| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018846 |
Definition |
Escherichia phage P13374, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Oslovirus; unclassified Oslovirus. |
DB of origin |
REFSEQ |
Length |
60894 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
79 |
%GC |
50.22 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006906824.1 | NC_018846_p7 | methylase | phrog_359 | DNA methyltransferase | other | -1 | 2899 | 3525 |
| YP_006906841.1 | NC_018846_p24 | hypothetical protein | phrog_1635 | unknown function | unknown function | -1 | 11695 | 11976 |
| YP_006906837.1 | NC_018846_p20 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 9153 | 9740 |
| YP_006906846.1 | NC_018846_p29 | regulatory protein | phrog_995 | transcriptional regulator | transcription regulation | -1 | 13201 | 13986 |
| YP_006906874.1 | NC_018846_p57 | phage terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 32296 | 34002 |
| YP_006906854.1 | NC_018846_p37 | primase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 20542 | 21513 |
| YP_006906831.1 | NC_018846_p14 | hypothetical protein | phrog_1667 | unknown function | unknown function | -1 | 6095 | 6535 |
| YP_006906820.1 | NC_018846_p3 | hypothetical protein | phrog_31437 | unknown function | unknown function | 1 | 1642 | 1884 |
| YP_006906858.1 | NC_018846_p41 | antiterminator Q | phrog_79 | anti-termination protein Q-like | transcription regulation | 1 | 22717 | 23151 |
| YP_006906829.1 | NC_018846_p12 | hypothetical protein | phrog_60 | unknown function | unknown function | -1 | 5003 | 5899 |
| YP_006906895.1 | NC_018846_p78 | hypothetical protein | phrog_616 | unknown function | unknown function | 1 | 51952 | 60372 |
| YP_006906843.1 | NC_018846_p26 | antitermination | phrog_1760 | anti-repressor | transcription regulation | -1 | 12271 | 12945 |
| YP_006906893.1 | NC_018846_p76 | hypothetical protein | phrog_594 | unknown function | unknown function | 1 | 50394 | 50645 |
| YP_006906871.1 | NC_018846_p54 | endopeptidase | phrog_13 | Rz-like spanin | lysis | 1 | 30034 | 30462 |
| YP_006906830.1 | NC_018846_p13 | hypothetical protein | phrog_1222 | unknown function | unknown function | -1 | 5902 | 6135 |
| YP_006906822.1 | NC_018846_p5 | hypothetical protein | phrog_1888 | unknown function | unknown function | -1 | 2338 | 2691 |
| YP_006906834.1 | NC_018846_p17 | hypothetical protein | phrog_210 | unknown function | unknown function | -1 | 7847 | 8668 |
| YP_006906878.1 | NC_018846_p61 | hypothetical protein | phrog_486 | virion structural protein | head and packaging | 1 | 38605 | 38994 |
| YP_006906876.1 | NC_018846_p59 | hypothetical protein | phrog_479 | unknown function | unknown function | 1 | 36304 | 37311 |
| YP_006906819.1 | NC_018846_p2 | excisionase | phrog_539 | excisionase | integration and excision | -1 | 1392 | 1691 |
| YP_006906887.1 | NC_018846_p70 | hypothetical protein | phrog_425 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 46912 | 47529 |
| YP_006906842.1 | NC_018846_p25 | host killing protein | phrog_294 | Kil protein for bacterial septation inhibition | other | -1 | 11988 | 12200 |
| YP_006906881.1 | NC_018846_p64 | hypothetical protein | phrog_399 | structural protein | head and packaging | 1 | 40052 | 40702 |
| YP_006906875.1 | NC_018846_p58 | phage portal protein | phrog_156 | portal protein | head and packaging | 1 | 34002 | 36146 |
| YP_006906882.1 | NC_018846_p65 | phage tail fibre | phrog_366 | tail fiber protein | tail | 1 | 40849 | 42891 |
