Genomic map of Pseudomonas phage UFV-P2 (NC_018850)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018850
Definition
Pseudomonas phage UFV-P2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Vicosavirus; Pseudomonas virus UFVP2.
DB of origin
REFSEQ
Length
45517
Host Name
Pseudomonas fluorescens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
51.47
Number of singletons
15
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006907043.1 NC_018850_p75 terminase small subunit phrog_51 terminase small subunit head and packaging -1 44372 44845
YP_007518487.1 NC_018850_p52 hypothetical protein singleton unknown function unknown function 1 25059 25184
YP_006907060.1 NC_018850_p57 phage structural protein phrog_8295 virion structural protein head and packaging -1 26321 27208
YP_006907064.1 NC_018850_p49 hypothetical protein phrog_7967 unknown function unknown function 1 23078 24073
YP_006907077.2 NC_018850_p22 hypothetical protein phrog_4877 unknown function unknown function 1 8965 9525
YP_007518478.1 NC_018850_p36 hypothetical protein phrog_12255 unknown function unknown function 1 17336 17539
YP_007518481.1 NC_018850_p39 hypothetical protein singleton unknown function unknown function 1 18069 18263
YP_006907071.2 NC_018850_p31 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 14425 16176
YP_006907053.1 NC_018850_p64 phage particle protein phrog_3287 virion structural protein head and packaging -1 34570 36111
YP_006907045.1 NC_018850_p73 terminase large subunit phrog_2 terminase large subunit head and packaging -1 42496 43941
YP_007518472.1 NC_018850_p26 hypothetical protein phrog_9335 unknown function unknown function 1 12547 12765
YP_007518489.1 NC_018850_p54 hypothetical protein singleton unknown function unknown function 1 25455 25631
YP_007518466.1 NC_018850_p11 hypothetical protein phrog_28276 unknown function unknown function 1 3555 3869
YP_007518470.1 NC_018850_p18 hypothetical protein phrog_22235 unknown function unknown function 1 6159 6374
YP_006907049.2 NC_018850_p68 hypothetical protein phrog_3982 unknown function unknown function -1 37808 38128
YP_006907082.2 NC_018850_p2 hypothetical protein phrog_1448 unknown function unknown function 1 1501 1983
YP_006907058.1 NC_018850_p59 phage structural protein phrog_7725 virion structural protein head and packaging -1 30389 32101
YP_007518475.1 NC_018850_p33 hypothetical protein phrog_11010 unknown function unknown function 1 16669 16920
YP_006907055.2 NC_018850_p62 hypothetical protein phrog_7642 unknown function unknown function -1 33429 33863
YP_007518482.1 NC_018850_p40 hypothetical protein phrog_9123 unknown function unknown function 1 18263 18433
YP_007518480.1 NC_018850_p38 hypothetical protein phrog_15498 membrane protein moron, auxiliary metabolic gene and host takeover 1 17814 18032
YP_007518471.1 NC_018850_p19 hypothetical protein phrog_29805 unknown function unknown function 1 6441 7289
YP_006907057.1 NC_018850_p60 phage structural protein phrog_9927 virion structural protein head and packaging -1 32103 32507
YP_006907051.2 NC_018850_p66 hypothetical protein phrog_402 unknown function unknown function -1 36976 37170
YP_007518483.1 NC_018850_p41 hypothetical protein singleton unknown function unknown function 1 18433 18627
YP_007518458.1 NC_018850_p3 hypothetical protein singleton unknown function unknown function 1 2046 2216
YP_006907068.1 NC_018850_p44 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 20472 21068
YP_006907074.1 NC_018850_p25 glutamine amidotransferase phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other 1 11084 12544
YP_007518463.1 NC_018850_p8 hypothetical protein phrog_16829 unknown function unknown function 1 2898 3020
YP_006907075.2 NC_018850_p24 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 10667 11071
YP_007518462.1 NC_018850_p7 hypothetical protein phrog_38448 unknown function unknown function 1 2677 2898
YP_007641362.1 NC_018850_p71 hypothetical protein phrog_8161 unknown function unknown function -1 40128 40379
YP_007518474.1 NC_018850_p30 hypothetical protein phrog_8197 unknown function unknown function 1 14169 14465
YP_007641361.1 NC_018850_p14 hypothetical protein singleton unknown function unknown function 1 4539 4736
