| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_019510 |
Definition |
Erwinia phage vB_EamP-L1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Elunavirus; Erwinia virus L1. |
DB of origin |
REFSEQ |
Length |
39282 |
Host Name |
Erwinia amylovora |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
51.93 |
Number of singletons |
6 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007005473.1 | NC_019510_p49 | gp19.2 | singleton | unknown function | unknown function | 1 | 37496 | 37597 |
| YP_007005446.1 | NC_019510_p22 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 12875 | 14995 |
| YP_007005439.1 | NC_019510_p15 | endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9506 | 9958 |
| YP_007005471.1 | NC_019510_p47 | gp18.9 | phrog_5004 | unknown function | unknown function | 1 | 36035 | 36715 |
| YP_007005453.1 | NC_019510_p29 | gp6.7 | phrog_1391 | unknown function | unknown function | 1 | 17148 | 17384 |
| YP_007005425.1 | NC_019510_p1 | gp0.1 | singleton | unknown function | unknown function | 1 | 959 | 1138 |
| YP_007005463.1 | NC_019510_p39 | tail internal virion protein B | phrog_805 | internal virion protein | head and packaging | 1 | 25595 | 26185 |
| YP_007005442.1 | NC_019510_p18 | DNA helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 10676 | 12196 |
| YP_007005433.1 | NC_019510_p9 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 6155 | 7165 |
| YP_007005462.1 | NC_019510_p38 | internal virion protein A | phrog_308 | internal virion protein | head and packaging | 1 | 25179 | 25592 |
| YP_007005431.1 | NC_019510_p7 | gp1.05 | phrog_8103 | unknown function | unknown function | 1 | 5202 | 5702 |
| YP_007005436.1 | NC_019510_p12 | gp1.65 | phrog_4521 | unknown function | unknown function | 1 | 8034 | 8456 |
| YP_007005429.1 | NC_019510_p5 | protein kinase | singleton | unknown function | unknown function | 1 | 1657 | 2352 |
| YP_007005444.1 | NC_019510_p20 | gp4.3 | phrog_1950 | unknown function | unknown function | 1 | 12310 | 12522 |
| YP_007005464.1 | NC_019510_p40 | internal virion protein C | phrog_1339 | internal virion protein | head and packaging | 1 | 26197 | 28458 |
| YP_007005440.1 | NC_019510_p16 | lysozyme | phrog_822 | amidase | lysis | 1 | 9958 | 10407 |
| YP_007005428.1 | NC_019510_p4 | gp0.65 | singleton | unknown function | unknown function | 1 | 1419 | 1538 |
| YP_007005454.1 | NC_019510_p30 | gp7.3 | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 17371 | 17643 |
| YP_007005432.1 | NC_019510_p8 | gp1.07 | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | 1 | 5772 | 6080 |
| YP_007005474.1 | NC_019510_p50 | gp19.3 | phrog_8173 | unknown function | unknown function | 1 | 37913 | 38041 |
| YP_007005447.1 | NC_019510_p23 | gp5.5 | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 15012 | 15296 |
| YP_007005434.1 | NC_019510_p10 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7095 | 7571 |
| YP_007005460.1 | NC_019510_p36 | gp13.5 | phrog_2914 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 22400 | 22735 |
| YP_007005468.1 | NC_019510_p44 | terminase small subunit | phrog_1351 | terminase small subunit | head and packaging | 1 | 35209 | 35466 |
| YP_007005458.1 | NC_019510_p34 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 20466 | 21503 |
| YP_007005435.1 | NC_019510_p11 | gp1.6 | phrog_1777 | unknown function | unknown function | 1 | 7762 | 8034 |
| YP_007005466.1 | NC_019510_p42 | EPS depolymerase | phrog_4250 | EPS depolymerase | tail | 1 | 32533 | 35004 |
| YP_007005467.1 | NC_019510_p43 | holin | phrog_920 | holin | lysis | 1 | 35010 | 35216 |
| YP_007005456.1 | NC_019510_p32 | capsid assembly protein | phrog_1052 | head assembly | head and packaging | 1 | 19332 | 20279 |
| YP_007005469.1 | NC_019510_p45 | endopeptidase | phrog_1327 | Rz-like spanin | lysis | 1 | 35569 | 36033 |
| YP_007005450.1 | NC_019510_p26 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15788 | 16696 |
| YP_007005448.1 | NC_019510_p24 | gp5.7 | phrog_1334 | unknown function | unknown function | 1 | 15293 | 15502 |
| YP_007005449.1 | NC_019510_p25 | gp5.8 | phrog_18166 | unknown function | unknown function | 1 | 15499 | 15795 |
| YP_007005475.1 | NC_019510_p51 | gp19.5 | phrog_2193 | unknown function | unknown function | 1 | 38749 | 38895 |
| YP_007005427.1 | NC_019510_p3 | gp0.6 | singleton | unknown function | unknown function | 1 | 1239 | 1373 |
| YP_007005430.1 | NC_019510_p6 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 2377 | 5079 |
| YP_007005470.1 | NC_019510_p46 | gp18.7 | phrog_4306 | Rz-like spanin | lysis | 1 | 35684 | 35938 |
| YP_007005457.1 | NC_019510_p33 | minor capsid protein | phrog_267 | major head protein | head and packaging | 1 | 20466 | 21634 |
| YP_007005455.1 | NC_019510_p31 | head-to-tail joining protein | phrog_449 | head-tail adaptor | connector | 1 | 17657 | 19267 |
| YP_007005461.1 | NC_019510_p37 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 22710 | 25109 |
| YP_007005426.1 | NC_019510_p2 | gp0.2 | singleton | unknown function | unknown function | 1 | 1138 | 1239 |
| YP_007005472.1 | NC_019510_p48 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 36727 | 38487 |
| YP_007005437.1 | NC_019510_p13 | bacterial RNAP inhibitor | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 8569 | 8724 |
| YP_007005443.1 | NC_019510_p19 | gp4.2 | phrog_5140 | unknown function | unknown function | 1 | 11919 | 12251 |
| YP_007005465.1 | NC_019510_p41 | internal virion protein D | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 28476 | 32471 |
| YP_007005452.1 | NC_019510_p28 | gp6.5 | phrog_1447 | unknown function | unknown function | 1 | 16898 | 17143 |
| YP_007005451.1 | NC_019510_p27 | gp6.3 | phrog_5008 | unknown function | unknown function | 1 | 16684 | 16797 |
| YP_007005445.1 | NC_019510_p21 | gp4.5 | phrog_2254 | unknown function | unknown function | 1 | 12534 | 12815 |
| YP_007005441.1 | NC_019510_p17 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 10478 | 12196 |
| YP_007005438.1 | NC_019510_p14 | ssDNA binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8802 | 9506 |
| YP_007005459.1 | NC_019510_p35 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 21796 | 22380 |