| YP_006906857.1 | NC_018846_p40 | hypothetical protein | phrog_268 | unknown function | unknown function | 1 | 22530 | 22724 |
| YP_006906848.1 | NC_018846_p31 | DNA methylase | phrog_1600 | DNA methyltransferase | other | -1 | 15553 | 17022 |
| YP_006906864.1 | NC_018846_p47 | hypothetical protein | phrog_143 | unknown function | unknown function | 1 | 25660 | 27597 |
| YP_006906825.1 | NC_018846_p8 | regulatory protein | phrog_1680 | unknown function | unknown function | -1 | 3522 | 3878 |
| YP_006906896.1 | NC_018846_p79 | hypothetical protein | phrog_17575 | unknown function | unknown function | -1 | 60438 | 60554 |
| YP_006906856.1 | NC_018846_p39 | recombination endonuclease | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 21967 | 22533 |
| YP_006906890.1 | NC_018846_p73 | hypothetical protein | phrog_610 | unknown function | unknown function | 1 | 48784 | 49185 |
| YP_006906821.1 | NC_018846_p4 | hypothetical protein | phrog_37207 | unknown function | unknown function | 1 | 2235 | 2357 |
| YP_006906873.1 | NC_018846_p56 | phage terminase small subunit | phrog_370 | terminase small subunit | head and packaging | 1 | 31509 | 32315 |
| YP_006906836.1 | NC_018846_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 8887 | 9078 |
| YP_006906861.1 | NC_018846_p44 | shiga toxin 2 subunit B | phrog_851 | Shiga toxin subunit B | moron, auxiliary metabolic gene and host takeover | 1 | 24905 | 25174 |
| YP_006906886.1 | NC_018846_p69 | phage tail fibre tip | phrog_496 | tail fiber protein | tail | 1 | 45345 | 46613 |
| YP_006906849.1 | NC_018846_p32 | prophage repressor CI | phrog_4 | transcriptional repressor | transcription regulation | -1 | 17117 | 17830 |
| YP_006906892.1 | NC_018846_p75 | hypothetical protein | phrog_596 | unknown function | unknown function | 1 | 49938 | 50384 |
| YP_006906839.1 | NC_018846_p22 | recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 10426 | 11445 |
| YP_006906868.1 | NC_018846_p51 | lysis protein, lysozyme | phrog_7 | endolysin | lysis | 1 | 28497 | 29030 |
| YP_006906862.1 | NC_018846_p45 | hypothetical protein | phrog_24488 | unknown function | unknown function | -1 | 25249 | 25416 |
| YP_006906832.1 | NC_018846_p15 | hypothetical protein | phrog_368 | unknown function | unknown function | -1 | 6499 | 7224 |
| YP_006906866.1 | NC_018846_p49 | hypothetical protein | phrog_311 | unknown function | unknown function | 1 | 27954 | 28199 |
| YP_006906850.1 | NC_018846_p33 | cro repressor | phrog_35 | transcriptional repressor | transcription regulation | 1 | 17902 | 18129 |
| YP_006906889.1 | NC_018846_p72 | prophage host toxic membrane protein | phrog_251 | MokW-like host killing | moron, auxiliary metabolic gene and host takeover | 1 | 48587 | 48727 |
| YP_006906891.1 | NC_018846_p74 | hypothetical protein | phrog_611 | unknown function | unknown function | 1 | 49279 | 49935 |
| YP_006906828.1 | NC_018846_p11 | hypothetical protein | phrog_38841 | unknown function | unknown function | 1 | 4646 | 5038 |
| YP_006906888.1 | NC_018846_p71 | outer membrane lom precursor | phrog_108 | Lom outer membrane protein | other | 1 | 47620 | 48354 |
| YP_006906859.1 | NC_018846_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23178 | 23384 |
| YP_006906855.1 | NC_018846_p38 | hypothetical protein | phrog_319 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 21513 | 21962 |
| YP_006906880.1 | NC_018846_p63 | hypothetical protein | phrog_437 | virion structural protein | head and packaging | 1 | 39489 | 40052 |
