Genomic map of Pseudomonas phage JG004 (NC_019450)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019450
Definition
Pseudomonas phage JG004, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Pakpunavirus.
DB of origin
REFSEQ
Length
93017
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
161
%GC
49.26
Number of singletons
6
Number of paralogs
6

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007002413.1 NC_019450_p115 hypothetical protein phrog_6971 unknown function unknown function 1 70840 71175
YP_007002425.1 NC_019450_p103 hypothetical protein phrog_7883 unknown function unknown function 1 66107 66340
YP_007003118.1 NC_019450_p144 hypothetical protein phrog_7542 unknown function unknown function 1 85624 86064
YP_007002519.1 NC_019450_p9 hypothetical protein phrog_7430 unknown function unknown function -1 3799 4110
YP_007002396.1 NC_019450_p132 hypothetical protein phrog_8175 unknown function unknown function 1 80941 81114
YP_007002415.1 NC_019450_p113 hypothetical protein phrog_7135 unknown function unknown function 1 70405 70587
YP_007002406.1 NC_019450_p122 hypothetical protein phrog_343 unknown function unknown function 1 76846 77094
YP_007002485.1 NC_019450_p43 hypothetical protein phrog_5067 unknown function unknown function -1 20716 21072
YP_007002472.1 NC_019450_p56 hypothetical protein phrog_4087 unknown function unknown function 1 32579 33142
YP_007002412.1 NC_019450_p116 hypothetical protein phrog_7016 unknown function unknown function 1 71179 71391
YP_007002470.1 NC_019450_p58 endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 34501 35277
YP_007003113.1 NC_019450_p74 tail fiber protein phrog_2282 tail fiber protein tail 1 48227 49246
YP_007002512.1 NC_019450_p16 hypothetical protein phrog_335 phosphatase other -1 7013 7492
YP_007002471.1 NC_019450_p57 structural protein phrog_205 tail sheath tail 1 33155 34264
YP_007002448.1 NC_019450_p80 hypothetical protein phrog_2827 unknown function unknown function -1 51345 51653
YP_007002451.1 NC_019450_p77 hypothetical protein phrog_4349 Rz-like spanin lysis 1 50067 50504
YP_007002435.1 NC_019450_p93 hypothetical protein phrog_6917 unknown function unknown function 1 57073 57237
YP_007002509.1 NC_019450_p19 hypothetical protein singleton unknown function unknown function 1 9385 9603
YP_007002481.1 NC_019450_p47 terminase large subunit phrog_979 terminase large subunit head and packaging 1 25342 26862
YP_007002433.1 NC_019450_p95 hypothetical protein phrog_31088 unknown function unknown function -1 57639 57935
YP_007003121.1 NC_019450_p155 hypothetical protein phrog_5680 unknown function unknown function 1 89709 90236
YP_007002395.1 NC_019450_p133 hypothetical protein phrog_38684 unknown function unknown function -1 81553 81717
YP_007002418.1 NC_019450_p110 hypothetical protein phrog_4305 unknown function unknown function 1 69278 69448
YP_007002407.1 NC_019450_p121 ribonucleoside-diphosphate reductase alpha chain phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 74904 76649
YP_007002390.1 NC_019450_p138 hypothetical protein phrog_6265 unknown function unknown function 1 83330 83458
YP_007002436.1 NC_019450_p92 hypothetical protein phrog_7101 unknown function unknown function 1 56430 57086
YP_007002402.1 NC_019450_p126 hypothetical protein phrog_6863 unknown function unknown function 1 78066 78332
YP_007002528.1 NC_019450_p160 hypothetical protein phrog_4310 unknown function unknown function 1 91989 92183
YP_007002503.1 NC_019450_p25 hypothetical protein phrog_5447 unknown function unknown function -1 12583 12819
