Genomic map of Clostridium phage phi24R (NC_019523)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019523
Definition
Clostridium phage phi24R, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
18919
Host Name
Clostridium perfringens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
22
%GC
27.8
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007006984.1 NC_019523_p7 hypothetical protein phrog_14578 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 5002 5583
YP_007006979.1 NC_019523_p2 hypothetical protein phrog_28736 unknown function unknown function 1 458 613
YP_007006992.1 NC_019523_p15 hypothetical protein phrog_4898 holin lysis 1 11822 11995
YP_007006990.1 NC_019523_p13 tail protein phrog_16740 tail protein tail 1 9933 11180
YP_007006996.1 NC_019523_p19 hypothetical protein singleton unknown function unknown function 1 13863 14228
YP_007006983.1 NC_019523_p6 DNA encapsidation protein phrog_2150 terminase head and packaging 1 3872 4894
YP_007006988.1 NC_019523_p11 hypothetical protein phrog_2006 major head protein head and packaging 1 7392 8384
YP_007006993.1 NC_019523_p16 connector phrog_2038 upper collar connector connector 1 12025 12927
YP_007006982.1 NC_019523_p5 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 1561 3870
YP_007006986.1 NC_019523_p9 hypothetical protein phrog_29684 unknown function unknown function 1 6019 6276
YP_007006994.1 NC_019523_p17 lower collar protein phrog_5472 lower collar tail 1 12887 13591
YP_007006995.1 NC_019523_p18 hypothetical protein phrog_29468 unknown function unknown function 1 13603 13863
YP_007006987.1 NC_019523_p10 major head protein phrog_2006 major head protein head and packaging 1 6278 7378
YP_007006980.1 NC_019523_p3 hypothetical protein phrog_29355 unknown function unknown function 1 621 830
YP_007006991.1 NC_019523_p14 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis 1 11184 11822
YP_007006978.1 NC_019523_p1 hypothetical protein phrog_918 unknown function unknown function 1 46 309
YP_007006985.1 NC_019523_p8 hypothetical protein phrog_28166 unknown function unknown function 1 5637 5873
YP_007006998.1 NC_019523_p21 pre-neck appendage phrog_17212 pre-neck appendage protein connector 1 16425 18254
YP_007006981.1 NC_019523_p4 hypothetical protein phrog_28144 unknown function unknown function 1 799 1539
YP_007006997.1 NC_019523_p20 zinc carboxypeptidase singleton unknown function unknown function 1 14444 16432
YP_007006989.1 NC_019523_p12 lysozyme-peptidase phrog_16615 peptidase other 1 8377 9942
YP_007006999.1 NC_019523_p22 hypothetical protein phrog_29298 unknown function unknown function -1 18269 18622