| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018839 |
Definition |
Propionibacterium phage P14.4, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29729 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
54.08 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006906493.1 | NC_018839_p47 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29362 | 29667 |
| YP_006906462.1 | NC_018839_p16 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 12243 | 13403 |
| YP_006906472.1 | NC_018839_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18284 | 19327 |
| YP_006906448.1 | NC_018839_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_006906450.1 | NC_018839_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_006906476.1 | NC_018839_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20669 | 21340 |
| YP_006906489.1 | NC_018839_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26623 | 26934 |
| YP_006906486.1 | NC_018839_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25337 | 25567 |
| YP_006906487.1 | NC_018839_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25590 | 26210 |
| YP_006906485.1 | NC_018839_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25135 | 25344 |
| YP_006906455.1 | NC_018839_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6447 | 6737 |
| YP_006906484.1 | NC_018839_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 25055 | 25138 |
| YP_006906471.1 | NC_018839_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17953 | 18273 |
| YP_006906451.1 | NC_018839_p5 | head assembly scaffold | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4077 | 4631 |
| YP_006906473.1 | NC_018839_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19324 | 19491 |
| YP_006906459.1 | NC_018839_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7820 | 8116 |
| YP_006906475.1 | NC_018839_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20059 | 20625 |
| YP_006906477.1 | NC_018839_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21177 | 21578 |
| YP_006906460.1 | NC_018839_p14 | tapemeasure | phrog_58 | tail length tape measure protein | tail | 1 | 8510 | 11275 |
| YP_006906461.1 | NC_018839_p15 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 11291 | 12238 |
| YP_006906463.1 | NC_018839_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13421 | 14239 |
| YP_006906464.1 | NC_018839_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14284 | 14547 |
| YP_006906454.1 | NC_018839_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6093 | 6440 |
| YP_006906452.1 | NC_018839_p6 | capsid | phrog_10 | major head protein | head and packaging | 1 | 4638 | 5585 |
| YP_006906449.1 | NC_018839_p3 | portal | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_006906465.1 | NC_018839_p19 | hypothetical protein | phrog_1806 | collagen like minor tail | tail | 1 | 14550 | 15338 |
| YP_006906479.1 | NC_018839_p33 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21804 | 22757 |
| YP_006906453.1 | NC_018839_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5612 | 6091 |
| YP_006906482.1 | NC_018839_p36 | hypothetical protein | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23729 | 24676 |
| YP_006906457.1 | NC_018839_p11 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 7116 | 7793 |
| YP_006906458.1 | NC_018839_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7820 | 8502 |
| YP_006906488.1 | NC_018839_p42 | hypothetical protein | phrog_7707 | unknown function | unknown function | -1 | 26207 | 26494 |
| YP_006906491.1 | NC_018839_p45 | hypothetical protein | phrog_14941 | unknown function | unknown function | -1 | 27783 | 28025 |
| YP_006906467.1 | NC_018839_p21 | holin | phrog_443 | holin | lysis | 1 | 16250 | 16648 |
| YP_006906474.1 | NC_018839_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19496 | 20062 |
| YP_006906469.1 | NC_018839_p23 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17252 | 17650 |
| YP_006906490.1 | NC_018839_p44 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26972 | 27280 |
| YP_006906481.1 | NC_018839_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23322 | 23732 |
| YP_006906468.1 | NC_018839_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16732 | 17247 |
| YP_006906456.1 | NC_018839_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6773 | 7105 |
| YP_006906470.1 | NC_018839_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17654 | 17938 |
| YP_006906483.1 | NC_018839_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24676 | 25029 |
| YP_006906447.1 | NC_018839_p1 | hypothetical protein | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_006906466.1 | NC_018839_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15380 | 16237 |
| YP_006906492.1 | NC_018839_p46 | hypothetical protein | phrog_5628 | unknown function | unknown function | 1 | 29167 | 29328 |
| YP_006906480.1 | NC_018839_p34 | RecB | phrog_1288 | unknown function | unknown function | -1 | 22798 | 23271 |
| YP_006906478.1 | NC_018839_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21538 | 21894 |