| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_019721 |
Definition |
Enterobacterial phage mEp390, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
40029 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
59 |
%GC |
51.67 |
Number of singletons |
5 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_007112466.1 | NC_019721_p49 | holin | phrog_217 | holin | lysis | 1 | 34844 | 35125 |
| YP_007112463.1 | NC_019721_p46 | late gene regulator Q | phrog_79 | anti-termination protein Q-like | transcription regulation | 1 | 32955 | 33338 |
| YP_007112424.1 | NC_019721_p7 | head-tail connector II | phrog_25 | head closure Hc1 | connector | 1 | 5496 | 5834 |
| YP_007112457.1 | NC_019721_p40 | hypothetical protein | phrog_101 | CII-like transcriptional activator | transcription regulation | 1 | 29435 | 29905 |
| YP_007112469.1 | NC_019721_p52 | hypothetical protein | phrog_1275 | Rz-like spanin | lysis | 1 | 36024 | 36176 |
| YP_007112464.1 | NC_019721_p47 | hypothetical protein | phrog_13899 | unknown function | unknown function | -1 | 33400 | 34218 |
| YP_007112422.1 | NC_019721_p5 | major head subunit | phrog_10 | major head protein | head and packaging | 1 | 3979 | 5136 |
| YP_007112475.1 | NC_019721_p58 | hypothetical protein | phrog_10282 | unknown function | unknown function | 1 | 39643 | 39879 |
| YP_007112462.1 | NC_019721_p45 | hypothetical protein | phrog_96 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 31969 | 32958 |
| YP_007112476.1 | NC_019721_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39872 | 40012 |
| YP_007112418.1 | NC_019721_p1 | terminase small subunit | phrog_5601 | terminase small subunit | head and packaging | 1 | 1 | 486 |
| YP_007112447.1 | NC_019721_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23271 | 23579 |
| YP_007112474.1 | NC_019721_p57 | hypothetical protein | phrog_2323 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39302 | 39643 |
| YP_007112436.1 | NC_019721_p19 | central tail fiber | phrog_31 | central tail fiber J | tail | 1 | 14161 | 17610 |
| YP_007112459.1 | NC_019721_p42 | hypothetical protein | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 30316 | 31269 |
| YP_007112446.1 | NC_019721_p29 | hypothetical protein | phrog_14816 | unknown function | unknown function | -1 | 22935 | 23213 |
| YP_007112448.1 | NC_019721_p31 | EaA protein | phrog_60 | unknown function | unknown function | -1 | 23576 | 24505 |
| YP_007112423.1 | NC_019721_p6 | head-tail connector I | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5170 | 5496 |
| YP_007112430.1 | NC_019721_p13 | tail length tape measure protein | phrog_339 | tail length tape measure protein | tail | 1 | 7928 | 11212 |
| YP_007112437.1 | NC_019721_p20 | hypothetical protein | phrog_557 | outer membrane protein | other | 1 | 17610 | 17912 |
| YP_007112441.1 | NC_019721_p24 | DinI-like family protein | phrog_189 | RecA filament binding protein DinI | DNA, RNA and nucleotide metabolism | -1 | 20396 | 20662 |
| YP_007112428.1 | NC_019721_p11 | tail assembly chaperone | phrog_344 | tail assembly chaperone | tail | 1 | 7205 | 7606 |
| YP_007112431.1 | NC_019721_p14 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 11215 | 11553 |
| YP_007112440.1 | NC_019721_p23 | tail fiber | phrog_1591 | tail fiber protein | tail | 1 | 18992 | 20326 |
| YP_007112454.1 | NC_019721_p37 | prophage repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 27973 | 28629 |
| YP_007112443.1 | NC_019721_p26 | hypothetical protein | phrog_3469 | UmuD-like protein | DNA, RNA and nucleotide metabolism | 1 | 20988 | 21308 |
| YP_007112442.1 | NC_019721_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20782 | 20910 |
| YP_007112445.1 | NC_019721_p28 | excisionase | phrog_1266 | excisionase | integration and excision | -1 | 22674 | 22901 |
