| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_019504 |
Definition |
Erwinia phage vB_EamM-Y2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Chaseviridae; Loessnervirus; Erwinia virus Y2. |
DB of origin |
REFSEQ |
Length |
56621 |
Host Name |
Erwinia amylovora |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
44.22 |
Number of singletons |
31 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007004712.1 | NC_019504_p62 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 29210 | 31219 |
| YP_007004690.1 | NC_019504_p40 | hypothetical protein | phrog_1026 | Rz-like spanin | lysis | 1 | 16228 | 16500 |
| YP_007004717.1 | NC_019504_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34283 | 34555 |
| YP_007004682.1 | NC_019504_p32 | hypothetical protein | phrog_17371 | unknown function | unknown function | 1 | 13218 | 13547 |
| YP_007004695.1 | NC_019504_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17644 | 17808 |
| YP_007004653.1 | NC_019504_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2677 | 2856 |
| YP_007004737.1 | NC_019504_p87 | holin | phrog_126 | holin/anti-holin | lysis | 1 | 52614 | 52955 |
| YP_007004680.1 | NC_019504_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12540 | 13025 |
| YP_007004736.1 | NC_019504_p86 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51964 | 52596 |
| YP_007004740.1 | NC_019504_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53687 | 53785 |
| YP_007004660.1 | NC_019504_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4383 | 4568 |
| YP_007004725.1 | NC_019504_p75 | hypothetical protein | phrog_11820 | tail assembly chaperone | tail | 1 | 39311 | 39775 |
| YP_007004709.1 | NC_019504_p59 | hypothetical protein | phrog_24684 | unknown function | unknown function | 1 | 28280 | 28672 |
| YP_007004729.1 | NC_019504_p79 | hypothetical protein | phrog_16481 | virion structural protein | head and packaging | 1 | 45754 | 46119 |
| YP_007004721.1 | NC_019504_p71 | hypothetical protein | phrog_11887 | head protein | head and packaging | 1 | 36491 | 36853 |
| YP_007004652.1 | NC_019504_p2 | hypothetical protein | phrog_33342 | unknown function | unknown function | 1 | 2485 | 2577 |
| YP_007004662.1 | NC_019504_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4855 | 5166 |
| YP_007004694.1 | NC_019504_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17383 | 17583 |
| YP_007004699.1 | NC_019504_p49 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 19376 | 21139 |
| YP_007004672.1 | NC_019504_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8939 | 9292 |
| YP_007004651.1 | NC_019504_p1 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 225 | 2120 |
| YP_007004684.1 | NC_019504_p34 | hypothetical protein | phrog_13087 | unknown function | unknown function | 1 | 13815 | 14492 |
| YP_007004657.1 | NC_019504_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3746 | 3961 |
| YP_007004730.1 | NC_019504_p80 | baseplate assembly protein | phrog_11 | baseplate spike | tail | 1 | 46112 | 46882 |
| YP_007004701.1 | NC_019504_p51 | hypothetical protein | phrog_24945 | unknown function | unknown function | 1 | 23375 | 23626 |
| YP_007004685.1 | NC_019504_p35 | hypothetical protein | phrog_17419 | unknown function | unknown function | 1 | 14629 | 14991 |
| YP_007004733.1 | NC_019504_p83 | hypothetical protein | phrog_587 | structural protein | head and packaging | 1 | 48403 | 49050 |
| YP_007004738.1 | NC_019504_p88 | endolysin | phrog_938 | endolysin | lysis | 1 | 52965 | 53498 |
| YP_007004707.1 | NC_019504_p57 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 27558 | 28007 |
| YP_007004675.1 | NC_019504_p25 | hypothetical protein | phrog_24715 | unknown function | unknown function | 1 | 10035 | 10358 |
| YP_007004670.1 | NC_019504_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7916 | 8686 |
| YP_007004713.1 | NC_019504_p63 | hypothetical protein | phrog_12735 | unknown function | unknown function | 1 | 31222 | 31410 |
| YP_007004708.1 | NC_019504_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28030 | 28287 |
| YP_007004663.1 | NC_019504_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5442 | 5630 |
| YP_007004667.1 | NC_019504_p17 | hypothetical protein | phrog_2340 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6349 | 6858 |
| YP_007004711.1 | NC_019504_p61 | hypothetical protein | phrog_21735 | unknown function | unknown function | 1 | 29029 | 29217 |
| YP_007004706.1 | NC_019504_p56 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 26956 | 27558 |
| YP_007004731.1 | NC_019504_p81 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 46882 | 47241 |
| YP_007004724.1 | NC_019504_p74 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 38833 | 39288 |
| YP_007004693.1 | NC_019504_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17240 | 17428 |
| YP_007004700.1 | NC_019504_p50 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 21436 | 23373 |
| YP_007004692.1 | NC_019504_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16918 | 17016 |
| YP_007004710.1 | NC_019504_p60 | hypothetical protein | phrog_18523 | unknown function | unknown function | 1 | 28617 | 28970 |
| YP_007004686.1 | NC_019504_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15127 | 15282 |
| YP_007004697.1 | NC_019504_p47 | hypothetical protein | phrog_20565 | unknown function | unknown function | 1 | 18458 | 18709 |
