| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018850 |
Definition |
Pseudomonas phage UFV-P2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Vicosavirus; Pseudomonas virus UFVP2. |
DB of origin |
REFSEQ |
Length |
45517 |
Host Name |
Pseudomonas fluorescens |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
51.47 |
Number of singletons |
15 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006907043.1 | NC_018850_p75 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | -1 | 44372 | 44845 |
| YP_007518487.1 | NC_018850_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25059 | 25184 |
| YP_006907060.1 | NC_018850_p57 | phage structural protein | phrog_8295 | virion structural protein | head and packaging | -1 | 26321 | 27208 |
| YP_006907064.1 | NC_018850_p49 | hypothetical protein | phrog_7967 | unknown function | unknown function | 1 | 23078 | 24073 |
| YP_006907077.2 | NC_018850_p22 | hypothetical protein | phrog_4877 | unknown function | unknown function | 1 | 8965 | 9525 |
| YP_007518478.1 | NC_018850_p36 | hypothetical protein | phrog_12255 | unknown function | unknown function | 1 | 17336 | 17539 |
| YP_007518481.1 | NC_018850_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18069 | 18263 |
| YP_006907071.2 | NC_018850_p31 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 14425 | 16176 |
| YP_006907053.1 | NC_018850_p64 | phage particle protein | phrog_3287 | virion structural protein | head and packaging | -1 | 34570 | 36111 |
| YP_006907045.1 | NC_018850_p73 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 42496 | 43941 |
| YP_007518472.1 | NC_018850_p26 | hypothetical protein | phrog_9335 | unknown function | unknown function | 1 | 12547 | 12765 |
| YP_007518489.1 | NC_018850_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25455 | 25631 |
| YP_007518466.1 | NC_018850_p11 | hypothetical protein | phrog_28276 | unknown function | unknown function | 1 | 3555 | 3869 |
| YP_007518470.1 | NC_018850_p18 | hypothetical protein | phrog_22235 | unknown function | unknown function | 1 | 6159 | 6374 |
| YP_006907049.2 | NC_018850_p68 | hypothetical protein | phrog_3982 | unknown function | unknown function | -1 | 37808 | 38128 |
| YP_006907082.2 | NC_018850_p2 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 1501 | 1983 |
| YP_006907058.1 | NC_018850_p59 | phage structural protein | phrog_7725 | virion structural protein | head and packaging | -1 | 30389 | 32101 |
| YP_007518475.1 | NC_018850_p33 | hypothetical protein | phrog_11010 | unknown function | unknown function | 1 | 16669 | 16920 |
| YP_006907055.2 | NC_018850_p62 | hypothetical protein | phrog_7642 | unknown function | unknown function | -1 | 33429 | 33863 |
| YP_007518482.1 | NC_018850_p40 | hypothetical protein | phrog_9123 | unknown function | unknown function | 1 | 18263 | 18433 |
| YP_007518480.1 | NC_018850_p38 | hypothetical protein | phrog_15498 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 17814 | 18032 |
| YP_007518471.1 | NC_018850_p19 | hypothetical protein | phrog_29805 | unknown function | unknown function | 1 | 6441 | 7289 |
| YP_006907057.1 | NC_018850_p60 | phage structural protein | phrog_9927 | virion structural protein | head and packaging | -1 | 32103 | 32507 |
| YP_006907051.2 | NC_018850_p66 | hypothetical protein | phrog_402 | unknown function | unknown function | -1 | 36976 | 37170 |
| YP_007518483.1 | NC_018850_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18433 | 18627 |
| YP_007518458.1 | NC_018850_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2046 | 2216 |
| YP_006907068.1 | NC_018850_p44 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 20472 | 21068 |
| YP_006907074.1 | NC_018850_p25 | glutamine amidotransferase | phrog_4736 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | 1 | 11084 | 12544 |
| YP_007518463.1 | NC_018850_p8 | hypothetical protein | phrog_16829 | unknown function | unknown function | 1 | 2898 | 3020 |
| YP_006907075.2 | NC_018850_p24 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10667 | 11071 |
| YP_007518462.1 | NC_018850_p7 | hypothetical protein | phrog_38448 | unknown function | unknown function | 1 | 2677 | 2898 |
| YP_007641362.1 | NC_018850_p71 | hypothetical protein | phrog_8161 | unknown function | unknown function | -1 | 40128 | 40379 |
| YP_007518474.1 | NC_018850_p30 | hypothetical protein | phrog_8197 | unknown function | unknown function | 1 | 14169 | 14465 |
| YP_007641361.1 | NC_018850_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4539 | 4736 |
| YP_007518469.1 | NC_018850_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6021 | 6149 |
| YP_006907059.1 | NC_018850_p58 | phage structural protein | phrog_6958 | virion structural protein | head and packaging | -1 | 27219 | 30383 |
