | unknown function | unknown function | -1 | 60719 | 60916 |
| YP_006905873.1 | NC_018831_p8 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 6892 | 8541 |
| YP_006905888.1 | NC_018831_p23 | tail protein | phrog_17797 | tail protein | tail | 1 | 20716 | 23502 |
| YP_006905982.1 | NC_018831_p117 | hypothetical protein | phrog_10628 | unknown function | unknown function | -1 | 65788 | 66024 |
| YP_006905957.1 | NC_018831_p92 | hypothetical protein | singleton | unknown function | unknown function | -1 | 58907 | 59083 |
| YP_006905876.1 | NC_018831_p11 | major head protein | phrog_544 | major head protein | head and packaging | 1 | 10075 | 10980 |
| YP_006905894.1 | NC_018831_p29 | hypothetical protein | phrog_32383 | unknown function | unknown function | 1 | 26520 | 26681 |
| YP_006905920.1 | NC_018831_p55 | hypothetical protein | phrog_18570 | unknown function | unknown function | 1 | 43156 | 43389 |
| YP_006905923.1 | NC_018831_p58 | hypothetical protein | phrog_17084 | unknown function | unknown function | 1 | 44731 | 45210 |
| YP_006905897.1 | NC_018831_p32 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 27553 | 27924 |
| YP_006905971.1 | NC_018831_p106 | hypothetical protein | phrog_18191 | unknown function | unknown function | -1 | 63108 | 63350 |
| YP_006905871.1 | NC_018831_p6 | endolysin | phrog_5115 | ferredoxin | moron, auxiliary metabolic gene and host takeover | 1 | 4500 | 5447 |
| YP_006905874.1 | NC_018831_p9 | head morphogenesis protein | phrog_8089 | head morphogenesis | head and packaging | 1 | 8548 | 9333 |
| YP_006905940.1 | NC_018831_p75 | hypothetical protein | phrog_7822 | unknown function | unknown function | 1 | 51904 | 52350 |
| YP_006905918.1 | NC_018831_p53 | hypothetical protein | phrog_18040 | unknown function | unknown function | 1 | 42213 | 42479 |
| YP_006905891.1 | NC_018831_p26 | hypothetical protein | phrog_6883 | unknown function | unknown function | -1 | 24315 | 25022 |
| YP_006905881.1 | NC_018831_p16 | hypothetical protein | phrog_17081 | unknown function | unknown function | 1 | 12972 | 13349 |
| YP_006905870.1 | NC_018831_p5 | holin | phrog_297 | holin | lysis | 1 | 4216 | 4500 |
| YP_006905928.1 | NC_018831_p63 | hypothetical protein | phrog_18681 | unknown function | unknown function | 1 | 46806 | 46988 |
| YP_006905898.1 | NC_018831_p33 | hypothetical protein | phrog_6154 | unknown function | unknown function | 1 | 28126 | 28509 |
| YP_006905939.1 | NC_018831_p74 | hypothetical protein | phrog_4264 | unknown function | unknown function | 1 | 51485 | 51832 |
| YP_006905906.1 | NC_018831_p41 | DNA polymerase | phrog_5995 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 34522 | 35166 |
| YP_006905915.1 | NC_018831_p50 | hypothetical protein | phrog_17709 | unknown function | unknown function | 1 | 39960 | 40238 |
| YP_006905954.1 | NC_018831_p89 | hypothetical protein | phrog_23978 | unknown function | unknown function | -1 | 58211 | 58366 |
| YP_006905867.1 | NC_018831_p2 | hypothetical protein | phrog_3639 | minor tail protein | tail | 1 | 507 | 2405 |
| YP_006905961.1 | NC_018831_p96 | hypothetical protein | phrog_2316 | unknown function | unknown function | -1 | 59860 | 60156 |
| YP_006905962.1 | NC_018831_p97 | hypothetical protein | phrog_17911 | unknown function | unknown function | -1 | 60177 | 60422 |
| YP_006905927.1 | NC_018831_p62 | hypothetical protein | phrog_18081 | unknown function | unknown function | 1 | 46320 | 46676 |
| YP_006905884.1 | NC_018831_p19 | hypothetical protein | phrog_18667 | unknown function | unknown function | 1 | 14603 | 14890 |
| YP_006905933.1 | NC_018831_p68 | endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 48576 | 49094 |
| YP_006905958.1 | NC_018831_p93 | hypothetical protein | phrog_6406 | unknown function | unknown function | -1 | 59076 | 59306 |
| YP_006905942.1 | NC_018831_p77 | hypothetical protein | phrog_16892 | unknown function | unknown function | 1 | 52707 | 53543 |
| YP_006905934.1 | NC_018831_p69 | hypothetical protein | phrog_18584 | unknown function | unknown function | 1 | 49913 | 50146 |
| YP_006905925.1 | NC_018831_p60 | hypothetical protein | phrog_17753 | unknown function | unknown function | 1 | 45627 | 46088 |
| YP_006905883.1 | NC_018831_p18 | major tail protein | phrog_41 | major tail protein | tail | 1 | 13792 | 14502 |
| YP_006905966.1 | NC_018831_p101 | hypothetical protein | phrog_28605 | unknown function | unknown function | -1 | 60918 | 61277 |