| YP_007004705.1 | NC_019504_p55 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 26192 | 26956 |
| YP_007004683.1 | NC_019504_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13547 | 13831 |
| YP_007004673.1 | NC_019504_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9252 | 9620 |
| YP_007004716.1 | NC_019504_p66 | hypothetical protein | phrog_563 | virion structural protein | head and packaging | 1 | 33783 | 34259 |
| YP_007004666.1 | NC_019504_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6129 | 6326 |
| YP_007004654.1 | NC_019504_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2915 | 3025 |
| YP_007004739.1 | NC_019504_p89 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53498 | 53674 |
| YP_007004715.1 | NC_019504_p65 | hypothetical protein | phrog_530 | head maturation protease | head and packaging | 1 | 32711 | 33772 |
| YP_007004704.1 | NC_019504_p54 | hypothetical protein | phrog_1985 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 25677 | 26195 |
| YP_007004718.1 | NC_019504_p68 | major capsid protein | phrog_264 | major head protein | head and packaging | 1 | 34619 | 35629 |
| YP_007004669.1 | NC_019504_p19 | hypothetical protein | phrog_20048 | unknown function | unknown function | 1 | 7343 | 7774 |
| YP_007004691.1 | NC_019504_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16654 | 16896 |
| YP_007004727.1 | NC_019504_p77 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 43740 | 44843 |
| YP_007004703.1 | NC_019504_p53 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 24618 | 25625 |
| YP_007004702.1 | NC_019504_p52 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 23653 | 24519 |
| YP_007004677.1 | NC_019504_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10782 | 11051 |
| YP_007004734.1 | NC_019504_p84 | hypothetical protein | phrog_8147 | tail fiber protein | tail | 1 | 49047 | 50546 |
| YP_007004661.1 | NC_019504_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4572 | 4868 |
| YP_007004658.1 | NC_019504_p8 | hypothetical protein | phrog_18131 | unknown function | unknown function | 1 | 3961 | 4212 |
| YP_007004664.1 | NC_019504_p14 | hypothetical protein | phrog_18403 | unknown function | unknown function | 1 | 5627 | 5923 |
| YP_007004689.1 | NC_019504_p39 | hypothetical protein | phrog_6022 | unknown function | unknown function | 1 | 15901 | 16146 |
| YP_007004719.1 | NC_019504_p69 | hypothetical protein | phrog_14310 | unknown function | unknown function | 1 | 35685 | 36113 |
| YP_007004676.1 | NC_019504_p26 | hypothetical protein | phrog_465 | endolysin | lysis | 1 | 10355 | 10753 |
| YP_007004687.1 | NC_019504_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15308 | 15415 |
| YP_007004735.1 | NC_019504_p85 | hypothetical protein | phrog_8147 | tail fiber protein | tail | 1 | 50555 | 51952 |
| YP_007004723.1 | NC_019504_p73 | hypothetical protein | phrog_205 | tail sheath | tail | 1 | 37370 | 38821 |
| YP_007004732.1 | NC_019504_p82 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | 1 | 47229 | 48395 |
| YP_007004720.1 | NC_019504_p70 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 36117 | 36494 |
| YP_007004655.1 | NC_019504_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3263 | 3463 |
| YP_007004722.1 | NC_019504_p72 | hypothetical protein | phrog_12771 | tail completion | connector | 1 | 36854 | 37366 |
| YP_007004671.1 | NC_019504_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8774 | 8938 |
| YP_007004678.1 | NC_019504_p28 | hypothetical protein | phrog_14321 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | 1 | 11055 | 11657 |
| YP_007004665.1 | NC_019504_p15 | hypothetical protein | phrog_3474 | unknown function | unknown function | 1 | 5925 | 6104 |
| YP_007004668.1 | NC_019504_p18 | ssDNA binding protein | phrog_7364 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 6969 | 7340 |
| YP_007004688.1 | NC_019504_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15601 | 15750 |
| YP_007004741.1 | NC_019504_p91 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 54238 | 56133 |
| YP_007004728.1 | NC_019504_p78 | hypothetical protein | phrog_17031 | tail protein | tail | 1 | 44843 | 45757 |
| YP_007004698.1 | NC_019504_p48 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 18709 | 19362 |
| YP_007004674.1 | NC_019504_p24 | hypothetical protein | phrog_31639 | unknown function | unknown function | 1 | 9802 | 10044 |
| YP_007004656.1 | NC_019504_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3460 | 3759 |
| YP_007004714.1 | NC_019504_p64 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 31411 | 32718 |
| YP_007004742.1 | NC_019504_p92 | hypothetical protein | phrog_33342 | unknown function | unknown function | 1 | 56498 | 56590 |
| YP_007004726.1 | NC_019504_p76 | tail fiber | phrog_19855 | virion structural protein | head and packaging | 1 | 39951 | 43670 |
| YP_007004681.1 | NC_019504_p31 | hypothetical protein | phrog_21299 | unknown function | unknown function | 1 | 13022 | 13237 |
| YP_007004679.1 | NC_019504_p29 | hypothetical protein | phrog_2652 | unknown function | unknown function | 1 | 11623 | 11910 |
| YP_007004659.1 | NC_019504_p9 | hypothetical protein | phrog_23678 | unknown function | unknown function | 1 | 4209 | 4379 |
| YP_007004696.1 | NC_019504_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17872 | 18471 |