| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018852 |
Definition |
Propionibacterium phage P100D, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29506 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
53.76 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006907171.1 | NC_018852_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26229 | 26540 |
| YP_006907176.1 | NC_018852_p47 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29142 | 29444 |
| YP_006907161.1 | NC_018852_p32 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21550 | 21906 |
| YP_006907144.1 | NC_018852_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11296 | 12237 |
| YP_006907151.1 | NC_018852_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16729 | 17244 |
| YP_006907155.1 | NC_018852_p26 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18281 | 19327 |
| YP_006907153.1 | NC_018852_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17651 | 17935 |
| YP_006907139.1 | NC_018852_p10 | hypothetical protein | phrog_1892 | minor tail protein | tail | 1 | 6734 | 7105 |
| YP_006907163.1 | NC_018852_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22811 | 23278 |
| YP_006907173.1 | NC_018852_p44 | hypothetical protein | phrog_26952 | unknown function | unknown function | -1 | 27113 | 27295 |
| YP_006907152.1 | NC_018852_p23 | hypothetical protein | phrog_1729 | unknown function | unknown function | -1 | 17249 | 17647 |
| YP_006907135.1 | NC_018852_p6 | capsid | phrog_10 | major head protein | head and packaging | 1 | 4639 | 5586 |
| YP_006907172.1 | NC_018852_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26580 | 26888 |
| YP_006907157.1 | NC_018852_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19505 | 20065 |
| YP_006907137.1 | NC_018852_p8 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 6093 | 6440 |
| YP_006907133.1 | NC_018852_p4 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 3213 | 3968 |
| YP_006907132.1 | NC_018852_p3 | portal | phrog_104 | portal protein | head and packaging | 1 | 1881 | 3206 |
| YP_006907167.1 | NC_018852_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 25046 | 25129 |
| YP_006907174.1 | NC_018852_p45 | hypothetical protein | phrog_14941 | unknown function | unknown function | -1 | 27609 | 27845 |
| YP_006907146.1 | NC_018852_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13422 | 14240 |
| YP_006907145.1 | NC_018852_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12245 | 13402 |
| YP_006907158.1 | NC_018852_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20062 | 20628 |
| YP_006907170.1 | NC_018852_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25575 | 26159 |
| YP_006907131.1 | NC_018852_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 373 | 1884 |
| YP_006907138.1 | NC_018852_p9 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 6447 | 6737 |
| YP_006907159.1 | NC_018852_p30 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20681 | 21352 |
| YP_006907150.1 | NC_018852_p21 | holin | phrog_443 | holin | lysis | 1 | 16248 | 16646 |
| YP_006907140.1 | NC_018852_p11 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 7145 | 7798 |
| YP_006907154.1 | NC_018852_p25 | hypothetical protein | phrog_1340 | unknown function | unknown function | -1 | 17950 | 18270 |
| YP_006907143.1 | NC_018852_p14 | tape measure | phrog_58 | tail length tape measure protein | tail | 1 | 8515 | 11280 |
| YP_006907130.1 | NC_018852_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 2 | 373 |
| YP_006907169.1 | NC_018852_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25323 | 25550 |
| YP_006907134.1 | NC_018852_p5 | head assmebly scaffold | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4078 | 4632 |
| YP_006907162.1 | NC_018852_p33 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21816 | 22769 |
| YP_006907168.1 | NC_018852_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25126 | 25326 |
| YP_006907149.1 | NC_018852_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 15381 | 16235 |
| YP_006907160.1 | NC_018852_p31 | hypothetical protein | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21189 | 21590 |
| YP_006907165.1 | NC_018852_p36 | hypothetical protein | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23720 | 24667 |
| YP_006907142.1 | NC_018852_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7825 | 8121 |
| YP_006907136.1 | NC_018852_p7 | hypothetical protein | phrog_1290 | head-tail adaptor | connector | 1 | 5612 | 6091 |
| YP_006907148.1 | NC_018852_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14551 | 15339 |
| YP_006907147.1 | NC_018852_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14285 | 14548 |
| YP_006907164.1 | NC_018852_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23313 | 23723 |
| YP_006907175.1 | NC_018852_p46 | hypothetical protein | phrog_7333 | unknown function | unknown function | 1 | 28957 | 29094 |
| YP_006907141.1 | NC_018852_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7825 | 8507 |
| YP_006907156.1 | NC_018852_p27 | hypothetical protein | phrog_1923 | unknown function | unknown function | -1 | 19324 | 19521 |
| YP_006907166.1 | NC_018852_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24667 | 25020 |