Genomic map of Propionibacterium phage P100D (NC_018852)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018852
Definition
Propionibacterium phage P100D, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
29506
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
53.76
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006907171.1 NC_018852_p42 hypothetical protein phrog_919 unknown function unknown function -1 26229 26540
YP_006907176.1 NC_018852_p47 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29142 29444
YP_006907161.1 NC_018852_p32 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21550 21906
YP_006907144.1 NC_018852_p15 minor tail protein phrog_106 minor tail protein tail 1 11296 12237
YP_006907151.1 NC_018852_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16729 17244
YP_006907155.1 NC_018852_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18281 19327
YP_006907153.1 NC_018852_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17651 17935
YP_006907139.1 NC_018852_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6734 7105
YP_006907163.1 NC_018852_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22811 23278
YP_006907173.1 NC_018852_p44 hypothetical protein phrog_26952 unknown function unknown function -1 27113 27295
YP_006907152.1 NC_018852_p23 hypothetical protein phrog_1729 unknown function unknown function -1 17249 17647
YP_006907135.1 NC_018852_p6 capsid phrog_10 major head protein head and packaging 1 4639 5586
YP_006907172.1 NC_018852_p43 hypothetical protein phrog_919 unknown function unknown function -1 26580 26888
YP_006907157.1 NC_018852_p28 hypothetical protein phrog_2548 unknown function unknown function -1 19505 20065
YP_006907137.1 NC_018852_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6093 6440
YP_006907133.1 NC_018852_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3213 3968
YP_006907132.1 NC_018852_p3 portal phrog_104 portal protein head and packaging 1 1881 3206
YP_006907167.1 NC_018852_p38 hypothetical protein phrog_4216 unknown function unknown function -1 25046 25129
YP_006907174.1 NC_018852_p45 hypothetical protein phrog_14941 unknown function unknown function -1 27609 27845
YP_006907146.1 NC_018852_p17 minor tail protein phrog_1910 lectin other 1 13422 14240
YP_006907145.1 NC_018852_p16 minor tail protein phrog_110 minor tail protein tail 1 12245 13402
YP_006907158.1 NC_018852_p29 hypothetical protein phrog_1881 unknown function unknown function -1 20062 20628
YP_006907170.1 NC_018852_p41 hypothetical protein phrog_1908 unknown function unknown function -1 25575 26159
YP_006907131.1 NC_018852_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 373 1884
YP_006907138.1 NC_018852_p9 hypothetical protein phrog_387 neck protein connector 1 6447 6737
YP_006907159.1 NC_018852_p30 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20681 21352
YP_006907150.1 NC_018852_p21 holin phrog_443 holin lysis 1 16248 16646
YP_006907140.1 NC_018852_p11 major tail subunit phrog_117 major tail protein tail 1 7145 7798
YP_006907154.1 NC_018852_p25 hypothetical protein phrog_1340 unknown function unknown function -1 17950 18270
YP_006907143.1 NC_018852_p14 tape measure phrog_58 tail length tape measure protein tail 1 8515 11280
YP_006907130.1 NC_018852_p1 terminase small subunit phrog_1897 terminase small subunit head and packaging 1 2 373
YP_006907169.1 NC_018852_p40 hypothetical protein phrog_1884 unknown function unknown function -1 25323 25550
YP_006907134.1 NC_018852_p5 head assmebly scaffold phrog_1879 head scaffolding protein head and packaging 1 4078 4632
YP_006907162.1 NC_018852_p33 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21816 22769
YP_006907168.1 NC_018852_p39 hypothetical protein phrog_1937 unknown function unknown function -1 25126 25326
YP_006907149.1 NC_018852_p20 endolysin phrog_670 endolysin lysis 1 15381 16235
YP_006907160.1 NC_018852_p31 hypothetical protein phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21189 21590
YP_006907165.1 NC_018852_p36 hypothetical protein phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23720 24667
YP_006907142.1 NC_018852_p13 tail assembly chaperone phrog_1927 tail assembly chaperone tail 1 7825 8121
YP_006907136.1 NC_018852_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5612 6091
YP_006907148.1 NC_018852_p19 minor tail protein phrog_1806 collagen like minor tail tail 1 14551 15339
YP_006907147.1 NC_018852_p18 minor tail protein phrog_1958 minor tail protein tail 1 14285 14548
YP_006907164.1 NC_018852_p35 hypothetical protein phrog_1890 unknown function unknown function -1 23313 23723
YP_006907175.1 NC_018852_p46 hypothetical protein phrog_7333 unknown function unknown function 1 28957 29094
YP_006907141.1 NC_018852_p12 tail assembly chaperone phrog_4075 tail assembly chaperone tail 1 7825 8507
YP_006907156.1 NC_018852_p27 hypothetical protein phrog_1923 unknown function unknown function -1 19324 19521
YP_006907166.1 NC_018852_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24667 25020