| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018838 |
Definition |
Propionibacterium phage P100_A, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29505 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
53.83 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006906403.1 | NC_018838_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 383 | 1894 |
| YP_006906436.1 | NC_018838_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23340 | 23747 |
| YP_006906402.1 | NC_018838_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 55 | 378 |
| YP_006906438.1 | NC_018838_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24688 | 25041 |
| YP_006906417.1 | NC_018838_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12249 | 13406 |
| YP_006906431.1 | NC_018838_p30 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20688 | 21359 |
| YP_006906406.1 | NC_018838_p5 | head assembly scaffold | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4086 | 4649 |
| YP_006906414.1 | NC_018838_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7823 | 8119 |
| YP_006906416.1 | NC_018838_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11295 | 12242 |
| YP_006906441.1 | NC_018838_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25344 | 25571 |
| YP_006906445.1 | NC_018838_p44 | hypothetical protein | phrog_5628 | unknown function | unknown function | 1 | 28836 | 29102 |
| YP_006906444.1 | NC_018838_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26593 | 26901 |
| YP_006906440.1 | NC_018838_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25147 | 25347 |
| YP_006906408.1 | NC_018838_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5630 | 6109 |
| YP_006906405.1 | NC_018838_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3223 | 3978 |
| YP_006906433.1 | NC_018838_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21557 | 21913 |
| YP_006906422.1 | NC_018838_p21 | holin | phrog_443 | holin | lysis | 1 | 16284 | 16679 |
| YP_006906409.1 | NC_018838_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6111 | 6458 |
| YP_006906446.1 | NC_018838_p45 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29140 | 29442 |
| YP_006906426.1 | NC_018838_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17985 | 18305 |
| YP_006906443.1 | NC_018838_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26248 | 26559 |
| YP_006906420.1 | NC_018838_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14565 | 15362 |
| YP_006906412.1 | NC_018838_p11 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 7160 | 7795 |
| YP_006906428.1 | NC_018838_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19355 | 19540 |
| YP_006906418.1 | NC_018838_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13433 | 14251 |
| YP_006906419.1 | NC_018838_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14299 | 14568 |
| YP_006906434.1 | NC_018838_p33 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21913 | 22776 |
| YP_006906439.1 | NC_018838_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 25067 | 25150 |
| YP_006906411.1 | NC_018838_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6751 | 7122 |
| YP_006906407.1 | NC_018838_p6 | capsid | phrog_10 | major head protein | head and packaging | 1 | 4656 | 5603 |
| YP_006906404.1 | NC_018838_p3 | portal | phrog_104 | portal protein | head and packaging | 1 | 1891 | 3216 |
| YP_006906415.1 | NC_018838_p14 | tape measure | phrog_58 | tail length tape measure protein | tail | 1 | 8513 | 11278 |
| YP_006906437.1 | NC_018838_p36 | hypothetical protein | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23744 | 24688 |
| YP_006906435.1 | NC_018838_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22823 | 23284 |
| YP_006906413.1 | NC_018838_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7823 | 8505 |
| YP_006906432.1 | NC_018838_p31 | hypothetical protein | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21196 | 21597 |
| YP_006906429.1 | NC_018838_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19524 | 20081 |
| YP_006906421.1 | NC_018838_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15417 | 16271 |
| YP_006906424.1 | NC_018838_p23 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17288 | 17680 |
| YP_006906442.1 | NC_018838_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25594 | 26178 |
| YP_006906430.1 | NC_018838_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20078 | 20644 |
| YP_006906425.1 | NC_018838_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17684 | 17968 |
| YP_006906410.1 | NC_018838_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6464 | 6754 |
| YP_006906427.1 | NC_018838_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18315 | 19358 |
| YP_006906423.1 | NC_018838_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16765 | 17310 |