Genomic map of Enterobacteria phage vB_EcoS_Rogue1 (NC_019718)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_019718
Definition
Enterobacteria phage vB_EcoS_Rogue1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Rogunavirinae; Rogunavirus.
DB of origin
REFSEQ
Length
45805
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
74
%GC
44.21
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_007112256.1 NC_019718_p54 hypothetical protein phrog_2180 unknown function unknown function 1 37505 37630
YP_007112253.1 NC_019718_p51 hypothetical protein phrog_6031 unknown function unknown function 1 36821 37015
YP_007112214.1 NC_019718_p12 hypothetical protein phrog_10885 unknown function unknown function 1 2917 3111
YP_007112276.1 NC_019718_p74 hypothetical protein phrog_14327 unknown function unknown function -1 45474 45668
YP_007112258.1 NC_019718_p56 hypothetical protein phrog_4596 unknown function unknown function 1 37863 38120
YP_007112227.1 NC_019718_p25 hypothetical protein phrog_302 virion structural protein head and packaging 1 12916 13317
YP_007112237.1 NC_019718_p35 minor tail protein phrog_18 minor tail protein tail 1 19655 20419
YP_007112219.1 NC_019718_p17 portal protein phrog_146 portal protein head and packaging 1 5894 7168
YP_007112203.1 NC_019718_p1 hypothetical protein singleton unknown function unknown function 1 66 260
YP_007112262.1 NC_019718_p60 hypothetical protein phrog_10052 unknown function unknown function 1 39930 40118
YP_007112242.1 NC_019718_p40 hypothetical protein phrog_4281 unknown function unknown function -1 26183 26428
YP_007112231.1 NC_019718_p29 major tail protein phrog_584 major tail protein tail 1 14506 15156
YP_007112209.1 NC_019718_p7 hypothetical protein phrog_16612 unknown function unknown function 1 1619 1735
YP_007112235.1 NC_019718_p33 minor tail protein phrog_14 minor tail protein tail 1 18981 19331
YP_007112224.1 NC_019718_p22 major capsid protein phrog_264 major head protein head and packaging 1 11101 12048
YP_007112267.1 NC_019718_p65 hypothetical protein phrog_2794 unknown function unknown function -1 41516 41851
YP_007112225.1 NC_019718_p23 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 12112 12597
YP_007112233.1 NC_019718_p31 hypothetical protein phrog_680 tail length tape measure protein tail 1 15607 15861
YP_007112269.1 NC_019718_p67 hypothetical protein singleton unknown function unknown function 1 43582 43794
YP_007112216.1 NC_019718_p14 hypothetical protein phrog_2919 unknown function unknown function 1 3479 3664
YP_007112208.1 NC_019718_p6 hypothetical protein phrog_12148 unknown function unknown function 1 1539 1634
YP_007112213.1 NC_019718_p11 fusion protein phrog_303 unknown function unknown function 1 2547 2924
YP_007112254.1 NC_019718_p52 hypothetical protein phrog_2676 unknown function unknown function 1 37015 37233
YP_007112239.1 NC_019718_p37 tail assembly protein phrog_32 tail assembly protein tail 1 21156 21722
YP_007112228.1 NC_019718_p26 hypothetical protein phrog_161 head closure Hc1 connector 1 13314 13682
YP_007112243.1 NC_019718_p41 hypothetical protein phrog_8235 anti-repressor transcription regulation 1 27017 27646
YP_007112272.1 NC_019718_p70 hypothetical protein phrog_12926 unknown function unknown function -1 44525 44827
YP_007112232.1 NC_019718_p30 hypothetical protein phrog_569 tail length tape measure protein tail 1 15230 15544
YP_007112247.1 NC_019718_p45 single-stranded DNA binding protein Ssb phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 29638 30060
YP_007112260.1 NC_019718_p58 hypothetical protein phrog_19819 unknown function unknown function 1 39471 39668
YP_007112275.1 NC_019718_p73 hypothetical protein phrog_9053 unknown function unknown function -1 45305 45484
YP_007112271.1 NC_019718_p69 hypothetical protein phrog_2684 unknown function unknown function -1 44146 44499
YP_007112210.1 NC_019718_p8 hypothetical protein phrog_2452 unknown function unknown function 1 1753 2052
YP_007112246.1 NC_019718_p44 recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28943 29590
YP_007112245.1 NC_019718_p43 exodeoxyribonuclease VIII phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 27918 28886