| YP_007518476.1 | NC_018850_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16931 | 17068 |
| YP_006907081.1 | NC_018850_p13 | hypothetical protein | phrog_8299 | unknown function | unknown function | 1 | 4060 | 4458 |
| YP_006907062.1 | NC_018850_p51 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 24307 | 25062 |
| YP_006907056.1 | NC_018850_p61 | phage particle protein | phrog_7477 | unknown function | unknown function | -1 | 32504 | 33448 |
| YP_006907083.2 | NC_018850_p1 | hypothetical protein | phrog_14276 | unknown function | unknown function | 1 | 1205 | 1483 |
| YP_006907072.2 | NC_018850_p29 | hypothetical protein | phrog_2520 | gamma-glutamyl cyclotransferase | moron, auxiliary metabolic gene and host takeover | 1 | 13774 | 14169 |
| YP_006907078.1 | NC_018850_p21 | hypothetical protein | phrog_3815 | COOH.NH2 ligase | other | 1 | 8171 | 8968 |
| YP_007518460.1 | NC_018850_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2365 | 2556 |
| YP_006907065.2 | NC_018850_p48 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 22219 | 23103 |
| YP_006907052.1 | NC_018850_p65 | tail fiber protein | phrog_5795 | tail protein | tail | -1 | 36119 | 36754 |
| YP_006907079.1 | NC_018850_p20 | hypothetical protein | phrog_7973 | unknown function | unknown function | 1 | 7296 | 8159 |
| YP_007518464.1 | NC_018850_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3021 | 3275 |
| YP_006907067.2 | NC_018850_p45 | hypothetical protein | phrog_5033 | endolysin; inhibits RNA polymerase | lysis | 1 | 21139 | 21495 |
| YP_006907048.1 | NC_018850_p69 | major capsid protein | phrog_1328 | major head protein | head and packaging | -1 | 38180 | 39133 |
| YP_007518465.1 | NC_018850_p10 | hypothetical protein | phrog_32977 | unknown function | unknown function | 1 | 3368 | 3568 |
| YP_007518473.1 | NC_018850_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12805 | 12909 |
| YP_006907061.1 | NC_018850_p56 | hypothetical protein | phrog_8259 | unknown function | unknown function | -1 | 25963 | 26319 |
| YP_006907069.2 | NC_018850_p43 | DNA polymerase part II | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18765 | 20405 |
| YP_006907050.1 | NC_018850_p67 | phage structural protein | phrog_2941 | virion structural protein | head and packaging | -1 | 37175 | 37804 |
| YP_007518479.1 | NC_018850_p37 | holin | phrog_7045 | holin | lysis | 1 | 17536 | 17817 |
| YP_007518477.1 | NC_018850_p35 | hypothetical protein | phrog_30502 | unknown function | unknown function | 1 | 17095 | 17325 |
| YP_006907054.2 | NC_018850_p63 | hypothetical protein | phrog_8092 | unknown function | unknown function | -1 | 33860 | 34570 |
| YP_006907046.2 | NC_018850_p72 | portal protein | phrog_1216 | portal protein | head and packaging | -1 | 40379 | 42469 |
| YP_006907076.1 | NC_018850_p23 | amidoligase | phrog_7631 | amidoligase enzyme | other | 1 | 9501 | 10658 |
| YP_007518484.1 | NC_018850_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18630 | 18764 |
| YP_006907063.2 | NC_018850_p50 | endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 23874 | 24341 |
| YP_007518488.1 | NC_018850_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25255 | 25458 |
| YP_007518468.1 | NC_018850_p16 | hypothetical protein | phrog_27008 | unknown function | unknown function | 1 | 5727 | 6017 |
| YP_007518467.1 | NC_018850_p12 | hypothetical protein | phrog_33429 | unknown function | unknown function | 1 | 3869 | 4063 |
| YP_006907070.2 | NC_018850_p32 | DNA polymerase part I | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 16151 | 16666 |
| YP_007518459.1 | NC_018850_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2231 | 2368 |
| YP_007518486.1 | NC_018850_p47 | hypothetical protein | phrog_29759 | unknown function | unknown function | 1 | 21887 | 22222 |
| YP_006907047.1 | NC_018850_p70 | scaffolding protein | phrog_3927 | head scaffolding protein | head and packaging | -1 | 39152 | 40138 |
| YP_007518490.1 | NC_018850_p55 | hypothetical protein | phrog_8402 | unknown function | unknown function | 1 | 25628 | 25834 |
| YP_006907080.2 | NC_018850_p15 | hypothetical protein | phrog_200 | lipoprotein | other | 1 | 4884 | 5714 |
| YP_006907044.2 | NC_018850_p74 | lysozyme | phrog_7 | endolysin | lysis | -1 | 43945 | 44451 |
| YP_006907073.1 | NC_018850_p28 | ATP-grasp enzyme | phrog_2599 | ribosomal protein S6 glutaminyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 12906 | 13781 |
| YP_007518461.1 | NC_018850_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2553 | 2687 |
| YP_007518485.1 | NC_018850_p46 | hypothetical protein | phrog_31293 | unknown function | unknown function | 1 | 21525 | 21755 |