| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018847 |
Definition |
Propionibacterium phage ATCC29399B_T, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29516 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
54 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006906939.1 | NC_018847_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26537 | 26845 |
| YP_006906913.1 | NC_018847_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13409 | 14227 |
| YP_006906926.1 | NC_018847_p30 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20653 | 21324 |
| YP_006906929.1 | NC_018847_p33 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21878 | 22741 |
| YP_006906937.1 | NC_018847_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25532 | 26116 |
| YP_006906921.1 | NC_018847_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17934 | 18254 |
| YP_006906911.1 | NC_018847_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11281 | 12228 |
| YP_006906909.1 | NC_018847_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7809 | 8105 |
| YP_006906903.1 | NC_018847_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5613 | 6092 |
| YP_006906942.1 | NC_018847_p46 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29152 | 29454 |
| YP_006906898.1 | NC_018847_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 385 | 1896 |
| YP_006906910.1 | NC_018847_p14 | tape measure | phrog_58 | tail length tape measure protein | tail | 1 | 8499 | 11264 |
| YP_006906933.1 | NC_018847_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24636 | 24986 |
| YP_006906908.1 | NC_018847_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7809 | 8491 |
| YP_006906914.1 | NC_018847_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14278 | 14535 |
| YP_006906907.1 | NC_018847_p11 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 7147 | 7782 |
| YP_006906924.1 | NC_018847_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19489 | 20049 |
| YP_006906941.1 | NC_018847_p45 | hypothetical protein | phrog_5628 | unknown function | unknown function | 1 | 28849 | 29133 |
| YP_006906922.1 | NC_018847_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18265 | 19311 |
| YP_006906936.1 | NC_018847_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25288 | 25515 |
| YP_006906920.1 | NC_018847_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17636 | 17920 |
| YP_006906919.1 | NC_018847_p23 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17246 | 17632 |
| YP_006906923.1 | NC_018847_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19308 | 19505 |
| YP_006906928.1 | NC_018847_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21522 | 21878 |
| YP_006906918.1 | NC_018847_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16755 | 17240 |
| YP_006906932.1 | NC_018847_p36 | hypothetical protein | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23693 | 24634 |
| YP_006906897.1 | NC_018847_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 57 | 380 |
| YP_006906917.1 | NC_018847_p21 | holin | phrog_443 | holin | lysis | 1 | 16265 | 16663 |
| YP_006906925.1 | NC_018847_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20046 | 20609 |
| YP_006906935.1 | NC_018847_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25091 | 25291 |
| YP_006906900.1 | NC_018847_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3225 | 3980 |
| YP_006906927.1 | NC_018847_p31 | hypothetical protein | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21161 | 21562 |
| YP_006906915.1 | NC_018847_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14535 | 15341 |
| YP_006906906.1 | NC_018847_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6735 | 7106 |
| YP_006906902.1 | NC_018847_p6 | capsid | phrog_10 | major head protein | head and packaging | 1 | 4640 | 5587 |
| YP_006906901.1 | NC_018847_p5 | head assembly scaffold | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4085 | 4633 |
| YP_006906934.1 | NC_018847_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 25011 | 25094 |
| YP_006906938.1 | NC_018847_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26186 | 26497 |
| YP_006906930.1 | NC_018847_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22785 | 23243 |
| YP_006906899.1 | NC_018847_p3 | portal | phrog_104 | portal protein | head and packaging | 1 | 1893 | 3218 |
| YP_006906905.1 | NC_018847_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6448 | 6738 |
| YP_006906916.1 | NC_018847_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15398 | 16252 |
| YP_006906904.1 | NC_018847_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6095 | 6442 |
| YP_006906912.1 | NC_018847_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12235 | 13392 |
| YP_006906940.1 | NC_018847_p44 | hypothetical protein | phrog_28708 | unknown function | unknown function | -1 | 27066 | 27170 |
| YP_006906931.1 | NC_018847_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23286 | 23696 |