| YP_007112472.1 | NC_019721_p55 | hypothetical protein | phrog_3593 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 38222 | 38734 |
| YP_007112432.1 | NC_019721_p15 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 11550 | 12308 |
| YP_007112471.1 | NC_019721_p54 | hypothetical protein | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 36724 | 38181 |
| YP_007112427.1 | NC_019721_p10 | major tail subunit | phrog_158 | major tail protein | tail | 1 | 6680 | 7150 |
| YP_007112434.1 | NC_019721_p17 | hypothetical protein | phrog_890 | lipoprotein | other | 1 | 13014 | 13460 |
| YP_007112449.1 | NC_019721_p32 | hypothetical protein | phrog_19550 | unknown function | unknown function | -1 | 24502 | 25011 |
| YP_007112435.1 | NC_019721_p18 | tail assembly protein | phrog_32 | tail assembly protein | tail | 1 | 13517 | 14107 |
| YP_007112465.1 | NC_019721_p48 | holin | phrog_198 | holin | lysis | 1 | 34462 | 34857 |
| YP_007112458.1 | NC_019721_p41 | hypothetical protein | phrog_1170 | unknown function | unknown function | 1 | 29968 | 30306 |
| YP_007112420.1 | NC_019721_p3 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2007 | 3281 |
| YP_007112439.1 | NC_019721_p22 | Cor protein | phrog_1119 | Cor superinfection exclusion protein | moron, auxiliary metabolic gene and host takeover | 1 | 18701 | 18934 |
| YP_007112433.1 | NC_019721_p16 | minor tail protein | phrog_30 | minor tail protein | tail | 1 | 12310 | 13020 |
| YP_007112473.1 | NC_019721_p56 | hypothetical protein | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 38715 | 39305 |
| YP_007112460.1 | NC_019721_p43 | hypothetical protein | phrog_362 | transcriptional repressor | transcription regulation | 1 | 31266 | 31586 |
| YP_007112470.1 | NC_019721_p53 | hypothetical protein | phrog_9518 | unknown function | unknown function | 1 | 36205 | 36402 |
| YP_007112451.1 | NC_019721_p34 | hypothetical protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 25651 | 26685 |
| YP_007112468.1 | NC_019721_p51 | hypothetical protein | phrog_1026 | Rz-like spanin | lysis | 1 | 35759 | 36034 |
| YP_007112455.1 | NC_019721_p38 | prophage anti-repressor | phrog_35 | transcriptional repressor | transcription regulation | 1 | 28696 | 28926 |
| YP_007112461.1 | NC_019721_p44 | holliday-junction resolvase RusA | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 31583 | 31972 |
| YP_007112419.1 | NC_019721_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 493 | 2007 |
| YP_007112421.1 | NC_019721_p4 | head maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 3299 | 3976 |
| YP_007112467.1 | NC_019721_p50 | lysin | phrog_181 | endolysin | lysis | 1 | 35125 | 35751 |
| YP_007112450.1 | NC_019721_p33 | hypothetical protein | phrog_9763 | unknown function | unknown function | -1 | 25008 | 25664 |
| YP_007112426.1 | NC_019721_p9 | hypothetical protein | phrog_347 | tail terminator | connector | 1 | 6277 | 6624 |
| YP_007112452.1 | NC_019721_p35 | hypothetical protein | phrog_14171 | unknown function | unknown function | -1 | 26685 | 27191 |
| YP_007112453.1 | NC_019721_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27501 | 27743 |
| YP_007112444.1 | NC_019721_p27 | integrase | phrog_1 | integrase | integration and excision | -1 | 21664 | 22674 |
| YP_007112429.1 | NC_019721_p12 | hypothetical protein | phrog_337 | tail protein | tail | 1 | 7630 | 7893 |
| YP_007112438.1 | NC_019721_p21 | hypothetical protein | phrog_425 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 17912 | 18589 |
| YP_007112456.1 | NC_019721_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28963 | 29418 |
| YP_007112425.1 | NC_019721_p8 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 5831 | 6280 |