| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_019539 |
Definition |
Salmonella phage vB_SenS-Ent1 complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus. |
DB of origin |
REFSEQ |
Length |
42391 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
49.78 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007010493.1 | NC_019539_p40 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 32352 | 33776 |
| YP_007010496.1 | NC_019539_p43 | phage replicative helicase primase | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | -1 | 34716 | 36902 |
| YP_007010501.1 | NC_019539_p48 | hypothetical protein | phrog_4947 | unknown function | unknown function | 1 | 38843 | 39214 |
| YP_007010491.1 | NC_019539_p38 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 31468 | 32094 |
| YP_007010499.1 | NC_019539_p46 | hypothetical protein | phrog_18511 | unknown function | unknown function | 1 | 38359 | 38640 |
| YP_007010505.1 | NC_019539_p52 | lysozyme | phrog_7 | endolysin | lysis | 1 | 40285 | 40773 |
| YP_007010506.1 | NC_019539_p53 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 40958 | 41143 |
| YP_007010470.1 | NC_019539_p17 | structural protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 10751 | 11146 |
| YP_007010479.1 | NC_019539_p26 | hypothetical protein | phrog_4557 | unknown function | unknown function | 1 | 16290 | 16649 |
| YP_007010454.1 | NC_019539_p1 | phage terminase, small subunit | phrog_3064 | terminase | head and packaging | 1 | 88 | 594 |
| YP_007010457.1 | NC_019539_p4 | hypothetical protein | phrog_6095 | amidase | lysis | -1 | 3367 | 4017 |
| YP_007010487.1 | NC_019539_p34 | intein containing helicase precursor | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 25253 | 27718 |
| YP_007010469.1 | NC_019539_p16 | neck protein | phrog_161 | head closure Hc1 | connector | 1 | 10395 | 10754 |
| YP_007010486.1 | NC_019539_p33 | hypothetical protein | phrog_5915 | unknown function | unknown function | -1 | 25086 | 25256 |
| YP_007010459.1 | NC_019539_p6 | head decoration protein | phrog_3945 | Hoc-like head decoration | head and packaging | 1 | 5229 | 5687 |
| YP_007010511.1 | NC_019539_p58 | hypothetical protein | phrog_10134 | unknown function | unknown function | 1 | 42115 | 42345 |
| YP_007010504.1 | NC_019539_p51 | holin, class II | phrog_2508 | holin | lysis | 1 | 40017 | 40304 |
| YP_007010480.1 | NC_019539_p27 | tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 16642 | 18975 |
| YP_007010508.1 | NC_019539_p55 | hypothetical protein | phrog_4684 | unknown function | unknown function | 1 | 41295 | 41450 |
| YP_007010472.1 | NC_019539_p19 | major tail protein | phrog_290 | minor tail protein | tail | 1 | 11565 | 12734 |
| YP_007010495.1 | NC_019539_p42 | DNA-binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34483 | 34701 |
| YP_007010490.1 | NC_019539_p37 | intein-containing DNA polymerase precursor | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28312 | 31410 |
| YP_007010460.1 | NC_019539_p7 | hypothetical protein | phrog_2536 | Rz-like spanin | lysis | 1 | 6005 | 6391 |
| YP_007010485.1 | NC_019539_p32 | tailspike protein | phrog_1819 | tail spike protein | tail | 1 | 22913 | 24967 |
| YP_007010482.1 | NC_019539_p29 | hypothetical protein | phrog_396 | minor tail protein | tail | 1 | 19474 | 19989 |
| YP_007010467.1 | NC_019539_p14 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 9278 | 9787 |
| YP_007010474.1 | NC_019539_p21 | hypothetical protein | phrog_2452 | unknown function | unknown function | -1 | 13546 | 13776 |
| YP_007010509.1 | NC_019539_p56 | NinH-like protein | phrog_268 | unknown function | unknown function | 1 | 41447 | 41803 |