YP_007002450.1 NC_019450_p78 hypothetical protein phrog_5388 Rz-like spanin lysis 1 50521 50652
YP_007002541.1 NC_019450_p145 hypothetical protein phrog_17859 unknown function unknown function 1 86061 86333
YP_007002511.1 NC_019450_p17 hypothetical protein phrog_6997 unknown function unknown function -1 7489 7686
YP_007002443.1 NC_019450_p85 hypothetical protein phrog_4794 unknown function unknown function -1 54113 54346
YP_007002422.1 NC_019450_p106 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 67662 68225
YP_007002487.1 NC_019450_p41 hypothetical protein phrog_6961 unknown function unknown function -1 19874 20059
YP_007002546.1 NC_019450_p161 hypothetical protein singleton unknown function unknown function -1 92311 92541
YP_007002537.1 NC_019450_p149 hypothetical protein phrog_4025 unknown function unknown function 1 87092 87358
YP_007002510.1 NC_019450_p18 nictotinate phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 7698 9386
YP_007002520.1 NC_019450_p8 hypothetical protein phrog_7742 unknown function unknown function -1 3533 3811
YP_007002457.1 NC_019450_p71 hypothetical protein phrog_587 structural protein head and packaging 1 44513 45244
YP_007002393.1 NC_019450_p135 hypothetical protein phrog_6353 unknown function unknown function 1 82416 82727
YP_007002399.1 NC_019450_p129 hypothetical protein phrog_5041 unknown function unknown function 1 79061 79300
YP_007002419.1 NC_019450_p109 hypothetical protein phrog_7013 unknown function unknown function 1 68844 69281
YP_007002397.1 NC_019450_p131 hypothetical protein phrog_6266 unknown function unknown function 1 79732 80718
YP_007002502.1 NC_019450_p26 phosphoesterase phrog_547 phosphoesterase other -1 12832 13386
YP_007002507.1 NC_019450_p21 hypothetical protein phrog_2071 ATPase other -1 10543 10962
YP_007002398.1 NC_019450_p130 hypothetical protein phrog_6076 unknown function unknown function 1 79312 79563
YP_007002411.1 NC_019450_p117 hypothetical protein phrog_7063 3'-phosphatase, 5'-polynucleotide kinase other 1 71384 72334
YP_007002466.1 NC_019450_p62 hypothetical protein phrog_1613 tail assembly chaperone tail 1 36882 37253
YP_007002431.1 NC_019450_p97 hypothetical protein phrog_7863 unknown function unknown function 1 58653 58838
YP_007002486.1 NC_019450_p42 protease subunit phrog_1827 ATP-dependent protease other -1 20120 20668
YP_007002401.1 NC_019450_p127 hypothetical protein phrog_6974 unknown function unknown function 1 78352 78855
YP_007002460.1 NC_019450_p68 baseplate protein phrog_11 baseplate spike tail 1 41907 42647
YP_007002489.1 NC_019450_p39 hypothetical protein phrog_7048 unknown function unknown function -1 19085 19516
YP_007002538.1 NC_019450_p148 hypothetical protein phrog_6913 unknown function unknown function 1 86835 87059
YP_007002404.1 NC_019450_p124 hypothetical protein phrog_7088 unknown function unknown function 1 77327 77563
YP_007002417.1 NC_019450_p111 hypothetical protein singleton unknown function unknown function 1 69381 69632
YP_007002463.1 NC_019450_p65 hypothetical protein phrog_817 tail fiber protein tail 1 39873 40634
YP_007002508.1 NC_019450_p20 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 9658 10533
YP_007002420.1 NC_019450_p108 hypothetical protein phrog_7621 unknown function unknown function 1 68641 68847
YP_007003120.1 NC_019450_p153 hypothetical protein phrog_6091 unknown function unknown function 1 88506 88757
YP_007002469.1 NC_019450_p59 hypothetical protein phrog_280 virion structural protein head and packaging 1 35290 35814
