Genomic map of Escherichia phage phiKT (NC_019520)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019520
Definition
Escherichia phage phiKT, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Ermolevavirus; Escherichia virus PhiKT.
DB of origin
REFSEQ
Length
42608
Host Name
Escherichia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
31
%GC
51.58
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007006609.1 NC_019520_p26 DNA maturase B phrog_38 terminase large subunit head and packaging 1 34288 36093
YP_007006594.1 NC_019520_p11 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other 1 11223 11942
YP_007006584.1 NC_019520_p1 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 2105 2923
YP_007006592.1 NC_019520_p9 exonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 9736 10215
YP_007006587.1 NC_019520_p4 replication initiation protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism 1 4764 5057
YP_007006591.1 NC_019520_p8 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 8754 9722
YP_007006585.1 NC_019520_p2 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 3027 4193
YP_007006602.1 NC_019520_p19 tail tubular protein B phrog_457 tail protein tail 1 21090 23720
YP_007006613.1 NC_019520_p30 phage tail tape measure protein phrog_2226 SAM-dependent methyltransferase other 1 39756 40250
YP_007006588.1 NC_019520_p5 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 5057 7450
YP_007006612.1 NC_019520_p29 phage holin protein phrog_175 holin lysis 1 37282 37665
YP_007006605.1 NC_019520_p22 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 26889 31091
YP_007006597.1 NC_019520_p14 hypothetical protein phrog_37045 unknown function unknown function 1 14896 15330
YP_007006606.1 NC_019520_p23 hypothetical membrane fusion protein singleton unknown function unknown function 1 31063 31173
YP_007006596.1 NC_019520_p13 hypothetical protein singleton unknown function unknown function 1 14529 14924
YP_007006600.1 NC_019520_p17 major capsid protein phrog_267 major head protein head and packaging 1 19428 20411
YP_007006604.1 NC_019520_p21 hypothetical protein phrog_3883 internal virion protein head and packaging 1 24560 26869
YP_007006595.1 NC_019520_p12 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 11896 14367
YP_007006611.1 NC_019520_p28 hypothetical OmpW family transmembrane protein phrog_35982 unknown function unknown function 1 37102 37272
YP_007006614.1 NC_019520_p31 hypothetical protein phrog_10124 unknown function unknown function 1 40252 40500
YP_007006599.1 NC_019520_p16 scaffold-like protein phrog_1018 head scaffolding protein head and packaging 1 18458 19378
YP_007006586.1 NC_019520_p3 deoxyribonucleoside 5'-monophosphate phosphatase phrog_318 deoxyribonucleoside 5' monophosphate phosphatase other 1 4190 4777
YP_007006593.1 NC_019520_p10 hypothetical protein phrog_221 metallo-phosphoesterase other 1 10205 11182
YP_007006598.1 NC_019520_p15 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 16895 18448
YP_007006607.1 NC_019520_p24 tail fiber protein phrog_13173 tail fiber protein tail 1 31133 33916
YP_007006590.1 NC_019520_p7 hypothetical protein phrog_862 unknown function unknown function 1 7814 8752
YP_007006589.1 NC_019520_p6 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7435 7821
YP_007006608.1 NC_019520_p25 hypothetical protein phrog_34686 unknown function unknown function 1 33926 34297
YP_007006610.1 NC_019520_p27 phage endolysin phrog_10457 endolysin lysis 1 36780 37109
YP_007006603.1 NC_019520_p20 hypothetical protein phrog_37425 unknown function unknown function 1 23723 24550
YP_007006601.1 NC_019520_p18 tail tubular protein A phrog_446 tail protein tail 1 20472 21086