Genomic map of Escherichia phage P13374 (NC_018846)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018846
Definition
Escherichia phage P13374, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Oslovirus; unclassified Oslovirus.
DB of origin
REFSEQ
Length
60894
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
50.22
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006906824.1 NC_018846_p7 methylase phrog_359 DNA methyltransferase other -1 2899 3525
YP_006906841.1 NC_018846_p24 hypothetical protein phrog_1635 unknown function unknown function -1 11695 11976
YP_006906837.1 NC_018846_p20 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 9153 9740
YP_006906846.1 NC_018846_p29 regulatory protein phrog_995 transcriptional regulator transcription regulation -1 13201 13986
YP_006906874.1 NC_018846_p57 phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 32296 34002
YP_006906854.1 NC_018846_p37 primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism 1 20542 21513
YP_006906831.1 NC_018846_p14 hypothetical protein phrog_1667 unknown function unknown function -1 6095 6535
YP_006906820.1 NC_018846_p3 hypothetical protein phrog_31437 unknown function unknown function 1 1642 1884
YP_006906858.1 NC_018846_p41 antiterminator Q phrog_79 anti-termination protein Q-like transcription regulation 1 22717 23151
YP_006906829.1 NC_018846_p12 hypothetical protein phrog_60 unknown function unknown function -1 5003 5899
YP_006906895.1 NC_018846_p78 hypothetical protein phrog_616 unknown function unknown function 1 51952 60372
YP_006906843.1 NC_018846_p26 antitermination phrog_1760 anti-repressor transcription regulation -1 12271 12945
YP_006906893.1 NC_018846_p76 hypothetical protein phrog_594 unknown function unknown function 1 50394 50645
YP_006906871.1 NC_018846_p54 endopeptidase phrog_13 Rz-like spanin lysis 1 30034 30462
YP_006906830.1 NC_018846_p13 hypothetical protein phrog_1222 unknown function unknown function -1 5902 6135
YP_006906822.1 NC_018846_p5 hypothetical protein phrog_1888 unknown function unknown function -1 2338 2691
YP_006906834.1 NC_018846_p17 hypothetical protein phrog_210 unknown function unknown function -1 7847 8668
YP_006906878.1 NC_018846_p61 hypothetical protein phrog_486 virion structural protein head and packaging 1 38605 38994
YP_006906876.1 NC_018846_p59 hypothetical protein phrog_479 unknown function unknown function 1 36304 37311
YP_006906819.1 NC_018846_p2 excisionase phrog_539 excisionase integration and excision -1 1392 1691
YP_006906887.1 NC_018846_p70 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 46912 47529
YP_006906842.1 NC_018846_p25 host killing protein phrog_294 Kil protein for bacterial septation inhibition other -1 11988 12200
YP_006906881.1 NC_018846_p64 hypothetical protein phrog_399 structural protein head and packaging 1 40052 40702
YP_006906875.1 NC_018846_p58 phage portal protein phrog_156 portal protein head and packaging 1 34002 36146
YP_006906882.1 NC_018846_p65 phage tail fibre phrog_366 tail fiber protein tail 1 40849 42891
YP_006906857.1 NC_018846_p40 hypothetical protein phrog_268 unknown function unknown function 1 22530 22724
YP_006906848.1 NC_018846_p31 DNA methylase phrog_1600 DNA methyltransferase other -1 15553 17022
YP_006906864.1 NC_018846_p47 hypothetical protein phrog_143 unknown function unknown function 1 25660 27597
YP_006906825.1 NC_018846_p8 regulatory protein phrog_1680 unknown function unknown function -1 3522 3878
YP_006906896.1 NC_018846_p79 hypothetical protein phrog_17575 unknown function unknown function -1 60438 60554
YP_006906856.1 NC_018846_p39 recombination endonuclease phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 21967 22533
YP_006906890.1 NC_018846_p73 hypothetical protein phrog_610 unknown function unknown function 1 48784 49185
YP_006906821.1 NC_018846_p4 hypothetical protein phrog_37207 unknown function unknown function 1 2235 2357
YP_006906873.1 NC_018846_p56 phage terminase small subunit phrog_370 terminase small subunit head and packaging 1 31509 32315
YP_006906836.1 NC_018846_p19 hypothetical protein singleton unknown function unknown function -1 8887 9078
YP_006906861.1 NC_018846_p44 shiga toxin 2 subunit B phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 24905 25174
YP_006906886.1 NC_018846_p69 phage tail fibre tip phrog_496 tail fiber protein tail 1 45345 46613
YP_006906849.1 NC_018846_p32 prophage repressor CI phrog_4 transcriptional repressor transcription regulation -1 17117 17830
