Genomic map of Enterobacteria phage mEpX1 (NC_019709)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019709
Definition
Enterobacteria phage mEpX1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Hendrixvirus.
DB of origin
REFSEQ
Length
41567
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
66
%GC
49.31
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007111655.1 NC_019709_p18 hypothetical protein phrog_5031 unknown function unknown function 1 13508 13732
YP_007111675.1 NC_019709_p38 hypothetical protein phrog_1871 unknown function unknown function -1 27537 27674
YP_007111690.1 NC_019709_p53 Roi protein phrog_63 anti-repressor Ant transcription regulation 1 35014 35739
YP_007111641.1 NC_019709_p4 head maturation protease phrog_80 head maturation protease head and packaging 1 3299 3976
YP_007111698.1 NC_019709_p61 hypothetical protein phrog_1136 unknown function unknown function 1 38978 39781
YP_007111645.1 NC_019709_p8 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5831 6280
YP_007111651.1 NC_019709_p14 tail length tape measure protein phrog_339 tail length tape measure protein tail 1 8386 11652
YP_007111653.1 NC_019709_p16 tail protein phrog_18 minor tail protein tail 1 11990 12748
YP_007111702.1 NC_019709_p65 HNH endonuclease phrog_5956 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40918 41181
YP_007111648.1 NC_019709_p11 tail assembly chaperone phrog_344 tail assembly chaperone tail 1 7423 7809
YP_007111654.1 NC_019709_p17 minor tail protein phrog_30 minor tail protein tail 1 12750 13460
YP_007111639.1 NC_019709_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 493 2007
YP_007111686.1 NC_019709_p49 hypothetical protein phrog_1165 unknown function unknown function 1 34051 34257
YP_007111682.1 NC_019709_p45 CII protein phrog_191 CII-like transcriptional activator transcription regulation 1 31621 31917
YP_007111662.1 NC_019709_p25 hypothetical protein singleton unknown function unknown function 1 20633 21064
YP_007111692.1 NC_019709_p55 endodeoxyribonuclease RusA phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 36026 36388
YP_007111679.1 NC_019709_p42 hypothetical protein phrog_9194 unknown function unknown function -1 29900 30379
YP_007111642.1 NC_019709_p5 major head subunit phrog_10 major head protein head and packaging 1 3979 5133
YP_007111638.1 NC_019709_p1 terminase small subunit phrog_5601 terminase small subunit head and packaging 1 1 486
YP_007111660.1 NC_019709_p23 Cor protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 19044 19277
YP_007111652.1 NC_019709_p15 minor tail protein phrog_14 minor tail protein tail 1 11655 11993
YP_007111670.1 NC_019709_p33 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism -1 25128 25568
YP_007111667.1 NC_019709_p30 hypothetical protein phrog_614 unknown function unknown function -1 24142 24624
YP_007111693.1 NC_019709_p56 NinH protein phrog_268 unknown function unknown function 1 36385 36573
YP_007111668.1 NC_019709_p31 hypothetical protein phrog_1117 unknown function unknown function -1 24621 24785
YP_007111664.1 NC_019709_p27 integrase phrog_1 integrase integration and excision 1 22204 23454
YP_007111695.1 NC_019709_p58 holin phrog_126 holin/anti-holin lysis 1 37627 37950
YP_007111703.1 NC_019709_p66 hypothetical protein phrog_10282 unknown function unknown function 1 41181 41384
YP_007111674.1 NC_019709_p37 hypothetical protein phrog_37822 unknown function unknown function -1 27300 27482
YP_007111659.1 NC_019709_p22 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 18298 18936
YP_007111647.1 NC_019709_p10 major tail subunit phrog_158 major tail protein tail 1 6684 7388
YP_007111681.1 NC_019709_p44 prophage antirepressor phrog_3 transcriptional repressor transcription regulation 1 31285 31503
