Genomic map of Escherichia phage TL-2011c (NC_019442)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019442
Definition
Escherichia phage TL-2011c, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Oslovirus.
DB of origin
REFSEQ
Length
60523
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
72
%GC
50.29
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007001490.1 NC_019442_p70 hypothetical protein phrog_20690 unknown function unknown function 1 51518 53263
YP_007001431.1 NC_019442_p11 hypothetical protein phrog_631 unknown function unknown function -1 6065 6580
YP_007001421.1 NC_019442_p1 excisionase phrog_539 excisionase integration and excision -1 1360 1644
YP_007001455.1 NC_019442_p35 late gene regulator Q phrog_79 anti-termination protein Q-like transcription regulation 1 23219 23653
YP_007001480.1 NC_019442_p60 hypothetical protein phrog_511 internal virion protein head and packaging 1 43249 44874
YP_007001486.1 NC_019442_p66 hypothetical protein phrog_611 unknown function unknown function 1 48805 49461
YP_007001461.1 NC_019442_p41 hypothetical protein phrog_311 unknown function unknown function 1 28455 28727
YP_007001428.1 NC_019442_p8 antirepressor phrog_377 anti-repressor Ant transcription regulation -1 3977 4606
YP_007001434.1 NC_019442_p14 hypothetical protein phrog_1363 unknown function unknown function -1 7875 8270
YP_007001422.1 NC_019442_p2 bacteriophage protein phrog_285 unknown function unknown function -1 1690 1941
YP_007001462.1 NC_019442_p42 lysis protein S phrog_20 holin lysis 1 28804 29019
YP_007001438.1 NC_019442_p18 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 10241 10930
YP_007001426.1 NC_019442_p6 adenine methylase phrog_359 DNA methyltransferase other -1 2867 3493
YP_007001470.1 NC_019442_p50 hypothetical protein phrog_23049 unknown function unknown function 1 36675 36857
YP_007001492.1 NC_019442_p72 hypothetical protein phrog_17575 unknown function unknown function -1 60083 60199
YP_007001442.1 NC_019442_p22 hypothetical protein phrog_294 Kil protein for bacterial septation inhibition other -1 12489 12701
YP_007001460.1 NC_019442_p40 hypothetical protein phrog_494 unknown function unknown function 1 28235 28414
YP_007001441.1 NC_019442_p21 hypothetical protein phrog_1635 unknown function unknown function -1 12196 12417
YP_007001487.1 NC_019442_p67 hypothetical protein phrog_596 unknown function unknown function 1 49464 49910
YP_007001443.1 NC_019442_p23 hypothetical protein phrog_1760 anti-repressor transcription regulation -1 12772 13446
YP_007001479.1 NC_019442_p59 hypothetical protein phrog_2014 unknown function unknown function 1 42767 42955
YP_007001446.1 NC_019442_p26 modification methylase BsuBI phrog_1600 DNA methyltransferase other -1 16054 17433
YP_007001439.1 NC_019442_p19 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 10927 11946
YP_007001452.1 NC_019442_p32 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 22015 22464
YP_007001435.1 NC_019442_p15 hypothetical protein phrog_210 unknown function unknown function -1 8347 9168
YP_007001448.1 NC_019442_p28 hypothetical protein phrog_35 transcriptional repressor transcription regulation 1 18428 18631
YP_007001450.1 NC_019442_p30 helicase domain protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 19534 21054
YP_007001463.1 NC_019442_p43 lysozyme phrog_7 endolysin lysis 1 29024 29557
YP_007001491.1 NC_019442_p71 hypothetical protein phrog_616 unknown function unknown function 1 53226 60017
YP_007001424.1 NC_019442_p4 hypothetical protein phrog_1888 unknown function unknown function -1 2306 2659
YP_007001466.1 NC_019442_p46 terminase small subunit phrog_370 terminase small subunit head and packaging 1 31054 31860
YP_007001425.1 NC_019442_p5 hypothetical protein phrog_292 unknown function unknown function -1 2695 2907
YP_007001478.1 NC_019442_p58 hypothetical protein phrog_576 tail fiber protein tail 1 42357 42626
YP_007001482.1 NC_019442_p62 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 46438 47055
YP_007001465.1 NC_019442_p45 Bor protein precursor phrog_260 Bor-like outer membrane protein other -1 30352 30645
