| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018842 |
Definition |
Propionibacterium phage P1.1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29348 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
54.36 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006906618.1 | NC_018842_p31 | hypothetical protein | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21209 | 21610 |
| YP_006906590.1 | NC_018842_p3 | portal | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_006906613.1 | NC_018842_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18308 | 19354 |
| YP_006906610.1 | NC_018842_p23 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17295 | 17693 |
| YP_006906603.1 | NC_018842_p16 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 12239 | 13399 |
| YP_006906626.1 | NC_018842_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25168 | 25371 |
| YP_006906588.1 | NC_018842_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_006906589.1 | NC_018842_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_006906631.1 | NC_018842_p44 | hypothetical protein | phrog_5628 | unknown function | unknown function | 1 | 28801 | 28947 |
| YP_006906607.1 | NC_018842_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15418 | 16272 |
| YP_006906609.1 | NC_018842_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16769 | 17290 |
| YP_006906604.1 | NC_018842_p17 | hypothetical protein | phrog_1910 | lectin | other | 1 | 13407 | 14237 |
| YP_006906605.1 | NC_018842_p18 | hypothetical protein | phrog_1958 | minor tail protein | tail | 1 | 14294 | 14557 |
| YP_006906619.1 | NC_018842_p32 | hypothetical protein | phrog_11072 | unknown function | unknown function | -1 | 21570 | 21767 |
| YP_006906623.1 | NC_018842_p36 | hypothetical protein | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23759 | 24727 |
| YP_006906629.1 | NC_018842_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26275 | 26586 |
| YP_006906617.1 | NC_018842_p30 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20701 | 21372 |
| YP_006906599.1 | NC_018842_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7822 | 8504 |
| YP_006906592.1 | NC_018842_p5 | head assembly scaffold | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4084 | 4638 |
| YP_006906602.1 | NC_018842_p15 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 11293 | 12234 |
| YP_006906627.1 | NC_018842_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25368 | 25595 |
| YP_006906600.1 | NC_018842_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7822 | 8118 |
| YP_006906601.1 | NC_018842_p14 | tapemeasure | phrog_58 | tail length tape measure protein | tail | 1 | 8512 | 11277 |
| YP_006906632.1 | NC_018842_p45 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28981 | 29286 |
| YP_006906625.1 | NC_018842_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 25088 | 25171 |
| YP_006906628.1 | NC_018842_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25621 | 26154 |
| YP_006906608.1 | NC_018842_p21 | holin | phrog_443 | holin | lysis | 1 | 16285 | 16683 |
| YP_006906621.1 | NC_018842_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22836 | 23309 |
| YP_006906630.1 | NC_018842_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26618 | 26926 |
| YP_006906598.1 | NC_018842_p11 | minor tail subunit | phrog_117 | major tail protein | tail | 1 | 7152 | 7793 |
| YP_006906593.1 | NC_018842_p6 | capsid | phrog_10 | major head protein | head and packaging | 1 | 4645 | 5592 |
| YP_006906611.1 | NC_018842_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17690 | 17962 |
| YP_006906616.1 | NC_018842_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20083 | 20649 |
| YP_006906596.1 | NC_018842_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6453 | 6743 |
| YP_006906591.1 | NC_018842_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_006906615.1 | NC_018842_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19532 | 20086 |
| YP_006906595.1 | NC_018842_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6099 | 6446 |
| YP_006906594.1 | NC_018842_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5618 | 6097 |
| YP_006906620.1 | NC_018842_p33 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21836 | 22789 |
| YP_006906612.1 | NC_018842_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17977 | 18297 |
| YP_006906597.1 | NC_018842_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6740 | 7111 |
| YP_006906622.1 | NC_018842_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23352 | 23762 |
| YP_006906606.1 | NC_018842_p19 | hypothetical protein | phrog_1806 | collagen like minor tail | tail | 1 | 14561 | 15376 |
| YP_006906624.1 | NC_018842_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24706 | 25059 |
| YP_006906614.1 | NC_018842_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19351 | 19548 |