Genomic map of Salmonella phage Ent1 (NC_019539)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019539
Definition
Salmonella phage vB_SenS-Ent1 complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus.
DB of origin
REFSEQ
Length
42391
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
49.78
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007010493.1 NC_019539_p40 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 32352 33776
YP_007010496.1 NC_019539_p43 phage replicative helicase primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism -1 34716 36902
YP_007010501.1 NC_019539_p48 hypothetical protein phrog_4947 unknown function unknown function 1 38843 39214
YP_007010491.1 NC_019539_p38 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31468 32094
YP_007010499.1 NC_019539_p46 hypothetical protein phrog_18511 unknown function unknown function 1 38359 38640
YP_007010505.1 NC_019539_p52 lysozyme phrog_7 endolysin lysis 1 40285 40773
YP_007010506.1 NC_019539_p53 hypothetical protein phrog_2180 unknown function unknown function 1 40958 41143
YP_007010470.1 NC_019539_p17 structural protein phrog_169 tail completion or Neck1 protein connector 1 10751 11146
YP_007010479.1 NC_019539_p26 hypothetical protein phrog_4557 unknown function unknown function 1 16290 16649
YP_007010454.1 NC_019539_p1 phage terminase, small subunit phrog_3064 terminase head and packaging 1 88 594
YP_007010457.1 NC_019539_p4 hypothetical protein phrog_6095 amidase lysis -1 3367 4017
YP_007010487.1 NC_019539_p34 intein containing helicase precursor phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 25253 27718
YP_007010469.1 NC_019539_p16 neck protein phrog_161 head closure Hc1 connector 1 10395 10754
YP_007010486.1 NC_019539_p33 hypothetical protein phrog_5915 unknown function unknown function -1 25086 25256
YP_007010459.1 NC_019539_p6 head decoration protein phrog_3945 Hoc-like head decoration head and packaging 1 5229 5687
YP_007010511.1 NC_019539_p58 hypothetical protein phrog_10134 unknown function unknown function 1 42115 42345
YP_007010504.1 NC_019539_p51 holin, class II phrog_2508 holin lysis 1 40017 40304
YP_007010480.1 NC_019539_p27 tape measure protein phrog_1538 tail length tape measure protein tail 1 16642 18975
YP_007010508.1 NC_019539_p55 hypothetical protein phrog_4684 unknown function unknown function 1 41295 41450
YP_007010472.1 NC_019539_p19 major tail protein phrog_290 minor tail protein tail 1 11565 12734
YP_007010495.1 NC_019539_p42 DNA-binding protein phrog_3 transcriptional repressor transcription regulation 1 34483 34701
YP_007010490.1 NC_019539_p37 intein-containing DNA polymerase precursor phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28312 31410
YP_007010460.1 NC_019539_p7 hypothetical protein phrog_2536 Rz-like spanin lysis 1 6005 6391
YP_007010485.1 NC_019539_p32 tailspike protein phrog_1819 tail spike protein tail 1 22913 24967
YP_007010482.1 NC_019539_p29 hypothetical protein phrog_396 minor tail protein tail 1 19474 19989
YP_007010467.1 NC_019539_p14 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 9278 9787
YP_007010474.1 NC_019539_p21 hypothetical protein phrog_2452 unknown function unknown function -1 13546 13776
YP_007010509.1 NC_019539_p56 NinH-like protein phrog_268 unknown function unknown function 1 41447 41803
YP_007010503.1 NC_019539_p50 hypothetical protein phrog_2359 holin lysis 1 39734 40015
YP_007010484.1 NC_019539_p31 tail fibre protein phrog_469 tail protein tail 1 20342 22900
YP_007010462.1 NC_019539_p9 scaffold protein phrog_206 head scaffolding protein head and packaging 1 6585 7286
YP_007010468.1 NC_019539_p15 neck protein phrog_3614 unknown function unknown function 1 9790 10395
YP_007010455.1 NC_019539_p2 phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 584 1855
YP_007010465.1 NC_019539_p12 Hoc protein phrog_4069 Hoc-like head decoration head and packaging 1 8699 9049
YP_007010497.1 NC_019539_p44 uvsX-like protein phrog_5169 unknown function unknown function -1 36959 37192
YP_007010475.1 NC_019539_p22 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 13786 14286
YP_007010494.1 NC_019539_p41 hypothetical protein phrog_3127 unknown function unknown function -1 33819 34349
YP_007010476.1 NC_019539_p23 recombination endonuclease subunit protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 14302 15456
YP_007010471.1 NC_019539_p18 hypothetical protein phrog_179 tail terminator connector 1 11146 11565
YP_007010477.1 NC_019539_p24 imm immunity to superinfection membrane protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover -1 15519 15698
YP_007010500.1 NC_019539_p47 hypothetical protein phrog_3766 unknown function unknown function 1 38637 38840
YP_007010463.1 NC_019539_p10 major coat protein phrog_247 major head protein head and packaging 1 7290 8339
YP_007010488.1 NC_019539_p35 hypothetical protein phrog_4879 unknown function unknown function -1 27715 27906
YP_007010466.1 NC_019539_p13 hypothetical protein phrog_4451 unknown function unknown function 1 9086 9274
YP_007010498.1 NC_019539_p45 DNA-binding protein phrog_66 excisionase and transcriptional regulator integration and excision -1 37189 37359
YP_007010461.1 NC_019539_p8 hypothetical protein phrog_5672 Rz-like spanin lysis 1 6327 6500
YP_007010510.1 NC_019539_p57 hypothetical protein phrog_2531 unknown function unknown function 1 41800 42099
YP_007010464.1 NC_019539_p11 head fibre protein phrog_4366 head fiber protein head and packaging 1 8400 8687
YP_007010489.1 NC_019539_p36 restriction endonuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 27938 28225
YP_007010481.1 NC_019539_p28 hypothetical protein phrog_384 virion structural protein head and packaging 1 18977 19477
YP_007010483.1 NC_019539_p30 hypothetical protein phrog_329 minor tail protein tail 1 19986 20351
YP_007010502.1 NC_019539_p49 hypothetical protein phrog_1040 peptidase HslV family other 1 39220 39654
YP_007010507.1 NC_019539_p54 hypothetical protein phrog_3002 unknown function unknown function 1 41140 41298
YP_007010473.1 NC_019539_p20 DNA-binding protein phrog_63 anti-repressor Ant transcription regulation -1 12763 13434
YP_007010458.1 NC_019539_p5 head morphogenesis protein, SPP1family phrog_241 head morphogenesis head and packaging 1 4183 5226
YP_007010492.1 NC_019539_p39 hypothetical protein phrog_13603 unknown function unknown function -1 32176 32352
YP_007010456.1 NC_019539_p3 portal protein phrog_145 portal protein head and packaging 1 1868 3337
YP_007010478.1 NC_019539_p25 hypothetical protein phrog_313 Tail assembly chaperone tail 1 15868 16284