YP_006906892.1 NC_018846_p75 hypothetical protein phrog_596 unknown function unknown function 1 49938 50384
YP_006906839.1 NC_018846_p22 recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 10426 11445
YP_006906868.1 NC_018846_p51 lysis protein, lysozyme phrog_7 endolysin lysis 1 28497 29030
YP_006906862.1 NC_018846_p45 hypothetical protein phrog_24488 unknown function unknown function -1 25249 25416
YP_006906832.1 NC_018846_p15 hypothetical protein phrog_368 unknown function unknown function -1 6499 7224
YP_006906866.1 NC_018846_p49 hypothetical protein phrog_311 unknown function unknown function 1 27954 28199
YP_006906850.1 NC_018846_p33 cro repressor phrog_35 transcriptional repressor transcription regulation 1 17902 18129
YP_006906889.1 NC_018846_p72 prophage host toxic membrane protein phrog_251 MokW-like host killing moron, auxiliary metabolic gene and host takeover 1 48587 48727
YP_006906891.1 NC_018846_p74 hypothetical protein phrog_611 unknown function unknown function 1 49279 49935
YP_006906828.1 NC_018846_p11 hypothetical protein phrog_38841 unknown function unknown function 1 4646 5038
YP_006906888.1 NC_018846_p71 outer membrane lom precursor phrog_108 Lom outer membrane protein other 1 47620 48354
YP_006906859.1 NC_018846_p42 hypothetical protein singleton unknown function unknown function -1 23178 23384
YP_006906855.1 NC_018846_p38 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 21513 21962
YP_006906880.1 NC_018846_p63 hypothetical protein phrog_437 virion structural protein head and packaging 1 39489 40052
YP_006906894.1 NC_018846_p77 hypothetical protein phrog_601 unknown function unknown function 1 50656 51921
YP_006906844.1 NC_018846_p27 antirepressor antB phrog_35956 anti-repressor transcription regulation -1 12956 13102
YP_006906865.1 NC_018846_p48 hypothetical protein phrog_494 unknown function unknown function 1 27734 27913
YP_006906818.1 NC_018846_p1 phage integrase phrog_1 integrase integration and excision -1 29 1339
YP_006906869.1 NC_018846_p52 antirepressor phrog_524 anti-repressor Ant transcription regulation 1 29304 29873
YP_006906877.1 NC_018846_p60 structural protein phrog_334 major head protein head and packaging 1 37335 38549
YP_006906884.1 NC_018846_p67 hypothetical protein phrog_511 internal virion protein head and packaging 1 43658 45148
YP_006906840.1 NC_018846_p23 hypothetical protein phrog_1050 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 11393 11674
YP_006906847.1 NC_018846_p30 restriction endonuclease phrog_1639 restriction endonuclease DNA, RNA and nucleotide metabolism -1 14603 15556
YP_006906835.1 NC_018846_p18 hypothetical protein phrog_17027 unknown function unknown function -1 8732 8869
YP_006906870.1 NC_018846_p53 hypothetical protein phrog_4906 unknown function unknown function 1 29873 30022
YP_006906838.1 NC_018846_p21 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 9740 10429
YP_006906826.1 NC_018846_p9 hypothetical protein phrog_35401 unknown function unknown function 1 3987 4103
YP_006906860.1 NC_018846_p43 shiga toxin 2 subunit A phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 23934 24893
YP_006906867.1 NC_018846_p50 lysis protein, holin phrog_20 holin lysis 1 28202 28492
YP_006906845.1 NC_018846_p28 hypothetical protein phrog_36703 unknown function unknown function 1 13101 13295
YP_006906833.1 NC_018846_p16 hypothetical protein phrog_1363 unknown function unknown function -1 7375 7770
YP_006906853.1 NC_018846_p36 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 19032 20552
YP_006906879.1 NC_018846_p62 hypothetical protein phrog_482 unknown function unknown function 1 39017 39505
YP_006906872.1 NC_018846_p55 regulatory protein phrog_518 Rha-like transcriptional regulator transcription regulation 1 30665 31216
YP_006906885.1 NC_018846_p68 hypothetical protein phrog_25801 unknown function unknown function 1 45184 45348
YP_006906851.1 NC_018846_p34 hypothetical protein phrog_852 unknown function unknown function 1 18184 18453
YP_006906883.1 NC_018846_p66 tail fibre adesine phrog_1121 tail fiber adhesin tail 1 42978 43490
YP_006906827.1 NC_018846_p10 antirepressor antB phrog_377 anti-repressor Ant transcription regulation -1 4009 4647
YP_006906863.1 NC_018846_p46 hypothetical protein phrog_31368 unknown function unknown function -1 25517 25639
YP_006906823.1 NC_018846_p6 hypothetical protein phrog_292 unknown function unknown function -1 2727 3023
YP_006906852.1 NC_018846_p35 hypothetical protein phrog_1347 unknown function unknown function 1 18661 19038