| YP_006906894.1 | NC_018846_p77 | hypothetical protein | phrog_601 | unknown function | unknown function | 1 | 50656 | 51921 |
| YP_006906844.1 | NC_018846_p27 | antirepressor antB | phrog_35956 | anti-repressor | transcription regulation | -1 | 12956 | 13102 |
| YP_006906865.1 | NC_018846_p48 | hypothetical protein | phrog_494 | unknown function | unknown function | 1 | 27734 | 27913 |
| YP_006906818.1 | NC_018846_p1 | phage integrase | phrog_1 | integrase | integration and excision | -1 | 29 | 1339 |
| YP_006906869.1 | NC_018846_p52 | antirepressor | phrog_524 | anti-repressor Ant | transcription regulation | 1 | 29304 | 29873 |
| YP_006906877.1 | NC_018846_p60 | structural protein | phrog_334 | major head protein | head and packaging | 1 | 37335 | 38549 |
| YP_006906884.1 | NC_018846_p67 | hypothetical protein | phrog_511 | internal virion protein | head and packaging | 1 | 43658 | 45148 |
| YP_006906840.1 | NC_018846_p23 | hypothetical protein | phrog_1050 | gam-like host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 11393 | 11674 |
| YP_006906847.1 | NC_018846_p30 | restriction endonuclease | phrog_1639 | restriction endonuclease | DNA, RNA and nucleotide metabolism | -1 | 14603 | 15556 |
| YP_006906835.1 | NC_018846_p18 | hypothetical protein | phrog_17027 | unknown function | unknown function | -1 | 8732 | 8869 |
| YP_006906870.1 | NC_018846_p53 | hypothetical protein | phrog_4906 | unknown function | unknown function | 1 | 29873 | 30022 |
| YP_006906838.1 | NC_018846_p21 | exonuclease | phrog_149 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 9740 | 10429 |
| YP_006906826.1 | NC_018846_p9 | hypothetical protein | phrog_35401 | unknown function | unknown function | 1 | 3987 | 4103 |
| YP_006906860.1 | NC_018846_p43 | shiga toxin 2 subunit A | phrog_866 | Shiga toxin subunit A | moron, auxiliary metabolic gene and host takeover | 1 | 23934 | 24893 |
| YP_006906867.1 | NC_018846_p50 | lysis protein, holin | phrog_20 | holin | lysis | 1 | 28202 | 28492 |
| YP_006906845.1 | NC_018846_p28 | hypothetical protein | phrog_36703 | unknown function | unknown function | 1 | 13101 | 13295 |
| YP_006906833.1 | NC_018846_p16 | hypothetical protein | phrog_1363 | unknown function | unknown function | -1 | 7375 | 7770 |
| YP_006906853.1 | NC_018846_p36 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 19032 | 20552 |
| YP_006906879.1 | NC_018846_p62 | hypothetical protein | phrog_482 | unknown function | unknown function | 1 | 39017 | 39505 |
| YP_006906872.1 | NC_018846_p55 | regulatory protein | phrog_518 | Rha-like transcriptional regulator | transcription regulation | 1 | 30665 | 31216 |
| YP_006906885.1 | NC_018846_p68 | hypothetical protein | phrog_25801 | unknown function | unknown function | 1 | 45184 | 45348 |
| YP_006906851.1 | NC_018846_p34 | hypothetical protein | phrog_852 | unknown function | unknown function | 1 | 18184 | 18453 |
| YP_006906883.1 | NC_018846_p66 | tail fibre adesine | phrog_1121 | tail fiber adhesin | tail | 1 | 42978 | 43490 |
| YP_006906827.1 | NC_018846_p10 | antirepressor antB | phrog_377 | anti-repressor Ant | transcription regulation | -1 | 4009 | 4647 |
| YP_006906863.1 | NC_018846_p46 | hypothetical protein | phrog_31368 | unknown function | unknown function | -1 | 25517 | 25639 |
| YP_006906823.1 | NC_018846_p6 | hypothetical protein | phrog_292 | unknown function | unknown function | -1 | 2727 | 3023 |
| YP_006906852.1 | NC_018846_p35 | hypothetical protein | phrog_1347 | unknown function | unknown function | 1 | 18661 | 19038 |