| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018840 |
Definition |
Propionibacterium phage P100_1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29612 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
54.06 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006906495.1 | NC_018840_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_006906524.1 | NC_018840_p31 | hypothetical protein | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21252 | 21647 |
| YP_006906500.1 | NC_018840_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5608 | 6087 |
| YP_006906535.1 | NC_018840_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26245 | 26415 |
| YP_006906501.1 | NC_018840_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6089 | 6436 |
| YP_006906506.1 | NC_018840_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7829 | 8125 |
| YP_006906512.1 | NC_018840_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14565 | 15389 |
| YP_006906509.1 | NC_018840_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12249 | 13406 |
| YP_006906497.1 | NC_018840_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_006906531.1 | NC_018840_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 25135 | 25218 |
| YP_006906534.1 | NC_018840_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25657 | 26190 |
| YP_006906515.1 | NC_018840_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16811 | 17332 |
| YP_006906494.1 | NC_018840_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_006906528.1 | NC_018840_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23396 | 23806 |
| YP_006906536.1 | NC_018840_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26543 | 26854 |
| YP_006906523.1 | NC_018840_p30 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20738 | 21409 |
| YP_006906538.1 | NC_018840_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27712 | 27861 |
| YP_006906517.1 | NC_018840_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17727 | 17999 |
| YP_006906511.1 | NC_018840_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14298 | 14561 |
| YP_006906527.1 | NC_018840_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22875 | 23345 |
| YP_006906522.1 | NC_018840_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20136 | 20699 |
| YP_006906507.1 | NC_018840_p14 | tape measure | phrog_58 | tail length tape measure protein | tail | 1 | 8519 | 11284 |
| YP_006906498.1 | NC_018840_p5 | head assembly scaffold | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4077 | 4631 |
| YP_006906505.1 | NC_018840_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7829 | 8511 |
| YP_006906504.1 | NC_018840_p11 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 7148 | 7801 |
| YP_006906514.1 | NC_018840_p21 | holin | phrog_443 | holin | lysis | 1 | 16323 | 16724 |
| YP_006906499.1 | NC_018840_p6 | capsid | phrog_10 | major head protein | head and packaging | 1 | 4638 | 5582 |
| YP_006906508.1 | NC_018840_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11300 | 12241 |
| YP_006906530.1 | NC_018840_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24750 | 25109 |
| YP_006906519.1 | NC_018840_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18349 | 19395 |
| YP_006906533.1 | NC_018840_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25412 | 25639 |
| YP_006906539.1 | NC_018840_p46 | hypothetical protein | phrog_5628 | unknown function | unknown function | 1 | 28975 | 29211 |
| YP_006906520.1 | NC_018840_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19392 | 19589 |
| YP_006906513.1 | NC_018840_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15447 | 16310 |
| YP_006906529.1 | NC_018840_p36 | hypothetical protein | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23803 | 24750 |
| YP_006906525.1 | NC_018840_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21607 | 21963 |
| YP_006906503.1 | NC_018840_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6730 | 7101 |
| YP_006906521.1 | NC_018840_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19573 | 20139 |
| YP_006906532.1 | NC_018840_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25215 | 25415 |
| YP_006906516.1 | NC_018840_p23 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17338 | 17730 |
| YP_006906540.1 | NC_018840_p47 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29248 | 29550 |
| YP_006906496.1 | NC_018840_p3 | portal | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_006906518.1 | NC_018840_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 18018 | 18338 |
| YP_006906510.1 | NC_018840_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13423 | 14241 |
| YP_006906526.1 | NC_018840_p33 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21970 | 22833 |
| YP_006906502.1 | NC_018840_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6443 | 6733 |
| YP_006906537.1 | NC_018840_p44 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26886 | 27194 |