| YP_006905903.1 | NC_018831_p38 | DNA polymerase | phrog_12241 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 32111 | 33598 |
| YP_006905975.1 | NC_018831_p110 | hypothetical protein | phrog_6406 | unknown function | unknown function | -1 | 64086 | 64343 |
| YP_006905977.1 | NC_018831_p112 | hypothetical protein | phrog_6406 | unknown function | unknown function | -1 | 64571 | 64816 |
| YP_006905869.1 | NC_018831_p4 | hypothetical protein | phrog_1009 | unknown function | unknown function | 1 | 3863 | 4219 |
| YP_006905981.1 | NC_018831_p116 | hypothetical protein | phrog_17836 | unknown function | unknown function | -1 | 65542 | 65775 |
| YP_006905970.1 | NC_018831_p105 | hypothetical protein | phrog_18055 | unknown function | unknown function | -1 | 62898 | 63098 |
| YP_006905929.1 | NC_018831_p64 | hypothetical protein | phrog_6414 | unknown function | unknown function | 1 | 46995 | 47186 |
| YP_006905892.1 | NC_018831_p27 | hypothetical protein | phrog_17927 | unknown function | unknown function | -1 | 25269 | 25787 |
| YP_006905908.1 | NC_018831_p43 | exonuclease | phrog_1706 | CRISPR/Cas system associated | DNA, RNA and nucleotide metabolism | 1 | 35834 | 36859 |
| YP_006905953.1 | NC_018831_p88 | hypothetical protein | phrog_19990 | unknown function | unknown function | -1 | 58036 | 58200 |
| YP_006905872.1 | NC_018831_p7 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 5516 | 6859 |
| YP_006905937.1 | NC_018831_p72 | hypothetical protein | phrog_16753 | unknown function | unknown function | 1 | 50980 | 51273 |
| YP_006905931.1 | NC_018831_p66 | hypothetical protein | phrog_7296 | unknown function | unknown function | 1 | 47732 | 48277 |
| YP_006905926.1 | NC_018831_p61 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 46088 | 46354 |
| YP_006905984.1 | NC_018831_p119 | hypothetical protein | phrog_17111 | unknown function | unknown function | -1 | 66466 | 66852 |
| YP_006905973.1 | NC_018831_p108 | hypothetical protein | phrog_17919 | unknown function | unknown function | -1 | 63586 | 63789 |
| YP_006905900.1 | NC_018831_p35 | helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 29311 | 30639 |
| YP_006905980.1 | NC_018831_p115 | hypothetical protein | phrog_10628 | unknown function | unknown function | -1 | 65279 | 65530 |
| YP_006905882.1 | NC_018831_p17 | minor head protein | phrog_176 | tail terminator | connector | 1 | 13349 | 13768 |
| YP_006905919.1 | NC_018831_p54 | hypothetical protein | phrog_17535 | unknown function | unknown function | 1 | 42472 | 43152 |
| YP_006905904.1 | NC_018831_p39 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 33715 | 34218 |
| YP_006905976.1 | NC_018831_p111 | hypothetical protein | phrog_6406 | unknown function | unknown function | -1 | 64333 | 64578 |
| YP_006905911.1 | NC_018831_p46 | sigma factor | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 37896 | 38261 |
| YP_006905899.1 | NC_018831_p34 | replication initiator protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 28528 | 29310 |
| YP_006905907.1 | NC_018831_p42 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 35222 | 35833 |
| YP_006905960.1 | NC_018831_p95 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 59485 | 59796 |
| YP_006905946.1 | NC_018831_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55495 | 55749 |
| YP_006905947.1 | NC_018831_p82 | hypothetical protein | phrog_17121 | unknown function | unknown function | -1 | 55829 | 56023 |
| YP_006905912.1 | NC_018831_p47 | hypothetical protein | phrog_18507 | unknown function | unknown function | 1 | 38221 | 38631 |
| YP_006905936.1 | NC_018831_p71 | hypothetical protein | phrog_8573 | unknown function | unknown function | 1 | 50689 | 50964 |
| YP_006905880.1 | NC_018831_p15 | hypothetical protein | phrog_16721 | unknown function | unknown function | 1 | 12569 | 12985 |
| YP_006905905.1 | NC_018831_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34193 | 34405 |
| YP_006905902.1 | NC_018831_p37 | methyltransferase | phrog_17905 | methyltransferase | other | 1 | 31675 | 32130 |
| YP_006905909.1 | NC_018831_p44 | holiday junction resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 36856 | 37368 |
| YP_006905878.1 | NC_018831_p13 | hypothetical protein | phrog_18435 | unknown function | unknown function | 1 | 11257 | 12135 |
| YP_006905916.1 | NC_018831_p51 | transcription regulator | phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | 1 | 40260 | 41282 |
