| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_018854 |
Definition |
Escherichia phage ECBP1, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Gamaleyavirus. |
DB of origin |
REFSEQ |
Length |
69855 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
82 |
%GC |
42.72 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_006908783.1 | NC_018854_p14 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 4159 | 4539 |
| YP_006908779.1 | NC_018854_p10 | hypothetical protein | phrog_6887 | unknown function | unknown function | 1 | 3188 | 3409 |
| YP_006908834.1 | NC_018854_p65 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 55299 | 56519 |
| YP_006908848.1 | NC_018854_p79 | hypothetical protein | phrog_11661 | unknown function | unknown function | 1 | 68404 | 68718 |
| YP_006908846.1 | NC_018854_p77 | hypothetical protein | phrog_7213 | unknown function | unknown function | 1 | 67548 | 67838 |
| YP_006908823.1 | NC_018854_p54 | hypothetical protein | phrog_7641 | unknown function | unknown function | 1 | 32750 | 33190 |
| YP_006908839.1 | NC_018854_p70 | hypothetical protein | phrog_5211 | unknown function | unknown function | -1 | 60527 | 60856 |
| YP_006908850.1 | NC_018854_p81 | hypothetical protein | phrog_16338 | unknown function | unknown function | 1 | 69036 | 69320 |
| YP_006908772.1 | NC_018854_p3 | hypothetical protein | phrog_24403 | unknown function | unknown function | 1 | 1077 | 1415 |
| YP_006908845.1 | NC_018854_p76 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 66687 | 67376 |
| YP_006908844.1 | NC_018854_p75 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 65105 | 66694 |
| YP_006908827.1 | NC_018854_p58 | gram positive anchor domain protein | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 36570 | 47282 |
| YP_006908803.1 | NC_018854_p34 | hypothetical protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 14147 | 15091 |
| YP_006908816.1 | NC_018854_p47 | hypothetical protein | phrog_9919 | unknown function | unknown function | 1 | 26370 | 26846 |
| YP_006908802.1 | NC_018854_p33 | hypothetical protein | phrog_9867 | unknown function | unknown function | 1 | 13704 | 14147 |
| YP_006908851.1 | NC_018854_p82 | hypothetical protein | phrog_1365 | unknown function | unknown function | 1 | 69317 | 69631 |
| YP_006908792.1 | NC_018854_p23 | hypothetical protein | phrog_19185 | unknown function | unknown function | 1 | 8893 | 9153 |
| YP_006908824.1 | NC_018854_p55 | hypothetical protein | phrog_14773 | unknown function | unknown function | 1 | 33326 | 33592 |
| YP_006908842.1 | NC_018854_p73 | hypothetical protein | phrog_12242 | tail protein | tail | -1 | 63264 | 64391 |
| YP_006908822.1 | NC_018854_p53 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 32194 | 32748 |
| YP_006908812.1 | NC_018854_p43 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 21628 | 22938 |
| YP_006908808.1 | NC_018854_p39 | rIIA lysis inhibitor | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 16131 | 18698 |
| YP_006908805.1 | NC_018854_p36 | hypothetical protein | phrog_7900 | unknown function | unknown function | 1 | 15388 | 15600 |
| YP_006908796.1 | NC_018854_p27 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 9906 | 10958 |
| YP_006908770.1 | NC_018854_p1 | hypothetical protein | phrog_16338 | unknown function | unknown function | 1 | 138 | 464 |
| YP_006908849.1 | NC_018854_p80 | hypothetical protein | phrog_12099 | unknown function | unknown function | 1 | 68722 | 69036 |
| YP_006908826.1 | NC_018854_p57 | hypothetical protein | phrog_872 | unknown function | unknown function | 1 | 36044 | 36535 |
| YP_006908797.1 | NC_018854_p28 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11200 | 12138 |
| YP_006908795.1 | NC_018854_p26 | hypothetical protein | phrog_11132 | unknown function | unknown function | 1 | 9542 | 9871 |
| YP_006908810.1 | NC_018854_p41 | hypothetical protein | phrog_6377 | unknown function | unknown function | 1 | 20814 | 21209 |
| YP_006908807.1 | NC_018854_p38 | hypothetical protein | phrog_7471 | unknown function | unknown function | 1 | 15912 | 16103 |
| YP_006908847.1 | NC_018854_p78 | hypothetical protein | phrog_9160 | unknown function | unknown function | 1 | 68039 | 68386 |
| YP_006908818.1 | NC_018854_p49 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 27412 | 28392 |
| YP_006908821.1 | NC_018854_p52 | single-stranded DNA-binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31391 | 32194 |
| YP_006908791.1 | NC_018854_p22 | hypothetical protein | phrog_7508 | unknown function | unknown function | 1 | 8708 | 8896 |
| YP_006908794.1 | NC_018854_p25 | hypothetical protein | phrog_7665 | unknown function | unknown function | 1 | 9356 | 9541 |
| YP_006908798.1 | NC_018854_p29 | deoxycytidine triphosphate deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 12138 | 12644 |
| YP_006908833.1 | NC_018854_p64 | major coat protein | phrog_1357 | major head protein | head and packaging | -1 | 54080 | 55282 |
| YP_006908820.1 | NC_018854_p51 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 30599 | 31351 |
