Genomic map of Propionibacterium phage ATCC29399B_T (NC_018847)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018847
Definition
Propionibacterium phage ATCC29399B_T, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29516
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
54
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006906939.1 NC_018847_p43 hypothetical protein phrog_919 unknown function unknown function -1 26537 26845
YP_006906913.1 NC_018847_p17 minor tail protein phrog_1910 lectin other 1 13409 14227
YP_006906926.1 NC_018847_p30 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20653 21324
YP_006906929.1 NC_018847_p33 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21878 22741
YP_006906937.1 NC_018847_p41 hypothetical protein phrog_1908 unknown function unknown function -1 25532 26116
YP_006906921.1 NC_018847_p25 hypothetical protein phrog_1340 unknown function unknown function -1 17934 18254
YP_006906911.1 NC_018847_p15 minor tail protein phrog_106 minor tail protein tail 1 11281 12228
YP_006906909.1 NC_018847_p13 tail assembly chaperone phrog_1927 tail assembly chaperone tail 1 7809 8105
YP_006906903.1 NC_018847_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5613 6092
YP_006906942.1 NC_018847_p46 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29152 29454
YP_006906898.1 NC_018847_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 385 1896
YP_006906910.1 NC_018847_p14 tape measure phrog_58 tail length tape measure protein tail 1 8499 11264
YP_006906933.1 NC_018847_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24636 24986
YP_006906908.1 NC_018847_p12 tail assembly chaperone phrog_4075 tail assembly chaperone tail 1 7809 8491
YP_006906914.1 NC_018847_p18 minor tail protein phrog_1958 minor tail protein tail 1 14278 14535
YP_006906907.1 NC_018847_p11 major tail subunit phrog_117 major tail protein tail 1 7147 7782
YP_006906924.1 NC_018847_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19489 20049
YP_006906941.1 NC_018847_p45 hypothetical protein phrog_5628 unknown function unknown function 1 28849 29133
YP_006906922.1 NC_018847_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18265 19311
YP_006906936.1 NC_018847_p40 hypothetical protein phrog_1884 unknown function unknown function -1 25288 25515
YP_006906920.1 NC_018847_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17636 17920
YP_006906919.1 NC_018847_p23 hypothetical protein phrog_1729 unknown function unknown function -1 17246 17632
YP_006906923.1 NC_018847_p27 hypothetical protein phrog_1923 unknown function unknown function -1 19308 19505
YP_006906928.1 NC_018847_p32 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21522 21878
YP_006906918.1 NC_018847_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16755 17240
YP_006906932.1 NC_018847_p36 hypothetical protein phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23693 24634
YP_006906897.1 NC_018847_p1 terminase small subunit phrog_1897 terminase small subunit head and packaging 1 57 380
YP_006906917.1 NC_018847_p21 holin phrog_443 holin lysis 1 16265 16663
YP_006906925.1 NC_018847_p29 hypothetical protein phrog_1881 unknown function unknown function -1 20046 20609
YP_006906935.1 NC_018847_p39 hypothetical protein phrog_1937 unknown function unknown function -1 25091 25291
YP_006906900.1 NC_018847_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3225 3980
YP_006906927.1 NC_018847_p31 hypothetical protein phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21161 21562
YP_006906915.1 NC_018847_p19 minor tail protein phrog_1806 collagen like minor tail tail 1 14535 15341
YP_006906906.1 NC_018847_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6735 7106
YP_006906902.1 NC_018847_p6 capsid phrog_10 major head protein head and packaging 1 4640 5587
YP_006906901.1 NC_018847_p5 head assembly scaffold phrog_1879 head scaffolding protein head and packaging 1 4085 4633
YP_006906934.1 NC_018847_p38 hypothetical protein phrog_4216 unknown function unknown function -1 25011 25094
YP_006906938.1 NC_018847_p42 hypothetical protein phrog_919 unknown function unknown function -1 26186 26497
YP_006906930.1 NC_018847_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22785 23243
YP_006906899.1 NC_018847_p3 portal phrog_104 portal protein head and packaging 1 1893 3218
YP_006906905.1 NC_018847_p9 hypothetical protein phrog_387 neck protein connector 1 6448 6738
YP_006906916.1 NC_018847_p20 endolysin phrog_670 endolysin lysis 1 15398 16252
YP_006906904.1 NC_018847_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6095 6442
YP_006906912.1 NC_018847_p16 minor tail protein phrog_110 minor tail protein tail 1 12235 13392
YP_006906940.1 NC_018847_p44 hypothetical protein phrog_28708 unknown function unknown function -1 27066 27170
YP_006906931.1 NC_018847_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23286 23696