Genomic map of Streptomyce phage TG1 (NC_018853)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_018853
Definition
Streptomyce phage TG1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tigunavirus.
DB of origin
REFSEQ
Length
40474
Host Name
Streptomyces cattleya
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
64.64
Number of singletons
7
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006907211.1 NC_018853_p35 hypothetical protein phrog_22972 unknown function unknown function 1 30127 30423
YP_006907226.1 NC_018853_p50 hypothetical protein phrog_28723 unknown function unknown function 1 36465 36695
YP_006907187.1 NC_018853_p11 tail chaperone singleton unknown function unknown function 1 8027 8179
YP_006907182.1 NC_018853_p6 hypothetical protein phrog_22424 unknown function unknown function 1 5464 5832
YP_006907212.1 NC_018853_p36 terminator overlapping CIR singleton unknown function unknown function 1 30416 30613
YP_006907178.1 NC_018853_p2 large terminase phrog_9 terminase large subunit head and packaging 1 587 2161
YP_006907190.1 NC_018853_p14 phage promoter phrog_13571 virion structural protein head and packaging 1 11319 12302
YP_006907214.1 NC_018853_p38 hypothetical protein phrog_3641 unknown function unknown function 1 31372 31563
YP_006907207.1 NC_018853_p31 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 25848 27695
YP_006907217.1 NC_018853_p41 hypothetical protein phrog_34435 unknown function unknown function 1 32417 32617
YP_006907199.1 NC_018853_p23 hypothetical protein phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 20234 21076
YP_006907188.1 NC_018853_p12 tail tape measure protein phrog_28 tail length tape measure protein tail 1 8190 10379
YP_006907177.1 NC_018853_p1 small subunit terminase phrog_83 terminase small subunit head and packaging 1 134 577
YP_006907181.1 NC_018853_p5 major capsid phrog_10 major head protein head and packaging 1 4218 5384
YP_006907213.1 NC_018853_p37 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 30675 31379
YP_006907179.1 NC_018853_p3 portal protein phrog_12 portal protein head and packaging 1 2208 3587
YP_006907203.1 NC_018853_p27 hypothetical protein phrog_13282 unknown function unknown function 1 22410 22685
YP_006907193.1 NC_018853_p17 hypothetical protein phrog_3671 unknown function unknown function 1 14008 14298
YP_006907185.1 NC_018853_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7279 7710
YP_006907221.1 NC_018853_p45 spdB2-like protein phrog_25954 unknown function unknown function 1 35002 35694
YP_006907198.1 NC_018853_p22 Phage repressor phrog_19947 unknown function unknown function 1 17609 19930
YP_006907180.1 NC_018853_p4 prohead protease phrog_80 head maturation protease head and packaging 1 3571 4209
YP_006907194.1 NC_018853_p18 tail fiber protein phrog_14726 tail fiber protein tail 1 14295 15701
YP_006907189.1 NC_018853_p13 hypothetical protein phrog_33 distal tail protein Dit tail 1 10453 11319
YP_006907200.1 NC_018853_p24 hypothetical protein phrog_37877 unknown function unknown function 1 21126 21341
YP_006907184.1 NC_018853_p8 major tail protein phrog_290 minor tail protein tail 1 6289 7275
YP_006907202.1 NC_018853_p26 hypothetical protein phrog_14927 unknown function unknown function 1 22234 22410
YP_006907220.1 NC_018853_p44 hypothetical protein phrog_25369 unknown function unknown function 1 34263 34940
YP_006907223.1 NC_018853_p47 hypothetical protein singleton unknown function unknown function 1 35750 35992
YP_006907197.1 NC_018853_p21 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other 1 16847 17425
YP_006907183.1 NC_018853_p7 hypothetical protein phrog_22587 unknown function unknown function 1 5841 6278
YP_006907191.1 NC_018853_p15 hypothetical protein phrog_1885 minor tail protein tail 1 12342 13400
YP_006907227.1 NC_018853_p51 hypothetical protein singleton unknown function unknown function 1 36817 37047
YP_006907218.1 NC_018853_p42 hypothetical protein phrog_5855 unknown function unknown function 1 32746 33669
YP_006907204.1 NC_018853_p28 hypothetical protein phrog_15072 unknown function unknown function 1 22747 22926
YP_006907186.1 NC_018853_p10 tail chaperone phrog_17335 tail protein tail 1 7713 7976
YP_006907210.1 NC_018853_p34 hypothetical protein phrog_1106 unknown function unknown function 1 29721 30113
YP_006907230.1 NC_018853_p54 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40073 40420
YP_006907206.1 NC_018853_p30 P4 family phage/plasmid primase phrog_6088 DNA primase DNA, RNA and nucleotide metabolism 1 23323 25728
YP_006907201.1 NC_018853_p25 recombination directionality factor phrog_9220 unknown function unknown function 1 21515 22234
YP_006907205.1 NC_018853_p29 HNH endonuclease phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 22916 23344
YP_006907196.1 NC_018853_p20 hypothetical protein phrog_18607 unknown function unknown function 1 16611 16790
YP_006907216.1 NC_018853_p40 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 31978 32517
YP_006907209.1 NC_018853_p33 hypothetical protein phrog_27777 unknown function unknown function 1 29448 29615
YP_006907224.1 NC_018853_p48 hypothetical protein singleton unknown function unknown function 1 36039 36284
YP_006907219.1 NC_018853_p43 hypothetical protein phrog_24218 unknown function unknown function 1 33832 34179
YP_006907195.1 NC_018853_p19 endolysin phrog_9589 endolysin lysis 1 15771 16601
YP_006907225.1 NC_018853_p49 hypothetical protein singleton unknown function unknown function 1 36281 36472
YP_006907228.1 NC_018853_p52 recombinase, serine integrase family phrog_95 integrase integration and excision 1 37133 39013
YP_006907222.1 NC_018853_p46 regulator, GntR family phrog_9285 unknown function unknown function -1 35717 35977
YP_006907215.1 NC_018853_p39 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 31560 31835
YP_006907208.1 NC_018853_p32 hypothetical protein phrog_15865 RNA polymerase sigma factor transcription regulation 1 28180 29352
YP_006907229.1 NC_018853_p53 hypothetical protein phrog_3555 unknown function unknown function 1 39763 39999
YP_006907192.1 NC_018853_p16 hypothetical protein singleton unknown function unknown function 1 13384 14004