Genomic map of Clostridium phage phiCP26F (NC_019496)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019496
Definition
Clostridium phage phiCP26F, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
39188
Host Name
Clostridium perfringens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
30.26
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007004031.1 NC_019496_p45 hypothetical protein phrog_27657 unknown function unknown function 1 35196 35441
YP_007003999.1 NC_019496_p13 hypothetical protein phrog_1236 head protein head and packaging 1 13595 14065
YP_007003989.1 NC_019496_p3 hypothetical protein phrog_5839 unknown function unknown function 1 1687 2058
YP_007004004.1 NC_019496_p18 phage tail tape measure protein phrog_991 tail length tape measure protein tail 1 16074 18416
YP_007004006.1 NC_019496_p20 phage tail component phrog_33 distal tail protein Dit tail 1 19230 19925
YP_007004028.1 NC_019496_p42 hypothetical protein phrog_16715 unknown function unknown function 1 33866 34033
YP_007003993.1 NC_019496_p7 hypothetical protein phrog_16552 unknown function unknown function -1 6804 6929
YP_007004005.1 NC_019496_p19 prophage antirepressor phrog_463 anti-repressor transcription regulation 1 18501 19172
YP_007004020.1 NC_019496_p34 hypothetical protein phrog_18552 unknown function unknown function 1 29409 29660
YP_007004012.1 NC_019496_p26 hypothetical protein phrog_19685 unknown function unknown function 1 27327 27500
YP_007003996.1 NC_019496_p10 phage minor structural protein GP20 phrog_194 head scaffolding protein head and packaging 1 9112 9702
YP_007004022.1 NC_019496_p36 hypothetical protein phrog_17454 unknown function unknown function 1 30477 30713
YP_007003994.1 NC_019496_p8 hypothetical protein phrog_16621 unknown function unknown function 1 7054 7182
YP_007004003.1 NC_019496_p17 hypothetical protein phrog_18646 unknown function unknown function 1 15421 15768
YP_007004011.1 NC_019496_p25 phage anti-repressor protein phrog_14211 anti-repressor transcription regulation 1 26526 27230
YP_007004033.1 NC_019496_p47 hypothetical protein phrog_2245 nucleoside triphosphate pyrophosphohydrolase other 1 37747 38076
YP_007004035.1 NC_019496_p49 hypothetical protein phrog_17705 unknown function unknown function 1 38578 39186
YP_007004034.1 NC_019496_p48 hypothetical protein phrog_18244 unknown function unknown function 1 38077 38292
YP_007003990.1 NC_019496_p4 phage portal protein phrog_64 portal protein head and packaging 1 2060 3415
YP_007004023.1 NC_019496_p37 hypothetical protein phrog_17879 unknown function unknown function 1 30706 31233
YP_007004014.1 NC_019496_p28 hypothetical protein phrog_17096 unknown function unknown function 1 27729 27902
YP_007003997.1 NC_019496_p11 P22 coat protein 5 phrog_267 major head protein head and packaging 1 9725 10555
YP_007003991.1 NC_019496_p5 hypothetical protein phrog_419 unknown function unknown function 1 3454 3717
YP_007004017.1 NC_019496_p31 hypothetical protein phrog_27146 unknown function unknown function 1 28293 28487
YP_007003995.1 NC_019496_p9 P-loop ATPase-like protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 7196 8455
YP_007004009.1 NC_019496_p23 small integral membrane protein phrog_297 holin lysis 1 25285 25512
YP_007004021.1 NC_019496_p35 hypothetical protein phrog_63 anti-repressor Ant transcription regulation 1 29662 30408
YP_007004015.1 NC_019496_p29 hypothetical protein phrog_9584 unknown function unknown function 1 27892 28038
YP_007004016.1 NC_019496_p30 hypothetical protein phrog_18689 unknown function unknown function 1 28031 28291
YP_007004024.1 NC_019496_p38 hypothetical protein phrog_19908 unknown function unknown function 1 31290 31421
YP_007003987.1 NC_019496_p1 hypothetical protein phrog_606 terminase small subunit head and packaging 1 79 426
YP_007004026.1 NC_019496_p40 ERF superfamily protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32714 33304
YP_007003992.1 NC_019496_p6 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5324 5947
YP_007004001.1 NC_019496_p15 hypothetical protein phrog_17405 head protein head and packaging 1 14431 14796
YP_007004013.1 NC_019496_p27 hypothetical protein phrog_17736 unknown function unknown function 1 27484 27726
YP_007003998.1 NC_019496_p12 hypothetical protein phrog_23208 virion structural protein head and packaging 1 12607 13593
YP_007004000.1 NC_019496_p14 hypothetical protein phrog_17977 unknown function unknown function 1 14059 14394
YP_007004008.1 NC_019496_p22 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis 1 24635 25273
YP_007004029.1 NC_019496_p43 alternative thymidylate synthase-like protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 34033 34695
YP_007004025.1 NC_019496_p39 hypothetical protein phrog_18368 unknown function unknown function 1 31946 32164
YP_007004032.1 NC_019496_p46 CHC2 zinc finger protein phrog_18098 unknown function unknown function 1 35837 36805
YP_007004002.1 NC_019496_p16 hypothetical protein phrog_885 major tail protein tail 1 14808 15407
YP_007004027.1 NC_019496_p41 hypothetical protein phrog_3490 ERCC4-type nuclease DNA, RNA and nucleotide metabolism 1 33304 33873
YP_007004019.1 NC_019496_p33 hypothetical protein phrog_17646 unknown function unknown function 1 29073 29294
YP_007004030.1 NC_019496_p44 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 34813 35184
YP_007004018.1 NC_019496_p32 hypothetical protein phrog_18566 unknown function unknown function 1 28942 29067
YP_007004010.1 NC_019496_p24 hypothetical protein phrog_1193 hemolysin other 1 25513 25773
YP_007003988.1 NC_019496_p2 phage terminase large subunit phrog_18557 terminase large subunit head and packaging 1 1409 1675
YP_007004007.1 NC_019496_p21 hydrolase-like protein phrog_7043 tail protein tail 1 21686 22750