Genomic map of Propionibacterium phage ATCC29399B_C (NC_018851)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018851
Definition
Propionibacterium phage ATCC29399B_C, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29516
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
53.99
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006907096.1 NC_018851_p13 tail assembly chaperone phrog_1927 tail assembly chaperone tail 1 7812 8108
YP_006907127.1 NC_018851_p44 hypothetical protein phrog_28708 unknown function unknown function -1 27066 27170
YP_006907084.1 NC_018851_p1 terminase small subunit phrog_1897 terminase small subunit head and packaging 1 2 373
YP_006907129.1 NC_018851_p46 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29152 29454
YP_006907098.1 NC_018851_p15 minor tail protein phrog_106 minor tail protein tail 1 11283 12224
YP_006907110.1 NC_018851_p27 hypothetical protein phrog_1923 unknown function unknown function -1 19308 19505
YP_006907101.1 NC_018851_p18 minor tail protein phrog_1958 minor tail protein tail 1 14278 14535
YP_006907102.1 NC_018851_p19 minor tail protein phrog_1806 collagen like minor tail tail 1 14535 15341
YP_006907105.1 NC_018851_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16755 17240
YP_006907090.1 NC_018851_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5617 6096
YP_006907118.1 NC_018851_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23286 23696
YP_006907122.1 NC_018851_p39 hypothetical protein phrog_1937 unknown function unknown function -1 25091 25291
YP_006907107.1 NC_018851_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17636 17920
YP_006907100.1 NC_018851_p17 minor tail protein phrog_1910 lectin other 1 13409 14227
YP_006907111.1 NC_018851_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19489 20049
YP_006907117.1 NC_018851_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22785 23243
YP_006907109.1 NC_018851_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18265 19311
YP_006907087.1 NC_018851_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3218 3973
YP_006907108.1 NC_018851_p25 hypothetical protein phrog_1340 unknown function unknown function -1 17934 18254
YP_006907104.1 NC_018851_p21 holin phrog_443 holin lysis 1 16265 16663
YP_006907119.1 NC_018851_p36 hypothetical protein phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23693 24634
YP_006907106.1 NC_018851_p23 hypothetical protein phrog_1729 unknown function unknown function -1 17246 17632
YP_006907085.1 NC_018851_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 378 1889
YP_006907089.1 NC_018851_p6 capsid phrog_10 major head protein head and packaging 1 4644 5591
YP_006907099.1 NC_018851_p16 minor tail protein phrog_110 minor tail protein tail 1 12232 13389
YP_006907088.1 NC_018851_p5 head assembly scaffold phrog_1879 head scaffolding protein head and packaging 1 4077 4637
YP_006907123.1 NC_018851_p40 hypothetical protein phrog_1884 unknown function unknown function -1 25288 25515
YP_006907114.1 NC_018851_p31 hypothetical protein phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21161 21562
YP_006907120.1 NC_018851_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24636 24986
YP_006907124.1 NC_018851_p41 hypothetical protein phrog_1908 unknown function unknown function -1 25532 26116
YP_006907095.1 NC_018851_p12 tail assembly chaperone phrog_4075 tail assembly chaperone tail 1 7812 8494
YP_006907121.1 NC_018851_p38 hypothetical protein phrog_4216 unknown function unknown function -1 25011 25094
YP_006907113.1 NC_018851_p30 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20653 21324
YP_006907126.1 NC_018851_p43 hypothetical protein phrog_919 unknown function unknown function -1 26537 26845
YP_006907128.1 NC_018851_p45 hypothetical protein phrog_5628 unknown function unknown function 1 28849 29133
YP_006907094.1 NC_018851_p11 major tail subunit phrog_117 major tail protein tail 1 7150 7785
YP_006907091.1 NC_018851_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6098 6445
YP_006907097.1 NC_018851_p14 tape measure phrog_58 tail length tape measure protein tail 1 8502 11267
YP_006907125.1 NC_018851_p42 hypothetical protein phrog_919 unknown function unknown function -1 26186 26497
YP_006907116.1 NC_018851_p33 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21878 22741
YP_006907093.1 NC_018851_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6739 7110
YP_006907092.1 NC_018851_p9 hypothetical protein phrog_387 neck protein connector 1 6452 6742
YP_006907086.1 NC_018851_p3 portal phrog_104 portal protein head and packaging 1 1886 3211
YP_006907112.1 NC_018851_p29 hypothetical protein phrog_1881 unknown function unknown function -1 20046 20609
YP_006907103.1 NC_018851_p20 endolysiin phrog_670 endolysin lysis 1 15398 16252
YP_006907115.1 NC_018851_p32 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21522 21881