| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_019509 |
Definition |
Cronobacter phage ESP2949-1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Tunavirinae. |
DB of origin |
REFSEQ |
Length |
49116 |
Host Name |
Cronobacter sakazakii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
50.09 |
Number of singletons |
4 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007005422.1 | NC_019509_p43 | hypothetical protein | phrog_1265 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 43655 | 44620 |
| YP_007005399.1 | NC_019509_p20 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | -1 | 14613 | 15128 |
| YP_007005423.1 | NC_019509_p44 | tail fiber protein | phrog_31 | central tail fiber J | tail | -1 | 44622 | 48092 |
| YP_007005412.1 | NC_019509_p33 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 31645 | 32787 |
| YP_007005400.1 | NC_019509_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18627 | 19352 |
| YP_007005383.1 | NC_019509_p4 | tail tape-measure protein | phrog_24 | tail length tape measure protein | tail | -1 | 1545 | 4253 |
| YP_007005380.1 | NC_019509_p1 | minor tail protein | phrog_2635 | tail protein | tail | -1 | 1 | 371 |
| YP_007005388.1 | NC_019509_p9 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | -1 | 6050 | 6400 |
| YP_007005389.1 | NC_019509_p10 | hypothetical protein | phrog_161 | head closure Hc1 | connector | -1 | 6483 | 6854 |
| YP_007005418.1 | NC_019509_p39 | tail fiber | phrog_5481 | tail fiber protein | tail | 1 | 38767 | 40635 |
| YP_007005405.1 | NC_019509_p26 | site-specific DNA methylase | phrog_757 | DNA methyltransferase | other | 1 | 26681 | 27379 |
| YP_007005411.1 | NC_019509_p32 | endolysin | phrog_7 | endolysin | lysis | -1 | 30747 | 31256 |
| YP_007005407.1 | NC_019509_p28 | hypothetical protein | phrog_2684 | unknown function | unknown function | 1 | 27696 | 28109 |
| YP_007005413.1 | NC_019509_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31780 | 32352 |
| YP_007005403.1 | NC_019509_p24 | polynucleotide kinase | phrog_415 | polynucleotide kinase | other | -1 | 22633 | 23118 |
| YP_007005414.1 | NC_019509_p35 | Dam methylase | phrog_111 | DNA methyltransferase | other | -1 | 33651 | 34361 |
| YP_007005401.1 | NC_019509_p22 | ATP-binding protein | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 18693 | 19313 |
| YP_007005382.1 | NC_019509_p3 | minor tail protein | phrog_14 | minor tail protein | tail | -1 | 1192 | 1545 |
| YP_007005393.1 | NC_019509_p14 | hypothetical protein | phrog_1989 | unknown function | unknown function | -1 | 8713 | 9213 |
| YP_007005424.1 | NC_019509_p45 | tail assembly protein | phrog_32 | tail assembly protein | tail | -1 | 48167 | 48766 |
| YP_007005394.1 | NC_019509_p15 | hypothetical protein | phrog_1989 | unknown function | unknown function | -1 | 9269 | 9760 |
| YP_007005420.1 | NC_019509_p41 | RecT | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 41139 | 41798 |
| YP_007005417.1 | NC_019509_p38 | DNA primase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 37736 | 38680 |
| YP_007005384.1 | NC_019509_p5 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | -1 | 4608 | 4928 |
| YP_007005385.1 | NC_019509_p6 | major tail protein | phrog_584 | major tail protein | tail | -1 | 4999 | 5655 |
| YP_007005391.1 | NC_019509_p12 | hypothetical protein | phrog_2716 | unknown function | unknown function | -1 | 7292 | 7621 |
| YP_007005395.1 | NC_019509_p16 | major head subunit precursor | phrog_530 | head maturation protease | head and packaging | -1 | 9818 | 10987 |
| YP_007005381.1 | NC_019509_p2 | minor tail protein | phrog_18 | minor tail protein | tail | -1 | 368 | 1150 |
| YP_007005404.1 | NC_019509_p25 | hypothetical protein | phrog_4841 | unknown function | unknown function | -1 | 23282 | 23794 |
| YP_007005410.1 | NC_019509_p31 | RzlA | phrog_1804 | Rz-like spanin | lysis | -1 | 30340 | 30750 |
| YP_007005419.1 | NC_019509_p40 | single-stranded DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 40669 | 41109 |
| YP_007005421.1 | NC_019509_p42 | exodeoxyribonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | -1 | 42144 | 43208 |
| YP_007005396.1 | NC_019509_p17 | phage head morphogenesis protein | phrog_324 | head morphogenesis | head and packaging | -1 | 10939 | 11706 |
| YP_007005416.1 | NC_019509_p37 | transcriptional regulator | phrog_2856 | transcriptional regulator | transcription regulation | 1 | 37221 | 37679 |
| YP_007005406.1 | NC_019509_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27280 | 27654 |
| YP_007005392.1 | NC_019509_p13 | hypothetical protein | phrog_264 | major head protein | head and packaging | -1 | 7670 | 8632 |
| YP_007005402.1 | NC_019509_p23 | hypothetical protein | phrog_28084 | unknown function | unknown function | -1 | 19396 | 20409 |
| YP_007005409.1 | NC_019509_p30 | hypothetical protein | phrog_2794 | unknown function | unknown function | 1 | 29818 | 30207 |
| YP_007005398.1 | NC_019509_p19 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | -1 | 13045 | 14613 |
| YP_007005415.1 | NC_019509_p36 | ATP-dependent helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 35091 | 37127 |
| YP_007005397.1 | NC_019509_p18 | portal protein | phrog_146 | portal protein | head and packaging | -1 | 11709 | 13001 |
| YP_007005390.1 | NC_019509_p11 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | -1 | 6851 | 7246 |
| YP_007005387.1 | NC_019509_p8 | hypothetical protein | phrog_179 | tail terminator | connector | -1 | 5659 | 6060 |
| YP_007005386.1 | NC_019509_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5215 | 5943 |
| YP_007005408.1 | NC_019509_p29 | hypothetical protein | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 28230 | 29813 |