YP_007112263.1 NC_019718_p61 hypothetical protein phrog_4788 unknown function unknown function 1 40131 40304
YP_007112229.1 NC_019718_p27 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 13675 14103
YP_007112220.1 NC_019718_p18 head morphogenesis protein phrog_324 head morphogenesis head and packaging 1 7128 7892
YP_007112252.1 NC_019718_p50 hypothetical protein phrog_824 unknown function unknown function 1 36373 36762
YP_007112223.1 NC_019718_p21 hypothetical protein phrog_5073 tail fiber protein tail 1 9564 11009
YP_007112249.1 NC_019718_p47 DNA primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism -1 32888 33811
YP_007112238.1 NC_019718_p36 minor tail protein phrog_30 minor tail protein tail 1 20429 21175
YP_007112265.1 NC_019718_p63 endolysin phrog_7 endolysin lysis 1 40634 41116
YP_007112222.1 NC_019718_p20 hypothetical protein phrog_1989 unknown function unknown function 1 9003 9470
YP_007112274.1 NC_019718_p72 hypothetical protein phrog_4448 unknown function unknown function -1 45055 45294
YP_007112270.1 NC_019718_p68 hypothetical protein phrog_926 unknown function unknown function -1 43940 44149
YP_007112217.1 NC_019718_p15 terminase small subunit phrog_606 terminase small subunit head and packaging 1 3764 4279
YP_007112230.1 NC_019718_p28 hypothetical protein phrog_179 tail terminator connector 1 14093 14491
YP_007112240.1 NC_019718_p38 tail fiber phrog_31 central tail fiber J tail 1 21803 25189
YP_007112248.1 NC_019718_p46 tail fiber phrog_4818 tail fiber protein tail -1 30092 32809
YP_007112218.1 NC_019718_p16 terminase large subunit phrog_38 terminase large subunit head and packaging 1 4300 5844
YP_007112259.1 NC_019718_p57 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 38272 39405
YP_007112261.1 NC_019718_p59 hypothetical protein phrog_7411 unknown function unknown function 1 39745 39930
YP_007112212.1 NC_019718_p10 hypothetical protein phrog_11452 unknown function unknown function 1 2250 2543
YP_007112268.1 NC_019718_p66 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 41856 43439
YP_007112257.1 NC_019718_p55 hypothetical protein phrog_2817 unknown function unknown function 1 37627 37866
YP_007112206.1 NC_019718_p4 hypothetical protein singleton unknown function unknown function 1 1103 1189
YP_007112255.1 NC_019718_p53 hypothetical protein phrog_3249 unknown function unknown function 1 37230 37430
YP_007112204.1 NC_019718_p2 hypothetical protein singleton unknown function unknown function 1 420 542
YP_007112250.1 NC_019718_p48 transcriptional regulator phrog_2856 transcriptional regulator transcription regulation -1 33864 34337
YP_007112273.1 NC_019718_p71 hypothetical protein phrog_4548 unknown function unknown function -1 44902 45054
YP_007112234.1 NC_019718_p32 tail tape measure protein phrog_24 tail length tape measure protein tail 1 15896 18949
YP_007112205.1 NC_019718_p3 hypothetical protein phrog_4841 unknown function unknown function 1 561 1103
YP_007112221.1 NC_019718_p19 hypothetical protein phrog_530 head maturation protease head and packaging 1 7882 8991
YP_007112236.1 NC_019718_p34 hypothetical protein singleton unknown function unknown function 1 19404 19535
YP_007112226.1 NC_019718_p24 hypothetical protein phrog_2716 unknown function unknown function 1 12626 12871
YP_007112207.1 NC_019718_p5 hypothetical protein phrog_8335 unknown function unknown function 1 1225 1500
YP_007112241.1 NC_019718_p39 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover -1 25221 26183
YP_007112211.1 NC_019718_p9 hypothetical protein phrog_1312 unknown function unknown function 1 2125 2253
YP_007112251.1 NC_019718_p49 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 34430 36373
YP_007112266.1 NC_019718_p64 Rz1 protein phrog_1804 Rz-like spanin lysis 1 41098 41502
YP_007112215.1 NC_019718_p13 hypothetical protein singleton unknown function unknown function 1 3249 3371
YP_007112264.1 NC_019718_p62 holin phrog_2877 holin lysis 1 40419 40634
YP_007112244.1 NC_019718_p42 hypothetical protein phrog_5247 unknown function unknown function 1 27720 27914