Genomic map of Streptomyces phage SV1 (NC_018848)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018848
Definition
Streptomyces phage SV1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Picardvirus; unclassified Picardvirus.
DB of origin
REFSEQ
Length
37612
Host Name
Streptomyces venezuelae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
72.69
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006906994.1 NC_018848_p52 hypothetical protein phrog_14382 unknown function unknown function 1 34007 35269
YP_006906946.1 NC_018848_p4 head assembly protein phrog_12049 head morphogenesis head and packaging 1 2988 4985
YP_006906967.1 NC_018848_p25 regulatory protein, ATPase phrog_12354 transcriptional regulator transcription regulation 1 19341 19814
YP_006906966.1 NC_018848_p24 transcriptional regulator phrog_10886 transcriptional regulator transcription regulation -1 17910 19259
YP_006906978.1 NC_018848_p36 hypothetical protein phrog_26351 unknown function unknown function 1 26573 26809
YP_006906954.1 NC_018848_p12 hypothetical protein phrog_2595 head-tail connector protein connector 1 8384 8800
YP_006906977.1 NC_018848_p35 hypothetical protein phrog_11955 unknown function unknown function 1 25947 26576
YP_006906974.1 NC_018848_p32 hypothetical protein phrog_11833 unknown function unknown function 1 23901 24287
YP_006906957.1 NC_018848_p15 tail chaperone protein singleton unknown function unknown function 1 9899 10015
YP_006906943.1 NC_018848_p1 large terminase phrog_2 terminase large subunit head and packaging 1 1 1263
YP_006906971.1 NC_018848_p29 hypothetical protein phrog_3949 transcriptional repressor transcription regulation -1 22711 23178
YP_006906976.1 NC_018848_p34 DNA repair protein, Rad52/Rad22 superfamily phrog_26464 DNA repair protein DNA, RNA and nucleotide metabolism 1 24814 25950
YP_006906993.1 NC_018848_p51 hypothetical protein singleton unknown function unknown function -1 33863 33994
YP_006906972.1 NC_018848_p30 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 23439 23657
YP_006906944.1 NC_018848_p2 hypothetical protein phrog_27842 unknown function unknown function 1 1272 1496
YP_006906970.1 NC_018848_p28 hypothetical protein phrog_12722 unknown function unknown function -1 22291 22683
YP_006906969.1 NC_018848_p27 recombinase, serine integrase family phrog_95 integrase integration and excision -1 20651 22294
YP_006906982.1 NC_018848_p40 hypothetical protein phrog_17447 unknown function unknown function 1 28800 29363
YP_006906955.1 NC_018848_p13 hypothetical protein phrog_3884 major tail protein tail 1 8813 9283
YP_006906965.1 NC_018848_p23 hypothetical protein phrog_5225 unknown function unknown function 1 17585 17851
YP_006906958.1 NC_018848_p16 tail tape measure protein phrog_28 tail length tape measure protein tail 1 10022 12439
YP_006906988.1 NC_018848_p46 hypothetical protein singleton unknown function unknown function 1 31525 31791
YP_006906975.1 NC_018848_p33 hypothetical protein phrog_11881 unknown function unknown function 1 24284 24817
YP_006906968.1 NC_018848_p26 hypothetical protein phrog_12213 unknown function unknown function 1 19811 20308
YP_006906996.1 NC_018848_p54 hypothetical protein phrog_16946 unknown function unknown function 1 36332 36841
YP_006906953.1 NC_018848_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 8041 8391
YP_006906964.1 NC_018848_p22 hypothetical protein phrog_4316 unknown function unknown function 1 17352 17588
YP_006906945.1 NC_018848_p3 portal protein phrog_533 portal protein head and packaging 1 1493 2971
YP_006906980.1 NC_018848_p38 DNA binding protein phrog_6643 replication initiation protein DNA, RNA and nucleotide metabolism 1 27169 28065
YP_006906981.1 NC_018848_p39 hypothetical protein phrog_8924 unknown function unknown function 1 28072 28803
YP_006906947.1 NC_018848_p5 hypothetical protein phrog_13106 unknown function unknown function 1 4991 5155
YP_006906989.1 NC_018848_p47 hypothetical protein phrog_13085 unknown function unknown function 1 31788 32567
YP_006906986.1 NC_018848_p44 hypothetical protein phrog_18645 unknown function unknown function 1 30720 31391
YP_006906959.1 NC_018848_p17 hypothetical protein phrog_5577 minor tail protein tail 1 12442 13338
YP_006906987.1 NC_018848_p45 hypothetical protein phrog_25170 unknown function unknown function 1 31388 31528
YP_006906997.1 NC_018848_p55 hypothetical protein phrog_5536 unknown function unknown function 1 37076 37609
YP_006906948.1 NC_018848_p6 hypothetical protein phrog_8952 unknown function unknown function 1 5267 6019
YP_006906995.1 NC_018848_p53 hypothetical protein phrog_21202 unknown function unknown function 1 35334 36248
YP_006906990.1 NC_018848_p48 hypothetical protein singleton unknown function unknown function 1 32564 32737
YP_006906984.1 NC_018848_p42 HNH endonuclease phrog_826 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29657 30169
YP_006906979.1 NC_018848_p37 hypothetical protein phrog_25823 unknown function unknown function 1 26876 27172
YP_006906960.1 NC_018848_p18 hypothetical protein phrog_3398 virion structural protein head and packaging 1 13354 14436
YP_006906950.1 NC_018848_p8 hypothetical protein phrog_15682 unknown function unknown function 1 7066 7308
YP_006906962.1 NC_018848_p20 hypothetical protein phrog_9849 unknown function unknown function 1 15575 16297
YP_006906963.1 NC_018848_p21 endolysin phrog_880 endolysin lysis 1 16368 17315
YP_006906952.1 NC_018848_p10 hypothetical protein phrog_3881 head-tail connector protein connector 1 7724 8044
YP_006906973.1 NC_018848_p31 hypothetical protein phrog_13097 unknown function unknown function 1 23654 23839
YP_006906992.1 NC_018848_p50 hypothetical protein phrog_7575 unknown function unknown function 1 32958 33791
YP_006906956.1 NC_018848_p14 tail chaperone protein phrog_6959 tail assembly chaperone tail 1 9280 9765
YP_006906985.1 NC_018848_p43 single-stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 30169 30636
YP_006906949.1 NC_018848_p7 major capsid protein phrog_212 major head protein head and packaging 1 6041 7045
YP_006906991.1 NC_018848_p49 hypothetical protein phrog_25474 unknown function unknown function 1 32734 32961
YP_006906951.1 NC_018848_p9 hypothetical protein phrog_541 head-tail adaptor connector 1 7311 7727
YP_006906961.1 NC_018848_p19 major tail protein phrog_1885 minor tail protein tail 1 14433 15563
YP_006906983.1 NC_018848_p41 hypothetical protein phrog_12895 unknown function unknown function 1 29360 29527