YP_007518469.1 NC_018850_p17 hypothetical protein singleton unknown function unknown function 1 6021 6149
YP_006907059.1 NC_018850_p58 phage structural protein phrog_6958 virion structural protein head and packaging -1 27219 30383
YP_007518476.1 NC_018850_p34 hypothetical protein singleton unknown function unknown function 1 16931 17068
YP_006907081.1 NC_018850_p13 hypothetical protein phrog_8299 unknown function unknown function 1 4060 4458
YP_006907062.1 NC_018850_p51 hypothetical protein phrog_221 metallo-phosphoesterase other 1 24307 25062
YP_006907056.1 NC_018850_p61 phage particle protein phrog_7477 unknown function unknown function -1 32504 33448
YP_006907083.2 NC_018850_p1 hypothetical protein phrog_14276 unknown function unknown function 1 1205 1483
YP_006907072.2 NC_018850_p29 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover 1 13774 14169
YP_006907078.1 NC_018850_p21 hypothetical protein phrog_3815 COOH.NH2 ligase other 1 8171 8968
YP_007518460.1 NC_018850_p5 hypothetical protein singleton unknown function unknown function 1 2365 2556
YP_006907065.2 NC_018850_p48 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 22219 23103
YP_006907052.1 NC_018850_p65 tail fiber protein phrog_5795 tail protein tail -1 36119 36754
YP_006907079.1 NC_018850_p20 hypothetical protein phrog_7973 unknown function unknown function 1 7296 8159
YP_007518464.1 NC_018850_p9 hypothetical protein singleton unknown function unknown function 1 3021 3275
YP_006907067.2 NC_018850_p45 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis 1 21139 21495
YP_006907048.1 NC_018850_p69 major capsid protein phrog_1328 major head protein head and packaging -1 38180 39133
YP_007518465.1 NC_018850_p10 hypothetical protein phrog_32977 unknown function unknown function 1 3368 3568
YP_007518473.1 NC_018850_p27 hypothetical protein singleton unknown function unknown function 1 12805 12909
YP_006907061.1 NC_018850_p56 hypothetical protein phrog_8259 unknown function unknown function -1 25963 26319
YP_006907069.2 NC_018850_p43 DNA polymerase part II phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 18765 20405
YP_006907050.1 NC_018850_p67 phage structural protein phrog_2941 virion structural protein head and packaging -1 37175 37804
YP_007518479.1 NC_018850_p37 holin phrog_7045 holin lysis 1 17536 17817
YP_007518477.1 NC_018850_p35 hypothetical protein phrog_30502 unknown function unknown function 1 17095 17325
YP_006907054.2 NC_018850_p63 hypothetical protein phrog_8092 unknown function unknown function -1 33860 34570
YP_006907046.2 NC_018850_p72 portal protein phrog_1216 portal protein head and packaging -1 40379 42469
YP_006907076.1 NC_018850_p23 amidoligase phrog_7631 amidoligase enzyme other 1 9501 10658
YP_007518484.1 NC_018850_p42 hypothetical protein singleton unknown function unknown function 1 18630 18764
YP_006907063.2 NC_018850_p50 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 23874 24341
YP_007518488.1 NC_018850_p53 hypothetical protein singleton unknown function unknown function 1 25255 25458
YP_007518468.1 NC_018850_p16 hypothetical protein phrog_27008 unknown function unknown function 1 5727 6017
YP_007518467.1 NC_018850_p12 hypothetical protein phrog_33429 unknown function unknown function 1 3869 4063
YP_006907070.2 NC_018850_p32 DNA polymerase part I phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16151 16666
YP_007518459.1 NC_018850_p4 hypothetical protein singleton unknown function unknown function 1 2231 2368
YP_007518486.1 NC_018850_p47 hypothetical protein phrog_29759 unknown function unknown function 1 21887 22222
YP_006907047.1 NC_018850_p70 scaffolding protein phrog_3927 head scaffolding protein head and packaging -1 39152 40138
YP_007518490.1 NC_018850_p55 hypothetical protein phrog_8402 unknown function unknown function 1 25628 25834
YP_006907080.2 NC_018850_p15 hypothetical protein phrog_200 lipoprotein other 1 4884 5714
YP_006907044.2 NC_018850_p74 lysozyme phrog_7 endolysin lysis -1 43945 44451
YP_006907073.1 NC_018850_p28 ATP-grasp enzyme phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover 1 12906 13781
YP_007518461.1 NC_018850_p6 hypothetical protein singleton unknown function unknown function 1 2553 2687
YP_007518485.1 NC_018850_p46 hypothetical protein phrog_31293 unknown function unknown function 1 21525 21755