| YP_007010503.1 | NC_019539_p50 | hypothetical protein | phrog_2359 | holin | lysis | 1 | 39734 | 40015 |
| YP_007010484.1 | NC_019539_p31 | tail fibre protein | phrog_469 | tail protein | tail | 1 | 20342 | 22900 |
| YP_007010462.1 | NC_019539_p9 | scaffold protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 6585 | 7286 |
| YP_007010468.1 | NC_019539_p15 | neck protein | phrog_3614 | unknown function | unknown function | 1 | 9790 | 10395 |
| YP_007010455.1 | NC_019539_p2 | phage terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 584 | 1855 |
| YP_007010465.1 | NC_019539_p12 | Hoc protein | phrog_4069 | Hoc-like head decoration | head and packaging | 1 | 8699 | 9049 |
| YP_007010497.1 | NC_019539_p44 | uvsX-like protein | phrog_5169 | unknown function | unknown function | -1 | 36959 | 37192 |
| YP_007010475.1 | NC_019539_p22 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 13786 | 14286 |
| YP_007010494.1 | NC_019539_p41 | hypothetical protein | phrog_3127 | unknown function | unknown function | -1 | 33819 | 34349 |
| YP_007010476.1 | NC_019539_p23 | recombination endonuclease subunit protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 14302 | 15456 |
| YP_007010471.1 | NC_019539_p18 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 11146 | 11565 |
| YP_007010477.1 | NC_019539_p24 | imm immunity to superinfection membrane protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | -1 | 15519 | 15698 |
| YP_007010500.1 | NC_019539_p47 | hypothetical protein | phrog_3766 | unknown function | unknown function | 1 | 38637 | 38840 |
| YP_007010463.1 | NC_019539_p10 | major coat protein | phrog_247 | major head protein | head and packaging | 1 | 7290 | 8339 |
| YP_007010488.1 | NC_019539_p35 | hypothetical protein | phrog_4879 | unknown function | unknown function | -1 | 27715 | 27906 |
| YP_007010466.1 | NC_019539_p13 | hypothetical protein | phrog_4451 | unknown function | unknown function | 1 | 9086 | 9274 |
| YP_007010498.1 | NC_019539_p45 | DNA-binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 37189 | 37359 |
| YP_007010461.1 | NC_019539_p8 | hypothetical protein | phrog_5672 | Rz-like spanin | lysis | 1 | 6327 | 6500 |
| YP_007010510.1 | NC_019539_p57 | hypothetical protein | phrog_2531 | unknown function | unknown function | 1 | 41800 | 42099 |
| YP_007010464.1 | NC_019539_p11 | head fibre protein | phrog_4366 | head fiber protein | head and packaging | 1 | 8400 | 8687 |
| YP_007010489.1 | NC_019539_p36 | restriction endonuclease | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 27938 | 28225 |
| YP_007010481.1 | NC_019539_p28 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | 1 | 18977 | 19477 |
| YP_007010483.1 | NC_019539_p30 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 19986 | 20351 |
| YP_007010502.1 | NC_019539_p49 | hypothetical protein | phrog_1040 | peptidase HslV family | other | 1 | 39220 | 39654 |
| YP_007010507.1 | NC_019539_p54 | hypothetical protein | phrog_3002 | unknown function | unknown function | 1 | 41140 | 41298 |
| YP_007010473.1 | NC_019539_p20 | DNA-binding protein | phrog_63 | anti-repressor Ant | transcription regulation | -1 | 12763 | 13434 |
| YP_007010458.1 | NC_019539_p5 | head morphogenesis protein, SPP1family | phrog_241 | head morphogenesis | head and packaging | 1 | 4183 | 5226 |
| YP_007010492.1 | NC_019539_p39 | hypothetical protein | phrog_13603 | unknown function | unknown function | -1 | 32176 | 32352 |
| YP_007010456.1 | NC_019539_p3 | portal protein | phrog_145 | portal protein | head and packaging | 1 | 1868 | 3337 |
| YP_007010478.1 | NC_019539_p25 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 15868 | 16284 |