| YP_006908785.1 | NC_018854_p16 | hypothetical protein | phrog_14487 | unknown function | unknown function | 1 | 4896 | 5156 |
| YP_006908787.1 | NC_018854_p18 | hypothetical protein | phrog_15352 | unknown function | unknown function | 1 | 6018 | 6179 |
| YP_006908777.1 | NC_018854_p8 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 2651 | 2959 |
| YP_006908780.1 | NC_018854_p11 | hypothetical protein | phrog_1972 | unknown function | unknown function | 1 | 3406 | 3663 |
| YP_006908789.1 | NC_018854_p20 | hypothetical protein | phrog_12530 | unknown function | unknown function | 1 | 7512 | 7694 |
| YP_006908831.1 | NC_018854_p62 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 52458 | 53294 |
| YP_006908837.1 | NC_018854_p68 | hypothetical protein | phrog_20026 | Rz-like spanin | lysis | -1 | 59170 | 59394 |
| YP_006908817.1 | NC_018854_p48 | phage-associated homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 26918 | 27415 |
| YP_006908788.1 | NC_018854_p19 | T7-like RNA polymerase | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 6237 | 7454 |
| YP_006908838.1 | NC_018854_p69 | hypothetical protein | phrog_315 | endolysin | lysis | -1 | 59657 | 60292 |
| YP_006908786.1 | NC_018854_p17 | RNA polymerase RNAP1 | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5210 | 6028 |
| YP_006908835.1 | NC_018854_p66 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 56539 | 56883 |
| YP_006908773.1 | NC_018854_p4 | hypothetical protein | phrog_4099 | unknown function | unknown function | 1 | 1478 | 1951 |
| YP_006908793.1 | NC_018854_p24 | hypothetical protein | phrog_18793 | unknown function | unknown function | 1 | 9150 | 9359 |
| YP_006908800.1 | NC_018854_p31 | hypothetical protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | 1 | 12958 | 13200 |
| YP_006908784.1 | NC_018854_p15 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 4543 | 4893 |
| YP_006908841.1 | NC_018854_p72 | hypothetical protein | phrog_4217 | tail protein | tail | -1 | 61102 | 63216 |
| YP_006908781.1 | NC_018854_p12 | hypothetical protein | phrog_24669 | unknown function | unknown function | 1 | 3660 | 3851 |
| YP_006908774.1 | NC_018854_p5 | hypothetical protein | phrog_13158 | unknown function | unknown function | 1 | 2092 | 2280 |
| YP_006908778.1 | NC_018854_p9 | hypothetical protein | phrog_20151 | unknown function | unknown function | 1 | 2952 | 3182 |
| YP_006908811.1 | NC_018854_p42 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 21256 | 21594 |
| YP_006908832.1 | NC_018854_p63 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 53371 | 54006 |
| YP_006908801.1 | NC_018854_p32 | hypothetical protein | phrog_12812 | unknown function | unknown function | 1 | 13318 | 13704 |
| YP_006908804.1 | NC_018854_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15178 | 15327 |
| YP_006908830.1 | NC_018854_p61 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 49802 | 52456 |
| YP_006908809.1 | NC_018854_p40 | rIIB protector from prophage-induced early lysis | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 18703 | 20751 |
| YP_006908843.1 | NC_018854_p74 | 30 kDa protein | phrog_2125 | virion structural protein | head and packaging | -1 | 64388 | 65098 |
| YP_006908776.1 | NC_018854_p7 | hypothetical protein | phrog_7648 | unknown function | unknown function | 1 | 2444 | 2572 |
| YP_006908825.1 | NC_018854_p56 | hypothetical protein | phrog_322 | unknown function | unknown function | 1 | 35544 | 35924 |
| YP_006908814.1 | NC_018854_p45 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 23489 | 26068 |
| YP_006908815.1 | NC_018854_p46 | hypothetical protein | phrog_5974 | unknown function | unknown function | 1 | 26065 | 26370 |
| YP_006908840.1 | NC_018854_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 60971 | 61105 |
| YP_006908813.1 | NC_018854_p44 | hypothetical protein | phrog_4881 | unknown function | unknown function | 1 | 22949 | 23479 |
| YP_006908782.1 | NC_018854_p13 | hypothetical protein | phrog_7827 | unknown function | unknown function | 1 | 3848 | 4162 |
| YP_006908829.1 | NC_018854_p60 | 16.5 kDa protein | phrog_2646 | unknown function | unknown function | -1 | 49345 | 49788 |
| YP_006908771.1 | NC_018854_p2 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 666 | 989 |
| YP_006908828.1 | NC_018854_p59 | 66 kDa protein | phrog_6126 | virion structural protein | head and packaging | -1 | 47386 | 49332 |
| YP_006908775.1 | NC_018854_p6 | hypothetical protein | phrog_5407 | unknown function | unknown function | 1 | 2277 | 2459 |
| YP_006908836.1 | NC_018854_p67 | 94 kDa protein | phrog_1216 | portal protein | head and packaging | -1 | 56897 | 59167 |
| YP_006908799.1 | NC_018854_p30 | hypothetical protein | phrog_7594 | unknown function | unknown function | 1 | 12675 | 12884 |
| YP_006908806.1 | NC_018854_p37 | hypothetical protein | phrog_9004 | unknown function | unknown function | 1 | 15593 | 15919 |
| YP_006908819.1 | NC_018854_p50 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28389 | 30542 |
| YP_006908790.1 | NC_018854_p21 | multidomain protein | phrog_2973 | Hoc-like head decoration | head and packaging | 1 | 7769 | 8602 |