| YP_006905968.1 | NC_018831_p103 | hypothetical protein | phrog_27701 | unknown function | unknown function | -1 | 62260 | 62475 |
| YP_006905959.1 | NC_018831_p94 | hypothetical protein | phrog_21953 | unknown function | unknown function | -1 | 59299 | 59475 |
| YP_006905983.1 | NC_018831_p118 | hypothetical protein | phrog_17491 | unknown function | unknown function | -1 | 66014 | 66457 |
| YP_006905935.1 | NC_018831_p70 | hypothetical protein | phrog_17663 | unknown function | unknown function | 1 | 50249 | 50581 |
| YP_006905875.1 | NC_018831_p10 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 9403 | 10044 |
| YP_006905944.1 | NC_018831_p79 | hypothetical protein | phrog_11080 | unknown function | unknown function | 1 | 53908 | 54267 |
| YP_006905914.1 | NC_018831_p49 | DNA replication inhibitor | phrog_17749 | unknown function | unknown function | 1 | 39432 | 39656 |
| YP_006905886.1 | NC_018831_p21 | minor capsid protein | phrog_1533 | tail length tape measure protein | tail | 1 | 15697 | 18609 |
| YP_006905950.1 | NC_018831_p85 | hypothetical protein | phrog_17830 | unknown function | unknown function | -1 | 56794 | 56937 |
| YP_006905938.1 | NC_018831_p73 | hypothetical protein | phrog_17278 | unknown function | unknown function | 1 | 51273 | 51473 |
| YP_006905941.1 | NC_018831_p76 | hypothetical protein | phrog_18105 | unknown function | unknown function | 1 | 52343 | 52648 |
| YP_006905877.1 | NC_018831_p12 | hypothetical protein | phrog_17541 | unknown function | unknown function | 1 | 11046 | 11243 |
| YP_006905974.1 | NC_018831_p109 | hypothetical protein | phrog_20334 | unknown function | unknown function | -1 | 63776 | 64039 |
| YP_006905956.1 | NC_018831_p91 | hypothetical protein | phrog_18615 | unknown function | unknown function | -1 | 58620 | 58898 |
| YP_006905948.1 | NC_018831_p83 | hypothetical protein | phrog_16767 | unknown function | unknown function | -1 | 56047 | 56232 |
| YP_006905921.1 | NC_018831_p56 | hypothetical protein | phrog_17097 | unknown function | unknown function | 1 | 43373 | 43591 |
| YP_006905979.1 | NC_018831_p114 | hypothetical protein | phrog_10526 | unknown function | unknown function | -1 | 65049 | 65267 |
| YP_006905943.1 | NC_018831_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53684 | 53911 |
| YP_006905951.1 | NC_018831_p86 | hypothetical protein | phrog_121 | unknown function | unknown function | -1 | 56934 | 57320 |
| YP_006905963.1 | NC_018831_p98 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60404 | 60514 |
| YP_006905924.1 | NC_018831_p59 | hypothetical protein | phrog_17542 | unknown function | unknown function | 1 | 45200 | 45634 |
| YP_006905932.1 | NC_018831_p67 | hypothetical protein | phrog_17786 | unknown function | unknown function | 1 | 48364 | 48579 |
| YP_006905917.1 | NC_018831_p52 | hypothetical protein | phrog_7005 | unknown function | unknown function | 1 | 41301 | 42212 |
| YP_006905895.1 | NC_018831_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26866 | 26991 |
| YP_006905879.1 | NC_018831_p14 | head-tail connector | phrog_132 | head-tail adaptor | connector | 1 | 12213 | 12572 |
| YP_006905901.1 | NC_018831_p36 | primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 30716 | 31681 |
| YP_006905922.1 | NC_018831_p57 | hypothetical protein | phrog_18431 | unknown function | unknown function | 1 | 43648 | 44436 |
| YP_006905885.1 | NC_018831_p20 | hypothetical protein | phrog_17465 | unknown function | unknown function | 1 | 14953 | 15555 |
| YP_006905945.1 | NC_018831_p80 | hypothetical protein | phrog_18690 | unknown function | unknown function | 1 | 54365 | 54664 |
| YP_006905972.1 | NC_018831_p107 | hypothetical protein | phrog_18373 | unknown function | unknown function | -1 | 63363 | 63572 |
| YP_006905949.1 | NC_018831_p84 | hypothetical protein | phrog_16663 | unknown function | unknown function | -1 | 56222 | 56779 |
| YP_006905913.1 | NC_018831_p48 | hypothetical protein | phrog_18628 | unknown function | unknown function | 1 | 38724 | 39416 |
| YP_006905955.1 | NC_018831_p90 | hypothetical protein | phrog_1666 | unknown function | unknown function | -1 | 58363 | 58620 |
| YP_006905868.1 | NC_018831_p3 | hypothetical protein | phrog_18602 | virion structural protein | head and packaging | 1 | 2418 | 3857 |
| YP_006905910.1 | NC_018831_p45 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 37370 | 37918 |