YP_007002468.1 NC_019450_p60 hypothetical protein phrog_280 virion structural protein head and packaging 1 35916 36389
YP_007002467.1 NC_019450_p61 hypothetical protein phrog_280 virion structural protein head and packaging 1 36389 36868
YP_007002536.1 NC_019450_p150 hypothetical protein phrog_6935 unknown function unknown function 1 87355 87747
YP_007002482.1 NC_019450_p46 hypothetical protein phrog_30774 unknown function unknown function -1 24939 25220
YP_007002533.1 NC_019450_p154 hypothetical protein phrog_1106 unknown function unknown function 1 89143 89622
YP_007002527.1 NC_019450_p1 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 344 997
YP_007003122.1 NC_019450_p157 hypothetical protein phrog_7753 unknown function unknown function 1 90770 91222
YP_007003114.1 NC_019450_p98 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 58892 60754
YP_007003117.1 NC_019450_p142 hypothetical protein phrog_2554 unknown function unknown function 1 84682 85353
YP_007002518.1 NC_019450_p10 hypothetical protein phrog_2614 unknown function unknown function -1 4110 4496
YP_007002524.1 NC_019450_p4 hypothetical protein phrog_7340 unknown function unknown function -1 1730 1996
YP_007002526.1 NC_019450_p2 hypothetical protein singleton unknown function unknown function 1 1097 1240
YP_007002494.1 NC_019450_p34 hypothetical protein phrog_2251 unknown function unknown function -1 17334 17546
YP_007002543.1 NC_019450_p143 hypothetical protein phrog_5336 unknown function unknown function 1 85358 85696
YP_007002522.1 NC_019450_p6 hypothetical protein phrog_6773 unknown function unknown function -1 2390 2812
YP_007002465.1 NC_019450_p63 hypothetical protein phrog_4625 unknown function unknown function 1 37361 37513
YP_007002473.1 NC_019450_p55 hypothetical protein phrog_939 head protein head and packaging 1 32202 32582
YP_007002449.1 NC_019450_p79 hypothetical protein phrog_4172 unknown function unknown function 1 50642 50947
YP_007002403.1 NC_019450_p125 hypothetical protein phrog_9028 unknown function unknown function 1 77563 77877
YP_007002440.1 NC_019450_p88 hypothetical protein singleton unknown function unknown function 1 54863 55057
YP_007002493.1 NC_019450_p35 hypothetical protein phrog_5276 unknown function unknown function -1 17543 17812
YP_007002478.1 NC_019450_p50 hypothetical protein phrog_4103 unknown function unknown function 1 28791 29708
YP_007002491.1 NC_019450_p37 hypothetical protein phrog_3948 unknown function unknown function -1 18482 18796
YP_007002434.1 NC_019450_p94 hypothetical protein phrog_4991 unknown function unknown function 1 57240 57542
YP_007002499.1 NC_019450_p29 cell wall hydrolase phrog_938 endolysin lysis -1 14369 14929
YP_007002455.1 NC_019450_p73 hypothetical protein phrog_4628 tail fiber assembly tail 1 47358 47732
YP_007002521.1 NC_019450_p7 hypothetical protein phrog_7453 unknown function unknown function -1 2829 3530
YP_007003116.1 NC_019450_p140 hypothetical protein phrog_4323 unknown function unknown function 1 83840 83986
YP_007002405.1 NC_019450_p123 hypothetical protein phrog_6898 unknown function unknown function 1 77094 77327
YP_007002496.1 NC_019450_p32 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 16669 17085
YP_007002515.1 NC_019450_p13 hypothetical protein phrog_6932 unknown function unknown function -1 5573 5884
YP_007002424.1 NC_019450_p104 hypothetical protein phrog_6983 unknown function unknown function 1 66350 66571
YP_007002531.1 NC_019450_p156 hypothetical protein phrog_6605 unknown function unknown function 1 90236 90517