YP_007001445.1 NC_019442_p25 type II restriction enzyme BsuBI phrog_1639 restriction endonuclease DNA, RNA and nucleotide metabolism -1 15104 16057
YP_007001427.1 NC_019442_p7 hypothetical protein phrog_1680 unknown function unknown function -1 3490 3921
YP_007001458.1 NC_019442_p38 hypothetical protein phrog_143 unknown function unknown function 1 26163 28100
YP_007001485.1 NC_019442_p65 hypothetical protein phrog_610 unknown function unknown function 1 48310 48711
YP_007001468.1 NC_019442_p48 portal protein phrog_156 portal protein head and packaging 1 33547 35691
YP_007001475.1 NC_019442_p55 hypothetical protein phrog_399 structural protein head and packaging 1 39598 40248
YP_007001457.1 NC_019442_p37 Shiga toxin 2 subunit B phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 25408 25677
YP_007001483.1 NC_019442_p63 outer membrane protein Lom precursor phrog_108 Lom outer membrane protein other 1 47146 47880
YP_007001471.1 NC_019442_p51 hypothetical protein phrog_334 major head protein head and packaging 1 36881 38095
YP_007001454.1 NC_019442_p34 phage NinH family protein phrog_268 unknown function unknown function 1 23032 23226
YP_007001436.1 NC_019442_p16 hypothetical protein phrog_204 unknown function unknown function -1 9232 9579
YP_007001473.1 NC_019442_p53 hypothetical protein phrog_482 unknown function unknown function 1 38590 39051
YP_007001477.1 NC_019442_p57 tail fiber protein phrog_366 tail fiber protein tail 1 40607 42355
YP_007001467.1 NC_019442_p47 large subunit terminase phrog_2 terminase large subunit head and packaging 1 31841 33547
YP_007001481.1 NC_019442_p61 hypothetical protein phrog_496 tail fiber protein tail 1 44871 46139
YP_007001474.1 NC_019442_p54 hypothetical protein phrog_437 virion structural protein head and packaging 1 39035 39598
YP_007001437.1 NC_019442_p17 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 9654 10241
YP_007001451.1 NC_019442_p31 phage DNA primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism 1 21044 22015
YP_007001484.1 NC_019442_p64 hypothetical protein phrog_251 MokW-like host killing moron, auxiliary metabolic gene and host takeover 1 48113 48253
YP_007001453.1 NC_019442_p33 hypothetical protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 22472 23035
YP_007001449.1 NC_019442_p29 hypothetical protein phrog_1347 unknown function unknown function 1 19163 19540
YP_007001456.1 NC_019442_p36 Shiga toxin 2 subunit A phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 24437 25396
YP_007001432.1 NC_019442_p12 hypothetical protein phrog_1380 unknown function unknown function -1 6770 6946
YP_007001440.1 NC_019442_p20 hypothetical protein phrog_1050 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 11894 12175
YP_007001472.1 NC_019442_p52 hypothetical protein phrog_486 virion structural protein head and packaging 1 38151 38540
YP_007001429.1 NC_019442_p9 hypothetical protein phrog_6904 unknown function unknown function -1 4856 5140
YP_007001447.1 NC_019442_p27 repressor protein CI phrog_4 transcriptional repressor transcription regulation -1 17619 18332
YP_007001489.1 NC_019442_p69 hypothetical protein phrog_601 unknown function unknown function 1 50183 51448
YP_007001433.1 NC_019442_p13 hypothetical protein phrog_492 unknown function unknown function -1 7119 7724
YP_007001444.1 NC_019442_p24 phage regulatory protein, Rha family phrog_995 transcriptional regulator transcription regulation -1 13702 14349
YP_007001430.1 NC_019442_p10 hypothetical protein phrog_60 unknown function unknown function -1 5496 6068
YP_007001423.1 NC_019442_p3 hypothetical protein phrog_1001 unknown function unknown function -1 1929 2162
YP_007001469.1 NC_019442_p49 hypothetical protein phrog_479 unknown function unknown function 1 35849 36688
YP_007001464.1 NC_019442_p44 hypothetical protein phrog_13 Rz-like spanin lysis 1 29856 30320
YP_007001476.1 NC_019442_p56 hypothetical protein singleton unknown function unknown function 1 40245 40610
YP_007001459.1 NC_019442_p39 hypothetical protein phrog_9558 unknown function unknown function 1 28097 28222
YP_007001488.1 NC_019442_p68 hypothetical protein phrog_594 unknown function unknown function 1 49921 50172