Genomic map of Propionibacterium phage P100_1 (NC_018840)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018840
Definition
Propionibacterium phage P100_1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29612
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
54.06
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006906495.1 NC_018840_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 378 1889
YP_006906524.1 NC_018840_p31 hypothetical protein phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21252 21647
YP_006906500.1 NC_018840_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5608 6087
YP_006906535.1 NC_018840_p42 hypothetical protein singleton unknown function unknown function -1 26245 26415
YP_006906501.1 NC_018840_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6089 6436
YP_006906506.1 NC_018840_p13 tail assembly chaperone phrog_1927 tail assembly chaperone tail 1 7829 8125
YP_006906512.1 NC_018840_p19 minor tail protein phrog_1806 collagen like minor tail tail 1 14565 15389
YP_006906509.1 NC_018840_p16 minor tail protein phrog_110 minor tail protein tail 1 12249 13406
YP_006906497.1 NC_018840_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3218 3973
YP_006906531.1 NC_018840_p38 hypothetical protein phrog_4216 unknown function unknown function -1 25135 25218
YP_006906534.1 NC_018840_p41 hypothetical protein phrog_1908 unknown function unknown function -1 25657 26190
YP_006906515.1 NC_018840_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16811 17332
YP_006906494.1 NC_018840_p1 terminase small subunit phrog_1897 terminase small subunit head and packaging 1 2 373
YP_006906528.1 NC_018840_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23396 23806
YP_006906536.1 NC_018840_p43 hypothetical protein phrog_919 unknown function unknown function -1 26543 26854
YP_006906523.1 NC_018840_p30 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20738 21409
YP_006906538.1 NC_018840_p45 hypothetical protein singleton unknown function unknown function -1 27712 27861
YP_006906517.1 NC_018840_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17727 17999
YP_006906511.1 NC_018840_p18 minor tail protein phrog_1958 minor tail protein tail 1 14298 14561
YP_006906527.1 NC_018840_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22875 23345
YP_006906522.1 NC_018840_p29 hypothetical protein phrog_1881 unknown function unknown function -1 20136 20699
YP_006906507.1 NC_018840_p14 tape measure phrog_58 tail length tape measure protein tail 1 8519 11284
YP_006906498.1 NC_018840_p5 head assembly scaffold phrog_1879 head scaffolding protein head and packaging 1 4077 4631
YP_006906505.1 NC_018840_p12 tail assembly chaperone phrog_4075 tail assembly chaperone tail 1 7829 8511
YP_006906504.1 NC_018840_p11 major tail subunit phrog_117 major tail protein tail 1 7148 7801
YP_006906514.1 NC_018840_p21 holin phrog_443 holin lysis 1 16323 16724
YP_006906499.1 NC_018840_p6 capsid phrog_10 major head protein head and packaging 1 4638 5582
YP_006906508.1 NC_018840_p15 minor tail protein phrog_106 minor tail protein tail 1 11300 12241
YP_006906530.1 NC_018840_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24750 25109
YP_006906519.1 NC_018840_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18349 19395
YP_006906533.1 NC_018840_p40 hypothetical protein phrog_1884 unknown function unknown function -1 25412 25639
YP_006906539.1 NC_018840_p46 hypothetical protein phrog_5628 unknown function unknown function 1 28975 29211
YP_006906520.1 NC_018840_p27 hypothetical protein phrog_1923 unknown function unknown function -1 19392 19589
YP_006906513.1 NC_018840_p20 endolysin phrog_670 endolysin lysis 1 15447 16310
YP_006906529.1 NC_018840_p36 hypothetical protein phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23803 24750
YP_006906525.1 NC_018840_p32 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21607 21963
YP_006906503.1 NC_018840_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6730 7101
YP_006906521.1 NC_018840_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19573 20139
YP_006906532.1 NC_018840_p39 hypothetical protein phrog_1937 unknown function unknown function -1 25215 25415
YP_006906516.1 NC_018840_p23 hypothetical protein phrog_1729 unknown function unknown function -1 17338 17730
YP_006906540.1 NC_018840_p47 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29248 29550
YP_006906496.1 NC_018840_p3 portal phrog_104 portal protein head and packaging 1 1886 3211
YP_006906518.1 NC_018840_p25 hypothetical protein phrog_1340 unknown function unknown function -1 18018 18338
YP_006906510.1 NC_018840_p17 minor tail protein phrog_1910 lectin other 1 13423 14241
YP_006906526.1 NC_018840_p33 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21970 22833
YP_006906502.1 NC_018840_p9 hypothetical protein phrog_387 neck protein connector 1 6443 6733
YP_006906537.1 NC_018840_p44 hypothetical protein phrog_919 unknown function unknown function -1 26886 27194