YP_007002464.1 NC_019450_p64 tape measure protein phrog_991 tail length tape measure protein tail 1 37510 39876
YP_007002456.1 NC_019450_p72 tail fiber protein phrog_2282 tail fiber protein tail 1 45255 47330
YP_007002492.1 NC_019450_p36 HNH endonuclease phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism -1 17821 18480
YP_007002484.1 NC_019450_p44 hypothetical protein phrog_5019 unknown function unknown function -1 21069 21536
YP_007002428.1 NC_019450_p100 hypothetical protein phrog_3878 unknown function unknown function 1 63619 64017
YP_007002442.1 NC_019450_p86 hypothetical protein phrog_4794 unknown function unknown function -1 54384 54617
YP_007002500.1 NC_019450_p28 phosphohydrolase phrog_990 metal-dependent phosphohydrolase other -1 13807 14367
YP_007002439.1 NC_019450_p89 hypothetical protein phrog_6163 unknown function unknown function 1 55058 55255
YP_007003123.1 NC_019450_p158 hypothetical protein phrog_5746 unknown function unknown function 1 91240 91530
YP_007002480.1 NC_019450_p48 hypothetical protein phrog_113 portal protein head and packaging 1 26875 28314
YP_007002423.1 NC_019450_p105 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 66613 67665
YP_007002444.1 NC_019450_p84 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 52946 54082
YP_007002514.1 NC_019450_p14 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 5961 6668
YP_007002394.1 NC_019450_p134 hypothetical protein phrog_3768 unknown function unknown function 1 81743 82216
YP_007002400.1 NC_019450_p128 hypothetical protein phrog_6846 unknown function unknown function 1 78865 79059
YP_007002479.1 NC_019450_p49 methyltransferase phrog_1530 DNA methyltransferase other 1 28324 28794
YP_007002409.1 NC_019450_p119 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 73491 73835
YP_007002437.1 NC_019450_p91 hypothetical protein phrog_4256 unknown function unknown function 1 55891 56433
YP_007002545.1 NC_019450_p141 hypothetical protein phrog_7133 unknown function unknown function 1 84223 84606
YP_007002539.1 NC_019450_p147 hypothetical protein phrog_4261 unknown function unknown function 1 86542 86838
YP_007002495.1 NC_019450_p33 hypothetical protein phrog_7094 unknown function unknown function -1 17088 17324
YP_007003112.1 NC_019450_p11 hypothetical protein phrog_6967 unknown function unknown function -1 4740 5114
YP_007002475.1 NC_019450_p53 hypothetical protein phrog_1732 unknown function unknown function 1 31275 31751
YP_007003119.1 NC_019450_p152 hypothetical protein phrog_4261 unknown function unknown function 1 88394 89107
YP_007002445.1 NC_019450_p83 hypothetical protein phrog_7461 unknown function unknown function -1 52788 52943
YP_007002447.1 NC_019450_p81 hypothetical protein phrog_7083 unknown function unknown function -1 51664 51984
YP_007002391.1 NC_019450_p137 hypothetical protein phrog_5289 unknown function unknown function 1 83011 83259
YP_007002416.1 NC_019450_p112 hypothetical protein phrog_221 metallo-phosphoesterase other 1 69629 70408
YP_007002505.1 NC_019450_p23 hypothetical protein phrog_944 membrane protein moron, auxiliary metabolic gene and host takeover -1 11902 12309
YP_007002392.1 NC_019450_p136 hypothetical protein phrog_6871 unknown function unknown function 1 82727 83014
YP_007002453.1 NC_019450_p75 endolysin phrog_2860 endolysin head and packaging 1 49263 49823
YP_007002476.1 NC_019450_p52 Major capsid protein phrog_29 major head protein head and packaging 1 30191 31225
YP_007002501.1 NC_019450_p27 hypothetical protein phrog_6781 unknown function unknown function -1 13386 13817