YP_007111657.1 NC_019709_p20 central tail fiber J phrog_31 central tail fiber J tail 1 14443 17994
YP_007111689.1 NC_019709_p52 NinF protein phrog_672 unknown function unknown function 1 34851 35021
YP_007111643.1 NC_019709_p6 head-tail connector I phrog_40 head-tail adaptor Ad1 connector 1 5170 5496
YP_007111699.1 NC_019709_p62 hypothetical protein phrog_875 unknown function unknown function 1 39784 40041
YP_007111672.1 NC_019709_p35 hypothetical protein phrog_3486 unknown function unknown function -1 26502 26813
YP_007111676.1 NC_019709_p39 transcription regulatory protein phrog_5632 Nun-like transcription termination factor transcription regulation -1 27814 28146
YP_007111700.1 NC_019709_p63 hypothetical protein phrog_322 unknown function unknown function 1 40268 40639
YP_007111665.1 NC_019709_p28 hypothetical protein phrog_1553 excisionase integration and excision -1 23451 23648
YP_007111680.1 NC_019709_p43 prophage repressor phrog_4 transcriptional repressor transcription regulation -1 30529 31176
YP_007111649.1 NC_019709_p12 tail assembly chaperone phrog_337 tail protein tail 1 7818 8096
YP_007111683.1 NC_019709_p46 DNA replication protein O phrog_678 replication initiation O-like DNA, RNA and nucleotide metabolism 1 31950 32795
YP_007111694.1 NC_019709_p57 late gene regulator Q phrog_127 anti-termination protein Q-like transcription regulation 1 36570 37193
YP_007111687.1 NC_019709_p50 NinB recombinase phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 34265 34675
YP_007111644.1 NC_019709_p7 head-tail connector II phrog_25 head closure Hc1 connector 1 5496 5834
YP_007111658.1 NC_019709_p21 hypothetical protein phrog_557 outer membrane protein other 1 17996 18298
YP_007111669.1 NC_019709_p32 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation -1 24802 25116
YP_007111701.1 NC_019709_p64 hypothetical protein phrog_23132 unknown function unknown function 1 40743 40880
YP_007111688.1 NC_019709_p51 NinE protein phrog_288 unknown function unknown function 1 34672 34854
YP_007111661.1 NC_019709_p24 tail fiber phrog_1591 tail fiber protein tail 1 19291 20553
YP_007111663.1 NC_019709_p26 DNA invertase Pin-like protein phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 1 21389 21937
YP_007111685.1 NC_019709_p48 Ren protein phrog_1687 MarR family transcrition regulator transcription regulation 1 33688 33978
YP_007111678.1 NC_019709_p41 hypothetical protein phrog_6603 unknown function unknown function -1 28971 29903
YP_007111673.1 NC_019709_p36 cIII protein phrog_550 CIII anti-termination transcription regulation -1 26895 27170
YP_007111646.1 NC_019709_p9 hypothetical protein phrog_347 tail terminator connector 1 6277 6624
YP_007111650.1 NC_019709_p13 hypothetical protein phrog_5031 unknown function unknown function 1 8154 8342
YP_007111666.1 NC_019709_p29 hypothetical protein phrog_368 unknown function unknown function -1 23690 24145
YP_007111684.1 NC_019709_p47 replication protein DnaC phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 32780 33691
YP_007111656.1 NC_019709_p19 tail assembly protein phrog_32 tail assembly protein tail 1 13782 14390
YP_007111640.1 NC_019709_p3 portal protein phrog_12 portal protein head and packaging 1 2007 3281
YP_007111677.1 NC_019709_p40 antitermination protein N phrog_271 anti-termination protein N-like transcription regulation -1 28155 28490
YP_007111671.1 NC_019709_p34 RecT family recombination protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25594 26505
YP_007111697.1 NC_019709_p60 lysis protein Rz phrog_13 Rz-like spanin lysis 1 38407 38844
YP_007111691.1 NC_019709_p54 hypothetical protein phrog_131 HNH endonuclease DNA, RNA and nucleotide metabolism 1 35739 36029
YP_007111696.1 NC_019709_p59 lysin phrog_90 endolysin lysis 1 37934 38410