Genomic map of Streptococcus phage phiNJ2 (NC_019418)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019418
Definition
Streptococcus phage phiNJ2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
37282
Host Name
Streptococcus suis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
39.41
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006990324.1 NC_019418_p5 integral membrane protein DUF106 phrog_4257 unknown function unknown function -1 1611 2066
YP_006990361.1 NC_019418_p42 hypothetical protein phrog_8736 unknown function unknown function -1 28914 29192
YP_006990374.1 NC_019418_p55 protease phrog_9505 unknown function unknown function 1 35297 35905
YP_006990343.1 NC_019418_p24 phage portal protein phrog_533 portal protein head and packaging -1 19199 20782
YP_006990363.1 NC_019418_p44 hypothetical protein singleton unknown function unknown function -1 29710 29931
YP_006990329.1 NC_019418_p10 envelope protein phrog_1204 tail protein tail -1 9789 12965
YP_006990337.1 NC_019418_p18 phosphate-selective porin O and P phrog_541 head-tail adaptor connector -1 15611 16006
YP_006990366.1 NC_019418_p47 hypothetical protein phrog_10455 unknown function unknown function -1 31504 31830
YP_006990342.1 NC_019418_p23 phage minor capsid protein 2 phrog_581 minor head protein head and packaging -1 18045 19196
YP_006990370.1 NC_019418_p51 hypothetical protein phrog_3624 unknown function unknown function -1 33734 33847
YP_006990367.1 NC_019418_p48 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31845 32543
YP_006990354.1 NC_019418_p35 hypothetical protein singleton unknown function unknown function -1 25774 25896
YP_006990359.1 NC_019418_p40 DNA binding protein phrog_3947 unknown function unknown function -1 27920 28123
YP_006990328.1 NC_019418_p9 phage tail protein phrog_202 distal tail protein Dit tail -1 8290 9792
YP_006990348.1 NC_019418_p29 hypothetical protein phrog_3511 unknown function unknown function -1 23885 24265
YP_006990320.1 NC_019418_p1 recombinase phrog_95 integrase integration and excision 1 1 196
YP_006990320.1 NC_019418_p1 recombinase phrog_95 integrase integration and excision 1 36039 37282
YP_006990344.1 NC_019418_p25 phage terminase large subunit phrog_2 terminase large subunit head and packaging -1 20795 22108
YP_006990347.1 NC_019418_p28 hypothetical protein phrog_8680 unknown function unknown function -1 23146 23817
YP_006990326.1 NC_019418_p7 hypothetical protein phrog_372 tail protein tail -1 2404 4467
YP_006990321.1 NC_019418_p2 hypothetical protein phrog_2133 unknown function unknown function -1 260 445
YP_006990362.1 NC_019418_p43 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 29208 29720
YP_006990358.1 NC_019418_p39 hypothetical protein phrog_8 transcriptional regulator transcription regulation -1 27489 27923
YP_006990323.1 NC_019418_p4 holin protein phrog_881 holin lysis -1 1433 1636
YP_006990345.1 NC_019418_p26 phage terminase small subunit phrog_51 terminase small subunit head and packaging -1 22095 22574
YP_006990341.1 NC_019418_p22 hypothetical protein phrog_194 head scaffolding protein head and packaging -1 17281 17898
YP_006990369.1 NC_019418_p50 hypothetical protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism -1 33374 33691
YP_006990325.1 NC_019418_p6 hypothetical protein phrog_2566 unknown function unknown function -1 2079 2360
YP_006990371.1 NC_019418_p52 hypothetical protein phrog_8322 unknown function unknown function -1 33856 34029
YP_006990339.1 NC_019418_p20 hypothetical protein phrog_2250 unknown function unknown function -1 16253 16438
YP_006990340.1 NC_019418_p21 hypothetical protein phrog_544 major head protein head and packaging -1 16438 17277
YP_006990336.1 NC_019418_p17 minor capsid protein phrog_793 head-tail adaptor connector -1 15295 15621
YP_006990327.1 NC_019418_p8 antireceptor protein phrog_588 tail fiber protein and host specificity tail -1 4481 8290
YP_006990355.1 NC_019418_p36 hypothetical protein phrog_17605 unknown function unknown function -1 25896 26282
YP_006990338.1 NC_019418_p19 spermine/spermidine synthase phrog_2910 unknown function unknown function -1 16048 16275
YP_006990353.1 NC_019418_p34 hypothetical protein phrog_884 unknown function unknown function -1 25468 25770
YP_006990334.1 NC_019418_p15 minor capsid protein phrog_913 minor head protein head and packaging -1 14536 14943
YP_006990364.1 NC_019418_p45 mazG nucleotide pyrophosphohydrolase phrog_1992 MazG-like pyrophosphatase other -1 29921 30442
YP_006990373.1 NC_019418_p54 peptidase S24-like protein phrog_4 transcriptional repressor transcription regulation 1 34567 35322
YP_006990356.1 NC_019418_p37 hypothetical protein phrog_1029 unknown function unknown function -1 26302 27039
YP_006990372.1 NC_019418_p53 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 34134 34400
YP_006990335.1 NC_019418_p16 minor capsid protein phrog_556 minor head protein head and packaging -1 14945 15295
YP_006990352.1 NC_019418_p33 hypothetical protein phrog_4960 unknown function unknown function -1 25291 25467
YP_006990365.1 NC_019418_p46 hypothetical protein phrog_674 unknown function unknown function -1 30432 31493
YP_006990357.1 NC_019418_p38 hypothetical protein phrog_997 replication terminator DNA, RNA and nucleotide metabolism -1 27041 27478
YP_006990360.1 NC_019418_p41 C-5 cytosine-specific DNA methylase phrog_2882 DNA methyltransferase other -1 28120 28869
YP_006990322.1 NC_019418_p3 phage amidase protein phrog_1309 endolysin lysis -1 593 1303
YP_006990346.1 NC_019418_p27 hypothetical protein phrog_9479 unknown function unknown function -1 22766 23149
YP_006990350.1 NC_019418_p31 endodeoxyribonuclease RusA phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 24638 25057
YP_006990368.1 NC_019418_p49 hypothetical protein phrog_7964 unknown function unknown function -1 32547 33122
YP_006990349.1 NC_019418_p30 yopX protein phrog_98 unknown function unknown function -1 24262 24654
YP_006990331.1 NC_019418_p12 hypothetical protein singleton unknown function unknown function -1 13274 13684
YP_006990332.1 NC_019418_p13 hypothetical protein phrog_1061 unknown function unknown function -1 13684 14052
YP_006990333.1 NC_019418_p14 hypothetical protein phrog_820 major tail protein tail -1 14074 14532
YP_006990351.1 NC_019418_p32 hypothetical protein phrog_18515 unknown function unknown function -1 25054 25284
YP_006990330.1 NC_019418_p11 hypothetical protein singleton unknown function unknown function -1 13095 13217