YP_007002426.1 NC_019450_p102 hypothetical protein phrog_2544 unknown function unknown function 1 65033 66037
YP_007002462.1 NC_019450_p66 hypothetical protein phrog_349 virion structural protein head and packaging 1 40640 40996
YP_007002446.1 NC_019450_p82 hypothetical protein phrog_6945 unknown function unknown function -1 51986 52795
YP_007002410.1 NC_019450_p118 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 72541 73488
YP_007002438.1 NC_019450_p90 hypothetical protein phrog_3754 unknown function unknown function 1 55267 55752
YP_007002459.1 NC_019450_p69 hypothetical protein phrog_120 baseplate wedge subunit tail 1 42658 43029
YP_007003115.1 NC_019450_p139 hypothetical protein phrog_2267 unknown function unknown function 1 83458 83766
YP_007002523.1 NC_019450_p5 hypothetical protein phrog_7262 unknown function unknown function -1 1996 2400
YP_007002490.1 NC_019450_p38 hypothetical protein phrog_6991 unknown function unknown function -1 18810 19088
YP_007002504.1 NC_019450_p24 hypothetical protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 12306 12581
YP_007002497.1 NC_019450_p31 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 15464 16672
YP_007002461.1 NC_019450_p67 hypothetical protein phrog_196 baseplate hub tail 1 40993 41910
YP_007002477.1 NC_019450_p51 hypothetical protein phrog_49 head decoration head and packaging 1 29736 30146
YP_007002516.1 NC_019450_p12 hypothetical protein phrog_3360 unknown function unknown function -1 5083 5586
YP_007002525.1 NC_019450_p3 hypothetical protein phrog_8631 unknown function unknown function 1 1517 1675
YP_007002429.1 NC_019450_p99 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 60815 63529
YP_007002498.1 NC_019450_p30 hypothetical protein phrog_2686 unknown function unknown function -1 14987 15451
YP_007002513.1 NC_019450_p15 hypothetical protein phrog_6391 unknown function unknown function -1 6852 7001
YP_007002535.1 NC_019450_p151 hypothetical protein phrog_3303 unknown function unknown function 1 87862 88443
YP_007002529.1 NC_019450_p159 hypothetical protein phrog_11201 unknown function unknown function 1 91625 91891
YP_007002414.1 NC_019450_p114 hypothetical protein phrog_6873 unknown function unknown function 1 70615 70821
YP_007002441.1 NC_019450_p87 hypothetical protein singleton unknown function unknown function -1 54607 54750
YP_007002432.1 NC_019450_p96 hypothetical protein phrog_6115 unknown function unknown function 1 58411 58656
YP_007002421.1 NC_019450_p107 hypothetical protein phrog_5822 unknown function unknown function 1 68222 68620
YP_007002408.1 NC_019450_p120 ribonucleoside-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 73865 74911
YP_007002488.1 NC_019450_p40 hypothetical protein phrog_343 unknown function unknown function -1 19584 19877
YP_007002474.1 NC_019450_p54 RNA polymerase phrog_222 tail completion or Neck1 protein connector 1 31789 32202
YP_007002506.1 NC_019450_p22 RNA ligase/tail attachment protein phrog_562 RNA ligase and tail fiber protein attachment catalyst tail -1 10973 11890
YP_007002427.1 NC_019450_p101 hypothetical protein phrog_6824 unknown function unknown function 1 64215 64931
YP_007002452.1 NC_019450_p76 hypothetical protein phrog_5847 holin lysis 1 49841 50080
YP_007002458.1 NC_019450_p70 baseplate component phrog_6 baseplate wedge subunit tail 1 43031 44494
YP_007002483.1 NC_019450_p45 hypothetical protein phrog_3900 unknown function unknown function 1 22328 22651
YP_007002540.1 NC_019450_p146 hypothetical protein phrog_6818 unknown function unknown function 1 86330 86524